RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 DAD1P61803 113 aa14.38□□□□□ -0.11
COL5A3-201ENST00000264828 INAFM2P0DMQ5 153 aa14.38□□□□□ -0.11
COL5A3-201ENST00000264828 PRR30Q53SZ7 412 aaPredicted RBP14.38□□□□□ -0.11
COL5A3-201ENST00000264828 THAP8Q8NA92 274 aa14.38□□□□□ -0.11
COL5A3-201ENST00000264828 SCRT2Q9NQ03 307 aa14.38□□□□□ -0.11
COL5A3-201ENST00000264828 TRBV20-1A0A075B6N2 111 aa14.38□□□□□ -0.11
COL5A3-201ENST00000264828 HLA-DRB4P13762 266 aa14.38□□□□□ -0.11
COL5A3-201ENST00000264828 MRPL35Q9NZE8 188 aaKnown RBP14.38□□□□□ -0.11
COL5A3-201ENST00000264828 HLA-DRB4X5D2U9 266 aa14.38□□□□□ -0.11
COL5A3-201ENST00000264828 CRLF1O75462 422 aa14.38□□□□□ -0.11
COL5A3-201ENST00000264828 COX8AP10176 69 aa14.38□□□□□ -0.11
COL5A3-201ENST00000264828 CACNA1DQ01668 2161 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 IGHV1OR15-1A0A075B7D0 117 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 BVES-AS1Q5T3Y7 98 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 ZNF833PQ6ZTB9 187 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 NPYP01303 97 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 HOXD3P31249 432 aaPredicted RBP14.37□□□□□ -0.11
COL5A3-201ENST00000264828 YPEL3P61236 119 aaPredicted RBP14.37□□□□□ -0.11
COL5A3-201ENST00000264828 VWC2Q2TAL6 325 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 CT83Q5H943 113 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 CLPSL2Q6UWE3 100 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 RTTNQ86VV8 2226 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 K7EP13 123 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 IFITM1P13164 125 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 ZC2HC1AQ96GY0 325 aa14.37□□□□□ -0.11
COL5A3-201ENST00000264828 RS1O15537 224 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 NDUFA12Q9UI09 145 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 TINCRA0A1B0GVN0 87 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 SDK2Q58EX2 2172 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 IGKV1-39P01597 117 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 IGHG3P01860 377 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 IGKV1D-39P04432 117 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 C17orf58Q2M2W7 97 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 F8W1H4 67 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 UBL5Q9BZL1 73 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 A0A1W2PPM0 123 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 CARD19Q96LW7 228 aa14.36□□□□□ -0.11
COL5A3-201ENST00000264828 H3BRN7 92 aa14.35□□□□□ -0.11
COL5A3-201ENST00000264828 CEACAM8P31997 349 aaPredicted RBP14.35□□□□□ -0.11
COL5A3-201ENST00000264828 PRR25Q96S07 402 aa14.35□□□□□ -0.11
COL5A3-201ENST00000264828 H3BMG7 143 aa14.35□□□□□ -0.11
COL5A3-201ENST00000264828 RHODO00212 210 aa14.35□□□□□ -0.11
COL5A3-201ENST00000264828 IGHV2-70P01814 119 aa14.35□□□□□ -0.11
COL5A3-201ENST00000264828 UBE2E1P51965 193 aa14.35□□□□□ -0.11
COL5A3-201ENST00000264828 TMEM243Q9BU79 118 aa14.35□□□□□ -0.11
COL5A3-201ENST00000264828 MMP23AO75900 390 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 WISP1O95388 367 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 RNF114Q9Y508 228 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 AHCTF1Q8WYP5 2266 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 Q6ZS92 163 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 WDR86Q86TI4 376 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 ATP6V0BQ99437 205 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 MSMBP08118 114 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 OR11H6Q8NGC7 330 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 LGALS9BQ3B8N2 356 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 LGALS9CQ6DKI2 356 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 PRB1P04280 392 aa14.34□□□□□ -0.11
COL5A3-201ENST00000264828 DKK2Q9UBU2 259 aa14.33□□□□□ -0.11
COL5A3-201ENST00000264828 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.33□□□□□ -0.12
COL5A3-201ENST00000264828 Q6ZR03 302 aa14.33□□□□□ -0.12
COL5A3-201ENST00000264828 TRACP01848 142 aa14.33□□□□□ -0.12
COL5A3-201ENST00000264828 PRO1854Q9UHT4 67 aa14.33□□□□□ -0.12
COL5A3-201ENST00000264828 DIAPH2-AS1Q14236 149 aa14.33□□□□□ -0.12
COL5A3-201ENST00000264828 FER1L5A0AVI2 2057 aa14.32□□□□□ -0.12
COL5A3-201ENST00000264828 IGHV1-69DA0A0B4J2H0 117 aa14.32□□□□□ -0.12
COL5A3-201ENST00000264828 IGHV1-69P01742 117 aa14.32□□□□□ -0.12
COL5A3-201ENST00000264828 AMTNQ6UX39 209 aa14.32□□□□□ -0.12
COL5A3-201ENST00000264828 DSCR8Q96T75 97 aa14.32□□□□□ -0.12
COL5A3-201ENST00000264828 GATA4P43694 442 aa14.32□□□□□ -0.12
COL5A3-201ENST00000264828 LY6G6EA0A0G2JKS1 128 aa14.32□□□□□ -0.12
COL5A3-201ENST00000264828 UTF1Q5T230 341 aa14.32□□□□□ -0.12
COL5A3-201ENST00000264828 U3KQA8 63 aa14.32□□□□□ -0.12
COL5A3-201ENST00000264828 PRSS29PA6NIE9 313 aa14.31□□□□□ -0.12
COL5A3-201ENST00000264828 CDKN1BP46527 198 aa14.31□□□□□ -0.12
COL5A3-201ENST00000264828 KLF5Q13887 457 aaPredicted RBP14.31□□□□□ -0.12
COL5A3-201ENST00000264828 PTPRDP23468 1912 aa14.31□□□□□ -0.12
COL5A3-201ENST00000264828 TCTEX1D4Q5JR98 221 aa14.31□□□□□ -0.12
COL5A3-201ENST00000264828 ZNF503-AS2A6NEH8 195 aa14.31□□□□□ -0.12
COL5A3-201ENST00000264828 WT1-ASQ06250 92 aa14.31□□□□□ -0.12
COL5A3-201ENST00000264828 C3orf56Q8N813 242 aa14.3□□□□□ -0.12
COL5A3-201ENST00000264828 FAM120AOSQ5T036 256 aa14.3□□□□□ -0.12
COL5A3-201ENST00000264828 GAGE12HA6NDE8 117 aa14.3□□□□□ -0.12
COL5A3-201ENST00000264828 LMO1P25800 156 aa14.3□□□□□ -0.12
COL5A3-201ENST00000264828 YLPM1P49750 1951 aaKnown RBP14.3□□□□□ -0.12
COL5A3-201ENST00000264828 IGHG4P01861 327 aa14.3□□□□□ -0.12
COL5A3-201ENST00000264828 CEP290O15078 2479 aa14.3□□□□□ -0.12
COL5A3-201ENST00000264828 FXYD5Q96DB9 178 aa14.29□□□□□ -0.12
COL5A3-201ENST00000264828 NLRC5Q86WI3 1866 aa14.29□□□□□ -0.12
COL5A3-201ENST00000264828 K7ENP7 123 aa14.29□□□□□ -0.12
COL5A3-201ENST00000264828 NDUFS7O75251 213 aa14.29□□□□□ -0.12
COL5A3-201ENST00000264828 CFPP27918 469 aa14.29□□□□□ -0.12
COL5A3-201ENST00000264828 FAM231DQ6ZW35 169 aa14.29□□□□□ -0.12
COL5A3-201ENST00000264828 SMIM2Q9BVW6 85 aa14.29□□□□□ -0.12
COL5A3-201ENST00000264828 K7EN84 100 aa14.29□□□□□ -0.12
COL5A3-201ENST00000264828 MYLKQ15746 1914 aa14.29□□□□□ -0.12
COL5A3-201ENST00000264828 C17orf77Q96MU5 243 aa14.29□□□□□ -0.12
COL5A3-201ENST00000264828 IGHV2-70DA0A0C4DH43 119 aa14.28□□□□□ -0.12
COL5A3-201ENST00000264828 J3QQQ9 107 aa14.28□□□□□ -0.12
COL5A3-201ENST00000264828 IGHV2-5P01817 119 aa14.28□□□□□ -0.12
COL5A3-201ENST00000264828 hADV29S1A0JD25 119 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms