RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 ZFP2Q6ZN57 461 aa7.19□□□□□ -1.26
HMGCLL1-201ENST00000274901 FDCSPQ8NFU4 85 aa7.19□□□□□ -1.26
HMGCLL1-201ENST00000274901 TMEM158Q8WZ71 300 aa7.19□□□□□ -1.26
HMGCLL1-201ENST00000274901 SUB1P53999 127 aaKnown RBP eCLIP7.19□□□□□ -1.26
HMGCLL1-201ENST00000274901 DEFB109BQ30KR1 87 aa7.19□□□□□ -1.26
HMGCLL1-201ENST00000274901 PSMG3-AS1Q96PY0 264 aa7.19□□□□□ -1.26
HMGCLL1-201ENST00000274901 ANAPC13Q9BS18 74 aa7.19□□□□□ -1.26
HMGCLL1-201ENST00000274901 UFC1Q9Y3C8 167 aa7.19□□□□□ -1.26
HMGCLL1-201ENST00000274901 DMXL2Q8TDJ6 3036 aa7.18□□□□□ -1.26
HMGCLL1-201ENST00000274901 LINC01546A6NGU7 62 aa7.18□□□□□ -1.26
HMGCLL1-201ENST00000274901 TM4SF5O14894 197 aa7.18□□□□□ -1.26
HMGCLL1-201ENST00000274901 FCN3O75636 299 aa7.18□□□□□ -1.26
HMGCLL1-201ENST00000274901 EGR2P11161 476 aaPredicted RBP7.18□□□□□ -1.26
HMGCLL1-201ENST00000274901 CCL3L1P16619 93 aa7.18□□□□□ -1.26
HMGCLL1-201ENST00000274901 NBL1P41271 181 aa7.18□□□□□ -1.26
HMGCLL1-201ENST00000274901 LINC00574Q9H8X3 128 aa7.18□□□□□ -1.26
HMGCLL1-201ENST00000274901 TMEM14CQ9P0S9 112 aa7.18□□□□□ -1.26
HMGCLL1-201ENST00000274901 ZNF80P51504 273 aaPredicted RBP7.18□□□□□ -1.26
HMGCLL1-201ENST00000274901 PVRIGQ6DKI7 326 aa7.18□□□□□ -1.26
HMGCLL1-201ENST00000274901 Q6ZT83 130 aa7.18□□□□□ -1.26
HMGCLL1-201ENST00000274901 ASCL5Q7RTU5 278 aa7.18□□□□□ -1.26
HMGCLL1-201ENST00000274901 CNEP1R1Q8N9A8 125 aa7.18□□□□□ -1.26
HMGCLL1-201ENST00000274901 OR10X1Q8NGY0 326 aa7.18□□□□□ -1.26
HMGCLL1-201ENST00000274901 ATP6V0E2Q8NHE4 81 aa7.18□□□□□ -1.26
HMGCLL1-201ENST00000274901 CEP295Q9C0D2 2601 aa7.17□□□□□ -1.26
HMGCLL1-201ENST00000274901 IGHV3-72A0A0B4J1Y9 119 aa7.17□□□□□ -1.26
HMGCLL1-201ENST00000274901 BRI3O95415 125 aa7.17□□□□□ -1.26
HMGCLL1-201ENST00000274901 HLA-DRB4P13762 266 aa7.17□□□□□ -1.26
HMGCLL1-201ENST00000274901 CNTFRP26992 372 aa7.17□□□□□ -1.26
HMGCLL1-201ENST00000274901 HERV-K104P63124 156 aa7.17□□□□□ -1.26
HMGCLL1-201ENST00000274901 TAL2Q16559 108 aa7.17□□□□□ -1.26
HMGCLL1-201ENST00000274901 NGBQ9NPG2 151 aa7.17□□□□□ -1.26
HMGCLL1-201ENST00000274901 HLA-DRB4X5D2U9 266 aa7.17□□□□□ -1.26
HMGCLL1-201ENST00000274901 NDUFA3O95167 84 aa7.17□□□□□ -1.26
HMGCLL1-201ENST00000274901 TNFRSF6BO95407 300 aa7.17□□□□□ -1.26
HMGCLL1-201ENST00000274901 PSMB2P49721 201 aa7.17□□□□□ -1.26
HMGCLL1-201ENST00000274901 GAGE5Q13069 117 aa7.17□□□□□ -1.26
HMGCLL1-201ENST00000274901 GAGE6Q13070 117 aa7.17□□□□□ -1.26
HMGCLL1-201ENST00000274901 OR4C13Q8NGP0 309 aa7.17□□□□□ -1.26
HMGCLL1-201ENST00000274901 AJUBAQ96IF1 538 aa7.17□□□□□ -1.26
HMGCLL1-201ENST00000274901 MAP1LC3AQ9H492 121 aa7.17□□□□□ -1.26
HMGCLL1-201ENST00000274901 ROS1P08922 2347 aa7.16□□□□□ -1.26
HMGCLL1-201ENST00000274901 IGLV2-18A0A075B6J9 118 aa7.16□□□□□ -1.26
HMGCLL1-201ENST00000274901 IGKV2-40A0A087WW87 121 aaPredicted RBP7.16□□□□□ -1.26
HMGCLL1-201ENST00000274901 TRGV5A0A0B4J1U4 118 aa7.16□□□□□ -1.26
HMGCLL1-201ENST00000274901 TRBV7-9A0A0J9YWB2 115 aa7.16□□□□□ -1.26
HMGCLL1-201ENST00000274901 MRPS12O15235 138 aaKnown RBP7.16□□□□□ -1.26
HMGCLL1-201ENST00000274901 IGKV2D-40P01614 121 aaPredicted RBP7.16□□□□□ -1.26
HMGCLL1-201ENST00000274901 IGLV1-44P01699 117 aa7.16□□□□□ -1.26
HMGCLL1-201ENST00000274901 Q8TAT8 98 aa7.16□□□□□ -1.26
HMGCLL1-201ENST00000274901 APC2O95996 2303 aa7.16□□□□□ -1.26
HMGCLL1-201ENST00000274901 LINC01549A6NIU2 74 aa7.16□□□□□ -1.26
HMGCLL1-201ENST00000274901 IGKV1-17P01599 117 aa7.16□□□□□ -1.26
HMGCLL1-201ENST00000274901 EFNA4P52798 201 aa7.16□□□□□ -1.26
HMGCLL1-201ENST00000274901 DLX4Q92988 240 aaPredicted RBP7.16□□□□□ -1.26
HMGCLL1-201ENST00000274901 CITED1Q99966 193 aa7.16□□□□□ -1.26
HMGCLL1-201ENST00000274901 RP1L1Q8IWN7 2480 aaPredicted RBP7.15□□□□□ -1.26
HMGCLL1-201ENST00000274901 CCDC179H3BU77 68 aa7.15□□□□□ -1.26
HMGCLL1-201ENST00000274901 HOXA3O43365 443 aaPredicted RBP7.15□□□□□ -1.26
HMGCLL1-201ENST00000274901 TGFAP01135 160 aa7.15□□□□□ -1.26
HMGCLL1-201ENST00000274901 THBDP07204 575 aa7.15□□□□□ -1.26
HMGCLL1-201ENST00000274901 IGLC6P0CF74 106 aa7.15□□□□□ -1.26
HMGCLL1-201ENST00000274901 ANKRD11Q6UB99 2663 aaPredicted RBP7.15□□□□□ -1.27
HMGCLL1-201ENST00000274901 LGALS1P09382 135 aaKnown RBP7.15□□□□□ -1.27
HMGCLL1-201ENST00000274901 PRB3Q04118 309 aaPredicted RBP7.15□□□□□ -1.27
HMGCLL1-201ENST00000274901 Q6ZS92 163 aa7.15□□□□□ -1.27
HMGCLL1-201ENST00000274901 SHANK2-AS3Q9BTD1 123 aa7.15□□□□□ -1.27
HMGCLL1-201ENST00000274901 RALYQ9UKM9 306 aaKnown RBP7.15□□□□□ -1.27
HMGCLL1-201ENST00000274901 PIEZO2Q9H5I5 2752 aa7.14□□□□□ -1.27
HMGCLL1-201ENST00000274901 MALRD1Q5VYJ5 2156 aa7.14□□□□□ -1.27
HMGCLL1-201ENST00000274901 ACACAQ13085 2346 aa7.14□□□□□ -1.27
HMGCLL1-201ENST00000274901 TACC2O95359 2948 aa7.14□□□□□ -1.27
HMGCLL1-201ENST00000274901 LOC107984156A0A0G2JMH3 177 aa7.14□□□□□ -1.27
HMGCLL1-201ENST00000274901 H3BRN7 92 aa7.14□□□□□ -1.27
HMGCLL1-201ENST00000274901 DLX1P56177 255 aa7.14□□□□□ -1.27
HMGCLL1-201ENST00000274901 ARL17AQ8IVW1 177 aa7.14□□□□□ -1.27
HMGCLL1-201ENST00000274901 PPDPFLQ8WWR9 84 aa7.14□□□□□ -1.27
HMGCLL1-201ENST00000274901 PLEKHB2Q96CS7 222 aa7.14□□□□□ -1.27
HMGCLL1-201ENST00000274901 RAB9BQ9NP90 201 aa7.14□□□□□ -1.27
HMGCLL1-201ENST00000274901 ATMQ13315 3056 aa7.14□□□□□ -1.27
HMGCLL1-201ENST00000274901 TRBV20-1A0A075B6N2 111 aa7.13□□□□□ -1.27
HMGCLL1-201ENST00000274901 TRAV26-2A0A0B4J265 109 aa7.13□□□□□ -1.27
HMGCLL1-201ENST00000274901 ATP5LO75964 103 aa7.13□□□□□ -1.27
HMGCLL1-201ENST00000274901 PSMG4Q5JS54 123 aa7.13□□□□□ -1.27
HMGCLL1-201ENST00000274901 IGFL4Q6B9Z1 124 aa7.13□□□□□ -1.27
HMGCLL1-201ENST00000274901 TEN1Q86WV5 123 aa7.13□□□□□ -1.27
HMGCLL1-201ENST00000274901 SMIM20Q8N5G0 67 aa7.13□□□□□ -1.27
HMGCLL1-201ENST00000274901 C9orf106Q8NAJ2 232 aa7.13□□□□□ -1.27
HMGCLL1-201ENST00000274901 RPEQ96AT9 228 aa7.13□□□□□ -1.27
HMGCLL1-201ENST00000274901 ZGRF1Q86YA3 2104 aa7.13□□□□□ -1.27
HMGCLL1-201ENST00000274901 A0A087WX48 190 aa7.13□□□□□ -1.27
HMGCLL1-201ENST00000274901 MYMXA0A1B0GTQ4 84 aa7.13□□□□□ -1.27
HMGCLL1-201ENST00000274901 TEX22C9J3V5 150 aa7.13□□□□□ -1.27
HMGCLL1-201ENST00000274901 ENSAO43768 121 aaKnown RBP7.13□□□□□ -1.27
HMGCLL1-201ENST00000274901 CRLF1O75462 422 aa7.13□□□□□ -1.27
HMGCLL1-201ENST00000274901 TCL1BO95988 128 aa7.13□□□□□ -1.27
HMGCLL1-201ENST00000274901 IL4P05112 153 aa7.13□□□□□ -1.27
HMGCLL1-201ENST00000274901 UBE2D3P61077 147 aa7.13□□□□□ -1.27
HMGCLL1-201ENST00000274901 UBE2D2P62837 147 aa7.13□□□□□ -1.27
HMGCLL1-201ENST00000274901 MZT1Q08AG7 82 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms