RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 DKK1O94907 266 aa6.74□□□□□ -1.33
PCDHB1-201ENST00000306549 IGKV2D-40P01614 121 aaPredicted RBP6.74□□□□□ -1.33
PCDHB1-201ENST00000306549 PRB3Q04118 309 aaPredicted RBP6.74□□□□□ -1.33
PCDHB1-201ENST00000306549 NEGR1Q7Z3B1 354 aa6.74□□□□□ -1.33
PCDHB1-201ENST00000306549 ST6GALNAC6Q969X2 333 aa6.74□□□□□ -1.33
PCDHB1-201ENST00000306549 PMS2P5A8MQ11 134 aa6.74□□□□□ -1.33
PCDHB1-201ENST00000306549 MPTX1A8MV57 137 aa6.74□□□□□ -1.33
PCDHB1-201ENST00000306549 SOCS3O14543 225 aa6.74□□□□□ -1.33
PCDHB1-201ENST00000306549 COL8A2P25067 703 aa6.74□□□□□ -1.33
PCDHB1-201ENST00000306549 CD177Q8N6Q3 437 aa6.74□□□□□ -1.33
PCDHB1-201ENST00000306549 CSTL1Q9H114 145 aa6.74□□□□□ -1.33
PCDHB1-201ENST00000306549 SSBP2P81877 361 aaPredicted RBP6.74□□□□□ -1.33
PCDHB1-201ENST00000306549 PYYP10082 97 aa6.73□□□□□ -1.33
PCDHB1-201ENST00000306549 SYNJ2BPP57105 145 aa6.73□□□□□ -1.33
PCDHB1-201ENST00000306549 ANXA2RQ3ZCQ2 193 aa6.73□□□□□ -1.33
PCDHB1-201ENST00000306549 DEFB131AP59861 70 aa6.73□□□□□ -1.33
PCDHB1-201ENST00000306549 LAMTOR2Q9Y2Q5 125 aa6.73□□□□□ -1.33
PCDHB1-201ENST00000306549 SPANXA1Q9NS26 97 aa6.73□□□□□ -1.33
PCDHB1-201ENST00000306549 DSCR8Q96T75 97 aa6.73□□□□□ -1.33
PCDHB1-201ENST00000306549 RTBDNQ9BSG5 229 aaPredicted RBP6.73□□□□□ -1.33
PCDHB1-201ENST00000306549 LIME1Q9H400 295 aa6.73□□□□□ -1.33
PCDHB1-201ENST00000306549 ZNF319Q9P2F9 582 aa6.73□□□□□ -1.33
PCDHB1-201ENST00000306549 SRSF2Q01130 221 aaKnown RBP6.73□□□□□ -1.33
PCDHB1-201ENST00000306549 KLRD1Q13241 179 aa6.73□□□□□ -1.33
PCDHB1-201ENST00000306549 A8MXK9 166 aa6.73□□□□□ -1.33
PCDHB1-201ENST00000306549 SIGMAR1Q99720 223 aa6.73□□□□□ -1.33
PCDHB1-201ENST00000306549 SAMD5Q5TGI4 173 aa6.72□□□□□ -1.33
PCDHB1-201ENST00000306549 RPL23P62829 140 aaKnown RBP6.72□□□□□ -1.33
PCDHB1-201ENST00000306549 PMVKQ15126 192 aa6.72□□□□□ -1.33
PCDHB1-201ENST00000306549 TCTEX1D4Q5JR98 221 aa6.72□□□□□ -1.33
PCDHB1-201ENST00000306549 UBL5Q9BZL1 73 aa6.72□□□□□ -1.33
PCDHB1-201ENST00000306549 SHISA9B4DS77 424 aa6.72□□□□□ -1.33
PCDHB1-201ENST00000306549 SRP19P09132 144 aaKnown RBP6.72□□□□□ -1.33
PCDHB1-201ENST00000306549 ZNF329Q86UD4 541 aa6.72□□□□□ -1.33
PCDHB1-201ENST00000306549 TMEM243Q9BU79 118 aa6.72□□□□□ -1.33
PCDHB1-201ENST00000306549 TRAV25A0A0B4J276 109 aa6.72□□□□□ -1.33
PCDHB1-201ENST00000306549 RAMP3O60896 148 aa6.72□□□□□ -1.33
PCDHB1-201ENST00000306549 LHFPL1Q86WI0 220 aa6.72□□□□□ -1.33
PCDHB1-201ENST00000306549 ZNF625Q96I27 306 aaPredicted RBP6.72□□□□□ -1.33
PCDHB1-201ENST00000306549 SPANXDQ9BXN6 97 aa6.72□□□□□ -1.33
PCDHB1-201ENST00000306549 MEGF9Q9H1U4 602 aa6.72□□□□□ -1.33
PCDHB1-201ENST00000306549 AZU1P20160 251 aa6.72□□□□□ -1.33
PCDHB1-201ENST00000306549 ZNF833PQ6ZTB9 187 aa6.72□□□□□ -1.33
PCDHB1-201ENST00000306549 H2BFSP57053 126 aa6.72□□□□□ -1.33
PCDHB1-201ENST00000306549 NDPQ00604 133 aa6.72□□□□□ -1.33
PCDHB1-201ENST00000306549 ID3Q02535 119 aa6.72□□□□□ -1.33
PCDHB1-201ENST00000306549 CENPFP49454 3210 aa6.71□□□□□ -1.33
PCDHB1-201ENST00000306549 PSG3Q16557 428 aa6.71□□□□□ -1.33
PCDHB1-201ENST00000306549 GAGE2AQ6NT46 116 aa6.71□□□□□ -1.33
PCDHB1-201ENST00000306549 TMEM89A2RUT3 159 aa6.71□□□□□ -1.33
PCDHB1-201ENST00000306549 FNDC4Q9H6D8 234 aaPredicted RBP6.71□□□□□ -1.34
PCDHB1-201ENST00000306549 SERF1AO75920 110 aa6.71□□□□□ -1.34
PCDHB1-201ENST00000306549 IL17DQ8TAD2 202 aa6.71□□□□□ -1.34
PCDHB1-201ENST00000306549 PRRC2CQ9Y520 2896 aaKnown RBP6.71□□□□□ -1.34
PCDHB1-201ENST00000306549 F8VVB4 439 aa6.71□□□□□ -1.34
PCDHB1-201ENST00000306549 F8VWA3 439 aa6.71□□□□□ -1.34
PCDHB1-201ENST00000306549 FOXG1P55316 489 aaPredicted RBP6.71□□□□□ -1.34
PCDHB1-201ENST00000306549 OR11H6Q8NGC7 330 aa6.71□□□□□ -1.34
PCDHB1-201ENST00000306549 PKD1L2Q7Z442 2459 aa6.71□□□□□ -1.34
PCDHB1-201ENST00000306549 TRAV8-1A0A0A6YYK1 113 aa6.71□□□□□ -1.34
PCDHB1-201ENST00000306549 XCL2Q9UBD3 114 aa6.71□□□□□ -1.34
PCDHB1-201ENST00000306549 PCSK5Q92824 1860 aa6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 D6R8Y8 96 aa6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 YPEL3P61236 119 aaPredicted RBP6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 RNF152Q8N8N0 203 aa6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 IGKV1-27A0A075B6S5 117 aa6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 TRAV8-3A0A0A6YYJ7 113 aa6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 IGKV1-12A0A0C4DH73 117 aa6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 IGKV1D-12P01611 117 aa6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 OCIAD2Q56VL3 154 aa6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 RPRMLQ8N4K4 120 aa6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 SCRT1Q9BWW7 348 aa6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 hADV29S1A0JD25 119 aa6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 TCRAP04437 139 aa6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 KLF17Q5JT82 389 aaPredicted RBP6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 C14orf178Q8N769 122 aaPredicted RBP6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 Q8NFD4 153 aa6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 TMEM14BQ9NUH8 114 aa6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 KLK5Q9Y337 293 aaPredicted RBP6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 OVOL3O00110 214 aa6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 LOXL1Q08397 574 aaPredicted RBP6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 TMEM170AQ8WVE7 144 aa6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 SPXQ9BT56 116 aa6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 NDUFA4O00483 81 aa6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 SH2D1AO60880 128 aa6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 LAIR2Q6ISS4 152 aa6.7□□□□□ -1.34
PCDHB1-201ENST00000306549 GAGE12JA6NER3 117 aa6.69□□□□□ -1.34
PCDHB1-201ENST00000306549 ADMP35318 185 aa6.69□□□□□ -1.34
PCDHB1-201ENST00000306549 CCL18P55774 89 aa6.69□□□□□ -1.34
PCDHB1-201ENST00000306549 GAGE1Q13065 139 aa6.69□□□□□ -1.34
PCDHB1-201ENST00000306549 GAGE4Q13068 117 aa6.69□□□□□ -1.34
PCDHB1-201ENST00000306549 GAGE5Q13069 117 aa6.69□□□□□ -1.34
PCDHB1-201ENST00000306549 C9orf66Q5T8R8 295 aa6.69□□□□□ -1.34
PCDHB1-201ENST00000306549 MRPL27Q9P0M9 148 aaKnown RBP6.69□□□□□ -1.34
PCDHB1-201ENST00000306549 CHKB-CPT1BH3BT56 60 aa6.69□□□□□ -1.34
PCDHB1-201ENST00000306549 I3L3M4 83 aa6.69□□□□□ -1.34
PCDHB1-201ENST00000306549 INSL3P51460 131 aa6.69□□□□□ -1.34
PCDHB1-201ENST00000306549 TMEM141Q96I45 108 aa6.69□□□□□ -1.34
PCDHB1-201ENST00000306549 LYZL1Q6UWQ5 148 aa6.69□□□□□ -1.34
PCDHB1-201ENST00000306549 EXOC3-AS1Q8N2X6 119 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms