RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 IFI27L1Q96BM0 104 aa10.55□□□□□ -0.72
CTTN-201ENST00000301843 C21orf62Q9NYP8 219 aa10.55□□□□□ -0.72
CTTN-201ENST00000301843 SMAD5-AS1Q9Y6J3 95 aa10.55□□□□□ -0.72
CTTN-201ENST00000301843 KIR3DS1Q14943 382 aa10.54□□□□□ -0.72
CTTN-201ENST00000301843 ECSCRQ19T08 205 aa10.54□□□□□ -0.72
CTTN-201ENST00000301843 FER1L6-AS1Q8NA97 138 aa10.54□□□□□ -0.72
CTTN-201ENST00000301843 AP1S3Q96PC3 154 aa10.54□□□□□ -0.72
CTTN-201ENST00000301843 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.54□□□□□ -0.722e-9■■■■□ 25
CTTN-201ENST00000301843 FBLL1A6NHQ2 334 aaKnown RBP10.54□□□□□ -0.72
CTTN-201ENST00000301843 B9A039 149 aa10.54□□□□□ -0.72
CTTN-201ENST00000301843 K7ERJ3 54 aa10.54□□□□□ -0.72
CTTN-201ENST00000301843 NDUFS7O75251 213 aa10.54□□□□□ -0.72
CTTN-201ENST00000301843 MEGF9Q9H1U4 602 aa10.54□□□□□ -0.72
CTTN-201ENST00000301843 CELSR2Q9HCU4 2923 aa10.54□□□□□ -0.72
CTTN-201ENST00000301843 WI2-2373I1.2A0A1W2PRP0 233 aa10.53□□□□□ -0.72
CTTN-201ENST00000301843 MFAP4P55083 255 aa10.53□□□□□ -0.72
CTTN-201ENST00000301843 C5orf64Q2M2E5 130 aa10.53□□□□□ -0.72
CTTN-201ENST00000301843 CFHR4Q92496 578 aa10.53□□□□□ -0.72
CTTN-201ENST00000301843 PEF1Q9UBV8 284 aaKnown RBP10.53□□□□□ -0.72
CTTN-201ENST00000301843 HBDP02042 147 aa10.53□□□□□ -0.72
CTTN-201ENST00000301843 ARPC1AQ92747 370 aa10.53□□□□□ -0.72
CTTN-201ENST00000301843 TNFRSF14Q92956 283 aa10.53□□□□□ -0.72
CTTN-201ENST00000301843 AGRNO00468 2067 aa10.53□□□□□ -0.72
CTTN-201ENST00000301843 HIVEP3Q5T1R4 2406 aa10.53□□□□□ -0.72
CTTN-201ENST00000301843 IGHG4P01861 327 aa10.53□□□□□ -0.72
CTTN-201ENST00000301843 LEPP41159 167 aa10.53□□□□□ -0.72
CTTN-201ENST00000301843 IL17RELQ6ZVW7 336 aa10.53□□□□□ -0.72
CTTN-201ENST00000301843 PRSS1P07477 247 aa10.52□□□□□ -0.72
CTTN-201ENST00000301843 GCSHP23434 173 aa10.52□□□□□ -0.72
CTTN-201ENST00000301843 ZNF575Q86XF7 245 aa10.52□□□□□ -0.72
CTTN-201ENST00000301843 LINC00527Q9UJ94 153 aa10.52□□□□□ -0.72
CTTN-201ENST00000301843 A1L4Q6 167 aa10.52□□□□□ -0.73
CTTN-201ENST00000301843 IGLV11-55A0A075B6I3 123 aa10.52□□□□□ -0.73
CTTN-201ENST00000301843 TRGV3P03979 118 aa10.52□□□□□ -0.73
CTTN-201ENST00000301843 DEFB1P60022 68 aa10.52□□□□□ -0.73
CTTN-201ENST00000301843 SAPCD1Q5SSQ6 148 aa10.52□□□□□ -0.73
CTTN-201ENST00000301843 GTSCR1Q86UQ5 136 aa10.52□□□□□ -0.73
CTTN-201ENST00000301843 LINC01548A6NM66 108 aa10.51□□□□□ -0.73
CTTN-201ENST00000301843 SMAD7O15105 426 aaKnown RBP10.51□□□□□ -0.73
CTTN-201ENST00000301843 CTSGP08311 255 aa10.51□□□□□ -0.73
CTTN-201ENST00000301843 VKORC1Q9BQB6 163 aa10.51□□□□□ -0.73
CTTN-201ENST00000301843 COTL1Q14019 142 aa10.51□□□□□ -0.73
CTTN-201ENST00000301843 CCL21O00585 134 aa10.5□□□□□ -0.73
CTTN-201ENST00000301843 ZNF493Q6ZR52 646 aa10.5□□□□□ -0.73
CTTN-201ENST00000301843 UFC1Q9Y3C8 167 aa10.5□□□□□ -0.73
CTTN-201ENST00000301843 A0A0G2JLM5 398 aa10.5□□□□□ -0.73
CTTN-201ENST00000301843 G3V318 75 aa10.5□□□□□ -0.73
CTTN-201ENST00000301843 K7ENP7 123 aa10.5□□□□□ -0.73
CTTN-201ENST00000301843 FOXC1Q12948 553 aa10.5□□□□□ -0.73
CTTN-201ENST00000301843 BOD1L2Q8IYS8 172 aa10.5□□□□□ -0.73
CTTN-201ENST00000301843 FOXC2Q99958 501 aa10.5□□□□□ -0.73
CTTN-201ENST00000301843 KLK15Q9H2R5 256 aa10.5□□□□□ -0.73
CTTN-201ENST00000301843 CLEC3BP05452 202 aa10.49□□□□□ -0.73
CTTN-201ENST00000301843 FXYD2P54710 66 aa10.49□□□□□ -0.73
CTTN-201ENST00000301843 MTURNQ8N3F0 131 aa10.49□□□□□ -0.73
CTTN-201ENST00000301843 RNF185Q96GF1 192 aa10.49□□□□□ -0.73
CTTN-201ENST00000301843 C11orf21Q9P2W6 132 aa10.49□□□□□ -0.73
CTTN-201ENST00000301843 CSMD2Q7Z408 3487 aa10.49□□□□□ -0.73
CTTN-201ENST00000301843 LYPD1Q8N2G4 141 aa10.49□□□□□ -0.73
CTTN-201ENST00000301843 IGHV3OR16-10A0A075B7F0 116 aa10.48□□□□□ -0.73
CTTN-201ENST00000301843 C15orf32Q32M92 178 aa10.48□□□□□ -0.73
CTTN-201ENST00000301843 LGALS9BQ3B8N2 356 aa10.48□□□□□ -0.73
CTTN-201ENST00000301843 LGALS9CQ6DKI2 356 aa10.48□□□□□ -0.73
CTTN-201ENST00000301843 LCNL1Q6ZST4 164 aa10.48□□□□□ -0.73
CTTN-201ENST00000301843 VMO1Q7Z5L0 202 aa10.48□□□□□ -0.73
CTTN-201ENST00000301843 TMEM158Q8WZ71 300 aa10.48□□□□□ -0.73
CTTN-201ENST00000301843 TMEM160Q9NX00 188 aa10.48□□□□□ -0.73
CTTN-201ENST00000301843 SORL1Q92673 2214 aa10.48□□□□□ -0.73
CTTN-201ENST00000301843 CSPG4Q6UVK1 2322 aa10.48□□□□□ -0.73
CTTN-201ENST00000301843 TNFRSF6BO95407 300 aa10.48□□□□□ -0.73
CTTN-201ENST00000301843 RPL7P18124 248 aaKnown RBP10.48□□□□□ -0.73
CTTN-201ENST00000301843 Q6AWC8 147 aa10.48□□□□□ -0.73
CTTN-201ENST00000301843 ADAMTSL5Q6ZMM2 481 aa10.48□□□□□ -0.73
CTTN-201ENST00000301843 CREBBPQ92793 2442 aa10.48□□□□□ -0.73
CTTN-201ENST00000301843 IGKV3-7A0A075B6H7 116 aa10.48□□□□□ -0.73
CTTN-201ENST00000301843 ZFP36P26651 326 aaKnown RBP10.48□□□□□ -0.73
CTTN-201ENST00000301843 PAX2Q02962 417 aa10.48□□□□□ -0.73
CTTN-201ENST00000301843 PAX8Q06710 450 aa10.48□□□□□ -0.73
CTTN-201ENST00000301843 CLEC19AQ6UXS0 136 aa10.48□□□□□ -0.73
CTTN-201ENST00000301843 RAB1BQ9H0U4 201 aa10.48□□□□□ -0.73
CTTN-201ENST00000301843 U3KQK5 164 aa10.48□□□□□ -0.73
CTTN-201ENST00000301843 DOPEY2Q9Y3R5 2298 aa10.48□□□□□ -0.73
CTTN-201ENST00000301843 TRBV6-1A0A0K0K1D8 114 aa10.47□□□□□ -0.73
CTTN-201ENST00000301843 C9orf118A6NHY6 69 aa10.47□□□□□ -0.73
CTTN-201ENST00000301843 IGF1P05019 195 aa10.47□□□□□ -0.73
CTTN-201ENST00000301843 EFNA4P52798 201 aa10.47□□□□□ -0.73
CTTN-201ENST00000301843 ZNF562Q6V9R5 426 aa10.47□□□□□ -0.73
CTTN-201ENST00000301843 CENPEQ02224 2701 aa10.47□□□□□ -0.73
CTTN-201ENST00000301843 A0A1B0GW15 77 aa10.46□□□□□ -0.73
CTTN-201ENST00000301843 SEC11AP67812 179 aa10.46□□□□□ -0.73
CTTN-201ENST00000301843 OR2K2Q8NGT1 345 aa10.46□□□□□ -0.73
CTTN-201ENST00000301843 MAP1LC3AQ9H492 121 aa10.46□□□□□ -0.73
CTTN-201ENST00000301843 SPCS1Q9Y6A9 102 aa10.46□□□□□ -0.73
CTTN-201ENST00000301843 IGHV7-81A0A0B4J1V7 117 aa10.46□□□□□ -0.73
CTTN-201ENST00000301843 A6NDN8 102 aa10.46□□□□□ -0.73
CTTN-201ENST00000301843 NDUFA3O95167 84 aa10.46□□□□□ -0.73
CTTN-201ENST00000301843 GOSR1O95249 250 aa10.46□□□□□ -0.73
CTTN-201ENST00000301843 IGLC6P0CF74 106 aa10.46□□□□□ -0.73
CTTN-201ENST00000301843 DTX2Q86UW9 622 aa10.46□□□□□ -0.73
CTTN-201ENST00000301843 SPOCK3Q9BQ16 436 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms