RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 COX19Q49B96 90 aa9.03□□□□□ -0.96
TRIM40-205ENST00000307859 TM4SF20Q53R12 229 aa9.03□□□□□ -0.96
TRIM40-205ENST00000307859 SAPCD1Q5SSQ6 148 aa9.03□□□□□ -0.96
TRIM40-205ENST00000307859 Q6ZSV7 163 aa9.03□□□□□ -0.96
TRIM40-205ENST00000307859 REC114Q7Z4M0 266 aa9.03□□□□□ -0.96
TRIM40-205ENST00000307859 KLHDC1Q8N7A1 406 aa9.03□□□□□ -0.96
TRIM40-205ENST00000307859 DAZAP1Q96EP5 407 aaKnown RBP9.03□□□□□ -0.96
TRIM40-205ENST00000307859 VGLL1Q99990 258 aa9.03□□□□□ -0.96
TRIM40-205ENST00000307859 RHPN1-AS1Q9BWJ2 59 aa9.03□□□□□ -0.96
TRIM40-205ENST00000307859 UFC1Q9Y3C8 167 aa9.03□□□□□ -0.96
TRIM40-205ENST00000307859 TRAPPC1Q9Y5R8 145 aa9.03□□□□□ -0.96
TRIM40-205ENST00000307859 A8MWL6 223 aa9.02□□□□□ -0.96
TRIM40-205ENST00000307859 A8MWP6 167 aa9.02□□□□□ -0.96
TRIM40-205ENST00000307859 PRAC2D3DTV9 90 aa9.02□□□□□ -0.96
TRIM40-205ENST00000307859 PRB4P10163 310 aaPredicted RBP9.02□□□□□ -0.96
TRIM40-205ENST00000307859 CRIP1P50238 77 aa9.02□□□□□ -0.96
TRIM40-205ENST00000307859 NDUFA6P56556 154 aa9.02□□□□□ -0.96
TRIM40-205ENST00000307859 FABP9Q0Z7S8 132 aa9.02□□□□□ -0.96
TRIM40-205ENST00000307859 NUP35Q8NFH5 326 aa9.02□□□□□ -0.96
TRIM40-205ENST00000307859 C8orf49Q96NF6 230 aa9.02□□□□□ -0.96
TRIM40-205ENST00000307859 PRR25Q96S07 402 aa9.02□□□□□ -0.96
TRIM40-205ENST00000307859 NEU1Q99519 415 aa9.02□□□□□ -0.96
TRIM40-205ENST00000307859 ASCL2Q99929 193 aa9.02□□□□□ -0.96
TRIM40-205ENST00000307859 GFRA4Q9GZZ7 299 aa9.02□□□□□ -0.96
TRIM40-205ENST00000307859 NAT8BQ9UHF3 227 aa9.02□□□□□ -0.96
TRIM40-205ENST00000307859 IGHV4OR15-8A0A075B7B6 117 aa9.02□□□□□ -0.97
TRIM40-205ENST00000307859 A0A087WW49 117 aa9.02□□□□□ -0.97
TRIM40-205ENST00000307859 TMEM213A2RRL7 107 aa9.02□□□□□ -0.97
TRIM40-205ENST00000307859 FAM231BA6NCW3 169 aa9.02□□□□□ -0.97
TRIM40-205ENST00000307859 LGALS9O00182 355 aa9.02□□□□□ -0.97
TRIM40-205ENST00000307859 FRMD6-AS1P0C7T7 363 aa9.02□□□□□ -0.97
TRIM40-205ENST00000307859 HOXA5P20719 270 aa9.02□□□□□ -0.97
TRIM40-205ENST00000307859 CBLN1P23435 193 aa9.02□□□□□ -0.97
TRIM40-205ENST00000307859 WDR73Q6P4I2 378 aa9.02□□□□□ -0.97
TRIM40-205ENST00000307859 RASL11AQ6T310 242 aa9.02□□□□□ -0.97
TRIM40-205ENST00000307859 WIPF2Q8TF74 440 aaPredicted RBP9.02□□□□□ -0.97
TRIM40-205ENST00000307859 C16orf92Q96LL3 132 aa9.02□□□□□ -0.97
TRIM40-205ENST00000307859 GNB1LQ9BYB4 327 aa9.02□□□□□ -0.97
TRIM40-205ENST00000307859 HIGD1CA8MV81 97 aa9.01□□□□□ -0.97
TRIM40-205ENST00000307859 MT-ND6P03923 174 aa9.01□□□□□ -0.97
TRIM40-205ENST00000307859 RNASE1P07998 156 aaKnown RBP9.01□□□□□ -0.97
TRIM40-205ENST00000307859 CT45A10P0DMU9 189 aa9.01□□□□□ -0.97
TRIM40-205ENST00000307859 BMI1P35226 326 aa9.01□□□□□ -0.97
TRIM40-205ENST00000307859 Q8TAT8 98 aa9.01□□□□□ -0.97
TRIM40-205ENST00000307859 NRN1Q9NPD7 142 aa9.01□□□□□ -0.97
TRIM40-205ENST00000307859 SNURFLB1AK76 121 aa9□□□□□ -0.97
TRIM40-205ENST00000307859 SPINK4O60575 86 aa9□□□□□ -0.97
TRIM40-205ENST00000307859 EDN2P20800 178 aa9□□□□□ -0.97
TRIM40-205ENST00000307859 CDX1P47902 265 aaPredicted RBP9□□□□□ -0.97
TRIM40-205ENST00000307859 TCTEX1D4Q5JR98 221 aa9□□□□□ -0.97
TRIM40-205ENST00000307859 COA6Q5JTJ3 125 aaKnown RBP9□□□□□ -0.97
TRIM40-205ENST00000307859 MRPL54Q6P161 138 aaKnown RBP9□□□□□ -0.97
TRIM40-205ENST00000307859 TMEM136Q6ZRR5 245 aa9□□□□□ -0.97
TRIM40-205ENST00000307859 C9orf47Q6ZRZ4 202 aa9□□□□□ -0.97
TRIM40-205ENST00000307859 ATP5L2Q7Z4Y8 100 aa9□□□□□ -0.97
TRIM40-205ENST00000307859 OR2D3Q8NGH3 330 aa9□□□□□ -0.97
TRIM40-205ENST00000307859 GTSF1Q8WW33 167 aa9□□□□□ -0.97
TRIM40-205ENST00000307859 C20orf173Q96LM9 149 aa9□□□□□ -0.97
TRIM40-205ENST00000307859 NDFIP1Q9BT67 221 aa9□□□□□ -0.97
TRIM40-205ENST00000307859 MRPL18Q9H0U6 180 aaKnown RBP9□□□□□ -0.97
TRIM40-205ENST00000307859 PPP1R14DQ9NXH3 145 aa9□□□□□ -0.97
TRIM40-205ENST00000307859 CUBNO60494 3623 aa8.99□□□□□ -0.97
TRIM40-205ENST00000307859 A0A1B0GXF2 115 aa8.99□□□□□ -0.97
TRIM40-205ENST00000307859 HOXD3P31249 432 aaPredicted RBP8.99□□□□□ -0.97
TRIM40-205ENST00000307859 FOXA3P55318 350 aaPredicted RBP8.99□□□□□ -0.97
TRIM40-205ENST00000307859 ERCC8Q13216 396 aa8.99□□□□□ -0.97
TRIM40-205ENST00000307859 FAM162BQ5T6X4 162 aa8.99□□□□□ -0.97
TRIM40-205ENST00000307859 TCF24Q7RTU0 167 aa8.99□□□□□ -0.97
TRIM40-205ENST00000307859 C4orf3Q8WVX3 66 aa8.99□□□□□ -0.97
TRIM40-205ENST00000307859 GPR61Q9BZJ8 451 aa8.99□□□□□ -0.97
TRIM40-205ENST00000307859 SH2D1AO60880 128 aa8.98□□□□□ -0.97
TRIM40-205ENST00000307859 HLA-DQA1P01909 254 aa8.98□□□□□ -0.97
TRIM40-205ENST00000307859 SAMD13Q5VXD3 122 aa8.98□□□□□ -0.97
TRIM40-205ENST00000307859 RBPMS2Q6ZRY4 209 aaKnown RBP8.98□□□□□ -0.97
TRIM40-205ENST00000307859 WFDC12Q8WWY7 111 aa8.98□□□□□ -0.97
TRIM40-205ENST00000307859 AGPAT4-IT1Q9H0P7 198 aa8.98□□□□□ -0.97
TRIM40-205ENST00000307859 SRD5A1P18405 259 aa8.98□□□□□ -0.97
TRIM40-205ENST00000307859 ZNF80P51504 273 aaPredicted RBP8.98□□□□□ -0.97
TRIM40-205ENST00000307859 ZNF138P52744 262 aa8.98□□□□□ -0.97
TRIM40-205ENST00000307859 SYNJ2BPP57105 145 aa8.98□□□□□ -0.97
TRIM40-205ENST00000307859 HILS1P60008 231 aa8.98□□□□□ -0.97
TRIM40-205ENST00000307859 SRSF2Q01130 221 aaKnown RBP8.98□□□□□ -0.97
TRIM40-205ENST00000307859 KLF5Q13887 457 aaPredicted RBP8.98□□□□□ -0.97
TRIM40-205ENST00000307859 C18orf65Q6ZTR6 163 aa8.98□□□□□ -0.97
TRIM40-205ENST00000307859 ZNF738Q8NE65 137 aa8.98□□□□□ -0.97
TRIM40-205ENST00000307859 C16orf95Q9H693 158 aa8.98□□□□□ -0.97
TRIM40-205ENST00000307859 XKRY2A2RUG3 117 aa8.97□□□□□ -0.97
TRIM40-205ENST00000307859 IFITM10A6NMD0 228 aa8.97□□□□□ -0.97
TRIM40-205ENST00000307859 OVOL1O14753 267 aa8.97□□□□□ -0.97
TRIM40-205ENST00000307859 GZMBP10144 247 aa8.97□□□□□ -0.97
TRIM40-205ENST00000307859 AKR1D1P51857 326 aa8.97□□□□□ -0.97
TRIM40-205ENST00000307859 RPL11P62913 178 aaKnown RBP8.97□□□□□ -0.97
TRIM40-205ENST00000307859 TMEM78Q5T7P6 136 aa8.97□□□□□ -0.97
TRIM40-205ENST00000307859 HIST3H2BBQ8N257 126 aa8.97□□□□□ -0.97
TRIM40-205ENST00000307859 ZNF418Q8TF45 676 aaPredicted RBP8.97□□□□□ -0.97
TRIM40-205ENST00000307859 LENEPQ9Y5L5 61 aa8.97□□□□□ -0.97
TRIM40-205ENST00000307859 C2orf70A6NJV1 201 aa8.96□□□□□ -0.98
TRIM40-205ENST00000307859 LINC01619G3V211 115 aa8.96□□□□□ -0.98
TRIM40-205ENST00000307859 GDF5OSQ5U4N7 250 aa8.96□□□□□ -0.98
TRIM40-205ENST00000307859 GFI1BQ5VTD9 330 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms