RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 MYO18BQ8IUG5 2567 aa9.94□□□□□ -0.82
LIG1-201ENST00000263274 EVI2AP22794 236 aa9.94□□□□□ -0.82
LIG1-201ENST00000263274 FOXE3Q13461 319 aa9.94□□□□□ -0.82
LIG1-201ENST00000263274 PVRIGQ6DKI7 326 aa9.94□□□□□ -0.82
LIG1-201ENST00000263274 ZNF747Q9BV97 191 aa9.94□□□□□ -0.82
LIG1-201ENST00000263274 CD5LO43866 347 aa9.94□□□□□ -0.82
LIG1-201ENST00000263274 CLEC3BP05452 202 aa9.94□□□□□ -0.82
LIG1-201ENST00000263274 ORMDL3Q8N138 153 aa9.94□□□□□ -0.82
LIG1-201ENST00000263274 SIGLEC8Q9NYZ4 499 aa9.94□□□□□ -0.82
LIG1-201ENST00000263274 TMEM14CQ9P0S9 112 aa9.94□□□□□ -0.82
LIG1-201ENST00000263274 CRYBA4P53673 196 aa9.93□□□□□ -0.82
LIG1-201ENST00000263274 RPS20P60866 119 aaKnown RBP9.93□□□□□ -0.82
LIG1-201ENST00000263274 ARPC1AQ92747 370 aa9.93□□□□□ -0.82
LIG1-201ENST00000263274 TRAV26-1A0A087WT03 109 aa9.93□□□□□ -0.82
LIG1-201ENST00000263274 PRSS1P07477 247 aa9.93□□□□□ -0.82
LIG1-201ENST00000263274 ERCC8Q13216 396 aa9.93□□□□□ -0.82
LIG1-201ENST00000263274 ZNF479Q96JC4 524 aa9.93□□□□□ -0.82
LIG1-201ENST00000263274 VGLL1Q99990 258 aa9.93□□□□□ -0.82
LIG1-201ENST00000263274 MSRB1Q9NZV6 116 aa9.93□□□□□ -0.82
LIG1-201ENST00000263274 DCHS2Q6V1P9 2916 aa9.93□□□□□ -0.82
LIG1-201ENST00000263274 C5orf64Q2M2E5 130 aa9.92□□□□□ -0.82
LIG1-201ENST00000263274 RAB1BQ9H0U4 201 aa9.92□□□□□ -0.82
LIG1-201ENST00000263274 C1RLQ9NZP8 487 aa9.92□□□□□ -0.82
LIG1-201ENST00000263274 FAM208BQ5VWN6 2430 aa9.92□□□□□ -0.82
LIG1-201ENST00000263274 CREBBPQ92793 2442 aa9.92□□□□□ -0.82
LIG1-201ENST00000263274 NPIPB6E9PJ23 425 aa9.92□□□□□ -0.82
LIG1-201ENST00000263274 G3V4G9 280 aa9.92□□□□□ -0.82
LIG1-201ENST00000263274 SCRT2Q9NQ03 307 aa9.92□□□□□ -0.82
LIG1-201ENST00000263274 FASNP49327 2511 aaKnown RBP9.92□□□□□ -0.82
LIG1-201ENST00000263274 RPL7P18124 248 aaKnown RBP9.91□□□□□ -0.82
LIG1-201ENST00000263274 HIST1H1AQ02539 215 aaPredicted RBP9.91□□□□□ -0.82
LIG1-201ENST00000263274 MRPL51Q4U2R6 128 aaKnown RBP9.91□□□□□ -0.82
LIG1-201ENST00000263274 NPYP01303 97 aa9.91□□□□□ -0.82
LIG1-201ENST00000263274 EGR2P11161 476 aaPredicted RBP9.91□□□□□ -0.82
LIG1-201ENST00000263274 AZU1P20160 251 aa9.91□□□□□ -0.82
LIG1-201ENST00000263274 NDPQ00604 133 aa9.91□□□□□ -0.82
LIG1-201ENST00000263274 RNF182Q8N6D2 247 aa9.91□□□□□ -0.82
LIG1-201ENST00000263274 RABAC1Q9UI14 185 aa9.91□□□□□ -0.82
LIG1-201ENST00000263274 USP24Q9UPU5 2620 aa9.91□□□□□ -0.82
LIG1-201ENST00000263274 A0A1B0GV72 72 aa9.91□□□□□ -0.82
LIG1-201ENST00000263274 FAM104BQ5XKR9 115 aa9.91□□□□□ -0.82
LIG1-201ENST00000263274 UFC1Q9Y3C8 167 aa9.91□□□□□ -0.82
LIG1-201ENST00000263274 CRXO43186 299 aaPredicted RBP9.9□□□□□ -0.82
LIG1-201ENST00000263274 TMEM97Q5BJF2 176 aa9.9□□□□□ -0.82
LIG1-201ENST00000263274 HIF1ANQ9NWT6 349 aa9.9□□□□□ -0.82
LIG1-201ENST00000263274 OR2K2Q8NGT1 345 aa9.9□□□□□ -0.82
LIG1-201ENST00000263274 MS4A6AQ9H2W1 248 aa9.9□□□□□ -0.82
LIG1-201ENST00000263274 IGKV3-7A0A075B6H7 116 aa9.89□□□□□ -0.83
LIG1-201ENST00000263274 NDUFS7O75251 213 aa9.89□□□□□ -0.83
LIG1-201ENST00000263274 LINC01545Q5VT33 79 aa9.89□□□□□ -0.83
LIG1-201ENST00000263274 IFI27L1Q96BM0 104 aa9.89□□□□□ -0.83
LIG1-201ENST00000263274 FANCD2OSQ96PS1 177 aa9.89□□□□□ -0.83
LIG1-201ENST00000263274 PRR25Q96S07 402 aa9.89□□□□□ -0.83
LIG1-201ENST00000263274 LINC00527Q9UJ94 153 aa9.89□□□□□ -0.83
LIG1-201ENST00000263274 GATA1P15976 413 aaPredicted RBP9.89□□□□□ -0.83
LIG1-201ENST00000263274 ZNF80P51504 273 aaPredicted RBP9.89□□□□□ -0.83
LIG1-201ENST00000263274 CHD6Q8TD26 2715 aa9.89□□□□□ -0.83
LIG1-201ENST00000263274 IGHV3OR16-10A0A075B7F0 116 aa9.89□□□□□ -0.83
LIG1-201ENST00000263274 HBDP02042 147 aa9.89□□□□□ -0.83
LIG1-201ENST00000263274 COX8AP10176 69 aa9.89□□□□□ -0.83
LIG1-201ENST00000263274 TTTY13Q9BZ97 58 aa9.89□□□□□ -0.83
LIG1-201ENST00000263274 SPCS1Q9Y6A9 102 aa9.89□□□□□ -0.83
LIG1-201ENST00000263274 SCGB2A1O75556 95 aa9.88□□□□□ -0.83
LIG1-201ENST00000263274 DYNAPQ8N1N2 210 aa9.88□□□□□ -0.83
LIG1-201ENST00000263274 LYPD1Q8N2G4 141 aa9.88□□□□□ -0.83
LIG1-201ENST00000263274 JKAMPQ9P055 326 aa9.88□□□□□ -0.83
LIG1-201ENST00000263274 DKK2Q9UBU2 259 aa9.88□□□□□ -0.83
LIG1-201ENST00000263274 Q6AWC8 147 aa9.88□□□□□ -0.83
LIG1-201ENST00000263274 CLEC19AQ6UXS0 136 aa9.88□□□□□ -0.83
LIG1-201ENST00000263274 PCP2Q8IVA1 136 aa9.88□□□□□ -0.83
LIG1-201ENST00000263274 VKORC1Q9BQB6 163 aa9.88□□□□□ -0.83
LIG1-201ENST00000263274 A1L4Q6 167 aa9.88□□□□□ -0.83
LIG1-201ENST00000263274 GAS8-AS1O95177 125 aa9.88□□□□□ -0.83
LIG1-201ENST00000263274 GCSHP23434 173 aa9.88□□□□□ -0.83
LIG1-201ENST00000263274 LEPP41159 167 aa9.88□□□□□ -0.83
LIG1-201ENST00000263274 HERV-K104P63124 156 aa9.88□□□□□ -0.83
LIG1-201ENST00000263274 VMO1Q7Z5L0 202 aa9.88□□□□□ -0.83
LIG1-201ENST00000263274 FCER1GP30273 86 aa9.87□□□□□ -0.83
LIG1-201ENST00000263274 A0A0G2JLM5 398 aa9.87□□□□□ -0.83
LIG1-201ENST00000263274 A6NDN8 102 aa9.87□□□□□ -0.83
LIG1-201ENST00000263274 SPRY2O43597 315 aa9.87□□□□□ -0.83
LIG1-201ENST00000263274 C15orf32Q32M92 178 aa9.87□□□□□ -0.83
LIG1-201ENST00000263274 ZNF562Q6V9R5 426 aa9.87□□□□□ -0.83
LIG1-201ENST00000263274 SIGMAR1Q99720 223 aa9.87□□□□□ -0.83
LIG1-201ENST00000263274 RNF5Q99942 180 aa9.87□□□□□ -0.83
LIG1-201ENST00000263274 A0A1B0GW15 77 aa9.86□□□□□ -0.83
LIG1-201ENST00000263274 PRAC2D3DTV9 90 aa9.86□□□□□ -0.83
LIG1-201ENST00000263274 RPL11P62913 178 aaKnown RBP9.86□□□□□ -0.83
LIG1-201ENST00000263274 CDSNQ15517 529 aa9.86□□□□□ -0.83
LIG1-201ENST00000263274 MAP1LC3AQ9H492 121 aa9.86□□□□□ -0.83
LIG1-201ENST00000263274 MSRB2Q9Y3D2 182 aa9.86□□□□□ -0.83
LIG1-201ENST00000263274 ITPR1Q14643 2758 aa9.86□□□□□ -0.83
LIG1-201ENST00000263274 CSPG4Q6UVK1 2322 aa9.86□□□□□ -0.83
LIG1-201ENST00000263274 JMJD8Q96S16 334 aa9.86□□□□□ -0.83
LIG1-201ENST00000263274 KLK15Q9H2R5 256 aa9.86□□□□□ -0.83
LIG1-201ENST00000263274 IGLV11-55A0A075B6I3 123 aa9.86□□□□□ -0.83
LIG1-201ENST00000263274 WI2-2373I1.2A0A1W2PRP0 233 aa9.86□□□□□ -0.83
LIG1-201ENST00000263274 LY6LH3BQJ8 138 aa9.86□□□□□ -0.83
LIG1-201ENST00000263274 BOD1L2Q8IYS8 172 aa9.86□□□□□ -0.83
LIG1-201ENST00000263274 ZNF462Q96JM2 2506 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms