RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 DYNLRB1Q9NP97 96 aa8.04□□□□□ -1.12
LMX1A-201ENST00000294816 SH3BGRL2Q9UJC5 107 aa8.04□□□□□ -1.12
LMX1A-201ENST00000294816 K7EIM0 57 aa8.04□□□□□ -1.12
LMX1A-201ENST00000294816 PRRG2O14669 202 aa8.04□□□□□ -1.12
LMX1A-201ENST00000294816 NXT2Q9NPJ8 142 aaKnown RBP8.04□□□□□ -1.12
LMX1A-201ENST00000294816 ATP5LO75964 103 aa8.03□□□□□ -1.12
LMX1A-201ENST00000294816 CYSLTR1Q9Y271 337 aa8.03□□□□□ -1.12
LMX1A-201ENST00000294816 ZGRF1Q86YA3 2104 aa8.03□□□□□ -1.12
LMX1A-201ENST00000294816 TRAV26-2A0A0B4J265 109 aa8.03□□□□□ -1.12
LMX1A-201ENST00000294816 NCBP2LA6PVI3 153 aaKnown RBP8.03□□□□□ -1.12
LMX1A-201ENST00000294816 PRSS47A8MTI9 375 aa8.03□□□□□ -1.12
LMX1A-201ENST00000294816 CD59P13987 128 aa8.03□□□□□ -1.12
LMX1A-201ENST00000294816 EFNA4P52798 201 aa8.03□□□□□ -1.12
LMX1A-201ENST00000294816 ERCC8Q13216 396 aa8.03□□□□□ -1.12
LMX1A-201ENST00000294816 HES1Q14469 280 aa8.03□□□□□ -1.12
LMX1A-201ENST00000294816 PVRIGQ6DKI7 326 aa8.03□□□□□ -1.12
LMX1A-201ENST00000294816 RNF185Q96GF1 192 aa8.03□□□□□ -1.12
LMX1A-201ENST00000294816 TM2D2Q9BX73 214 aa8.03□□□□□ -1.12
LMX1A-201ENST00000294816 LOC107984156A0A0G2JMH3 177 aa8.02□□□□□ -1.12
LMX1A-201ENST00000294816 MBD3L4A6NDZ8 208 aaPredicted RBP8.02□□□□□ -1.12
LMX1A-201ENST00000294816 MBD3L3A6NE82 208 aaPredicted RBP8.02□□□□□ -1.12
LMX1A-201ENST00000294816 MBD3L5A6NJ08 208 aaPredicted RBP8.02□□□□□ -1.12
LMX1A-201ENST00000294816 TMEM155Q4W5P6 130 aa8.02□□□□□ -1.12
LMX1A-201ENST00000294816 ARL17AQ8IVW1 177 aa8.02□□□□□ -1.12
LMX1A-201ENST00000294816 MBD3L2Q8NHZ7 208 aaPredicted RBP8.02□□□□□ -1.12
LMX1A-201ENST00000294816 ZNF418Q8TF45 676 aaPredicted RBP8.02□□□□□ -1.12
LMX1A-201ENST00000294816 SMG1Q96Q15 3661 aaKnown RBP8.02□□□□□ -1.13
LMX1A-201ENST00000294816 KALRNO60229 2985 aa8.02□□□□□ -1.13
LMX1A-201ENST00000294816 ADIPOQQ15848 244 aa8.02□□□□□ -1.13
LMX1A-201ENST00000294816 GEMIN7Q9H840 131 aaKnown RBP8.02□□□□□ -1.13
LMX1A-201ENST00000294816 SYT8Q8NBV8 401 aa8.02□□□□□ -1.13
LMX1A-201ENST00000294816 CACNA1BQ00975 2339 aa8.01□□□□□ -1.13
LMX1A-201ENST00000294816 CRYGBP07316 175 aa8.01□□□□□ -1.13
LMX1A-201ENST00000294816 RRN3P1Q2M238 152 aa8.01□□□□□ -1.13
LMX1A-201ENST00000294816 GFRALQ6UXV0 394 aa8.01□□□□□ -1.13
LMX1A-201ENST00000294816 SPATA25Q9BR10 227 aa8.01□□□□□ -1.13
LMX1A-201ENST00000294816 MRPL16Q9NX20 251 aaKnown RBP8.01□□□□□ -1.13
LMX1A-201ENST00000294816 FAM215AQ9Y5M1 114 aa8.01□□□□□ -1.13
LMX1A-201ENST00000294816 LYNX1G3V0Z9 82 aa8.01□□□□□ -1.13
LMX1A-201ENST00000294816 TGFAP01135 160 aa8.01□□□□□ -1.13
LMX1A-201ENST00000294816 LYNX1P0DP58 116 aa8.01□□□□□ -1.13
LMX1A-201ENST00000294816 CRYBA4P53673 196 aa8.01□□□□□ -1.13
LMX1A-201ENST00000294816 DTX2Q86UW9 622 aa8.01□□□□□ -1.13
LMX1A-201ENST00000294816 PGPEP1Q9NXJ5 209 aa8.01□□□□□ -1.13
LMX1A-201ENST00000294816 SMPXQ9UHP9 88 aa8.01□□□□□ -1.13
LMX1A-201ENST00000294816 PSMB2P49721 201 aa8.01□□□□□ -1.13
LMX1A-201ENST00000294816 ZMAT4Q9H898 229 aa8.01□□□□□ -1.13
LMX1A-201ENST00000294816 MUC3AQ02505 3323 aa8□□□□□ -1.13
LMX1A-201ENST00000294816 IGHV3OR16-13A0A075B7E8 117 aa8□□□□□ -1.13
LMX1A-201ENST00000294816 IGHV3-74A0A0B4J1X5 117 aa8□□□□□ -1.13
LMX1A-201ENST00000294816 FABP5P3A8MUU1 101 aa8□□□□□ -1.13
LMX1A-201ENST00000294816 OR11H12B2RN74 326 aa8□□□□□ -1.13
LMX1A-201ENST00000294816 MRPS12O15235 138 aaKnown RBP8□□□□□ -1.13
LMX1A-201ENST00000294816 TRGV3P03979 118 aa8□□□□□ -1.13
LMX1A-201ENST00000294816 BSPH1Q075Z2 132 aa8□□□□□ -1.13
LMX1A-201ENST00000294816 OR11H1Q8NG94 326 aa8□□□□□ -1.13
LMX1A-201ENST00000294816 OR11H2Q8NH07 326 aa8□□□□□ -1.13
LMX1A-201ENST00000294816 IGHV3-66A0A0C4DH42 116 aa8□□□□□ -1.13
LMX1A-201ENST00000294816 BUB1B-PAK6H3BSN5 160 aa8□□□□□ -1.13
LMX1A-201ENST00000294816 TIMM23O14925 209 aa8□□□□□ -1.13
LMX1A-201ENST00000294816 CEACAM4O75871 244 aa8□□□□□ -1.13
LMX1A-201ENST00000294816 SPINK8P0C7L1 97 aa8□□□□□ -1.13
LMX1A-201ENST00000294816 IGLC6P0CF74 106 aa8□□□□□ -1.13
LMX1A-201ENST00000294816 RPL7P18124 248 aaKnown RBP8□□□□□ -1.13
LMX1A-201ENST00000294816 DLX6P56179 175 aa8□□□□□ -1.13
LMX1A-201ENST00000294816 PSMG4Q5JS54 123 aa8□□□□□ -1.13
LMX1A-201ENST00000294816 MRAP2Q96G30 205 aa8□□□□□ -1.13
LMX1A-201ENST00000294816 COL27A1Q8IZC6 1860 aaPredicted RBP7.99□□□□□ -1.13
LMX1A-201ENST00000294816 SHISA9B4DS77 424 aa7.99□□□□□ -1.13
LMX1A-201ENST00000294816 ZNF883P0CG24 379 aa7.99□□□□□ -1.13
LMX1A-201ENST00000294816 MFAP4P55083 255 aa7.99□□□□□ -1.13
LMX1A-201ENST00000294816 PDE6HQ13956 83 aa7.99□□□□□ -1.13
LMX1A-201ENST00000294816 SCGB1D4Q6XE38 83 aa7.99□□□□□ -1.13
LMX1A-201ENST00000294816 ZNF502Q8TBZ5 544 aa7.99□□□□□ -1.13
LMX1A-201ENST00000294816 GLMPQ8WWB7 406 aa7.99□□□□□ -1.13
LMX1A-201ENST00000294816 ONECUT1Q9UBC0 465 aa7.99□□□□□ -1.13
LMX1A-201ENST00000294816 EP300Q09472 2414 aaPredicted RBP7.99□□□□□ -1.13
LMX1A-201ENST00000294816 HOXA3O43365 443 aaPredicted RBP7.99□□□□□ -1.13
LMX1A-201ENST00000294816 ASCL5Q7RTU5 278 aa7.99□□□□□ -1.13
LMX1A-201ENST00000294816 Q8N8P6 123 aa7.99□□□□□ -1.13
LMX1A-201ENST00000294816 CACNA1HO95180 2353 aa7.99□□□□□ -1.13
LMX1A-201ENST00000294816 J3KRW8 73 aa7.99□□□□□ -1.13
LMX1A-201ENST00000294816 SRSF9Q13242 221 aaKnown RBP eCLIP7.99□□□□□ -1.13
LMX1A-201ENST00000294816 LAGE3Q14657 143 aa7.99□□□□□ -1.13
LMX1A-201ENST00000294816 RNF182Q8N6D2 247 aa7.99□□□□□ -1.13
LMX1A-201ENST00000294816 C8orf31Q8N9H6 132 aa7.99□□□□□ -1.13
LMX1A-201ENST00000294816 PIFOQ8TCI5 191 aa7.99□□□□□ -1.13
LMX1A-201ENST00000294816 PTH2Q96A98 100 aa7.99□□□□□ -1.13
LMX1A-201ENST00000294816 DMXL2Q8TDJ6 3036 aa7.98□□□□□ -1.13
LMX1A-201ENST00000294816 TACC2O95359 2948 aa7.98□□□□□ -1.13
LMX1A-201ENST00000294816 PRAC2D3DTV9 90 aa7.98□□□□□ -1.13
LMX1A-201ENST00000294816 H3BVH4 76 aa7.98□□□□□ -1.13
LMX1A-201ENST00000294816 CDX4O14627 284 aaPredicted RBP7.98□□□□□ -1.13
LMX1A-201ENST00000294816 IL17RELQ6ZVW7 336 aa7.98□□□□□ -1.13
LMX1A-201ENST00000294816 DYNAPQ8N1N2 210 aa7.98□□□□□ -1.13
LMX1A-201ENST00000294816 RAB1BQ9H0U4 201 aa7.98□□□□□ -1.13
LMX1A-201ENST00000294816 ZZEF1O43149 2961 aa7.98□□□□□ -1.13
LMX1A-201ENST00000294816 LINC01549A6NIU2 74 aa7.97□□□□□ -1.13
LMX1A-201ENST00000294816 MT-ATP8P03928 68 aa7.97□□□□□ -1.13
LMX1A-201ENST00000294816 SPANXN1Q5VSR9 72 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms