RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 RABAC1Q9UI14 185 aa7.11□□□□□ -1.27
MSH4-201ENST00000263187 SMAD5-AS1Q9Y6J3 95 aa7.11□□□□□ -1.27
MSH4-201ENST00000263187 IGKV3-7A0A075B6H7 116 aa7.11□□□□□ -1.27
MSH4-201ENST00000263187 TRAV26-2A0A0B4J265 109 aa7.11□□□□□ -1.27
MSH4-201ENST00000263187 C7orf71A4D174 169 aa7.11□□□□□ -1.27
MSH4-201ENST00000263187 CLEC3BP05452 202 aa7.11□□□□□ -1.27
MSH4-201ENST00000263187 FAM104BQ5XKR9 115 aa7.11□□□□□ -1.27
MSH4-201ENST00000263187 C2orf91Q6ZV80 131 aa7.11□□□□□ -1.27
MSH4-201ENST00000263187 ORMDL3Q8N138 153 aa7.11□□□□□ -1.27
MSH4-201ENST00000263187 PRR25Q96S07 402 aa7.11□□□□□ -1.27
MSH4-201ENST00000263187 DOPEY2Q9Y3R5 2298 aa7.11□□□□□ -1.27
MSH4-201ENST00000263187 FAM231BA6NCW3 169 aa7.1□□□□□ -1.27
MSH4-201ENST00000263187 CTSGP08311 255 aa7.1□□□□□ -1.27
MSH4-201ENST00000263187 HOXB4P17483 251 aaPredicted RBP7.1□□□□□ -1.27
MSH4-201ENST00000263187 DEFB1P60022 68 aa7.1□□□□□ -1.27
MSH4-201ENST00000263187 FER1L6-AS1Q8NA97 138 aa7.1□□□□□ -1.27
MSH4-201ENST00000263187 VPS25Q9BRG1 176 aa7.1□□□□□ -1.27
MSH4-201ENST00000263187 IGLV11-55A0A075B6I3 123 aa7.1□□□□□ -1.27
MSH4-201ENST00000263187 WI2-2373I1.2A0A1W2PRP0 233 aa7.1□□□□□ -1.27
MSH4-201ENST00000263187 C15orf32Q32M92 178 aa7.1□□□□□ -1.27
MSH4-201ENST00000263187 C12orf54Q6X4T0 127 aa7.1□□□□□ -1.27
MSH4-201ENST00000263187 IL17RELQ6ZVW7 336 aa7.1□□□□□ -1.27
MSH4-201ENST00000263187 CLEC19AQ6UXS0 136 aa7.1□□□□□ -1.27
MSH4-201ENST00000263187 DEFB125Q8N687 156 aa7.1□□□□□ -1.27
MSH4-201ENST00000263187 TIMD4Q96H15 378 aa7.1□□□□□ -1.27
MSH4-201ENST00000263187 ITPR1Q14643 2758 aa7.1□□□□□ -1.27
MSH4-201ENST00000263187 POLQO75417 2590 aa7.1□□□□□ -1.27
MSH4-201ENST00000263187 TMEM8BA6NDV4 472 aa7.09□□□□□ -1.27
MSH4-201ENST00000263187 H3BUT2 72 aa7.09□□□□□ -1.27
MSH4-201ENST00000263187 COX8AP10176 69 aa7.09□□□□□ -1.27
MSH4-201ENST00000263187 C16orf54Q6UWD8 224 aa7.09□□□□□ -1.27
MSH4-201ENST00000263187 TMEM219Q86XT9 240 aa7.09□□□□□ -1.27
MSH4-201ENST00000263187 VKORC1Q9BQB6 163 aa7.09□□□□□ -1.27
MSH4-201ENST00000263187 RAB1BQ9H0U4 201 aa7.09□□□□□ -1.27
MSH4-201ENST00000263187 SORL1Q92673 2214 aa7.09□□□□□ -1.27
MSH4-201ENST00000263187 CEACAM3P40198 252 aa7.09□□□□□ -1.27
MSH4-201ENST00000263187 HIST1H1AQ02539 215 aaPredicted RBP7.09□□□□□ -1.27
MSH4-201ENST00000263187 TMEM97Q5BJF2 176 aa7.09□□□□□ -1.27
MSH4-201ENST00000263187 UFC1Q9Y3C8 167 aa7.09□□□□□ -1.27
MSH4-201ENST00000263187 FLNCQ14315 2725 aa7.09□□□□□ -1.27
MSH4-201ENST00000263187 USP9YO00507 2555 aaPredicted RBP7.09□□□□□ -1.28
MSH4-201ENST00000263187 IGHG4P01861 327 aa7.09□□□□□ -1.28
MSH4-201ENST00000263187 PRSS1P07477 247 aa7.09□□□□□ -1.28
MSH4-201ENST00000263187 LEPP41159 167 aa7.09□□□□□ -1.28
MSH4-201ENST00000263187 ZNF562Q6V9R5 426 aa7.09□□□□□ -1.28
MSH4-201ENST00000263187 IFI27L1Q96BM0 104 aa7.09□□□□□ -1.28
MSH4-201ENST00000263187 RPL7P18124 248 aaKnown RBP7.08□□□□□ -1.28
MSH4-201ENST00000263187 IGHV7-81A0A0B4J1V7 117 aa7.08□□□□□ -1.28
MSH4-201ENST00000263187 SAP30O75446 220 aa7.08□□□□□ -1.28
MSH4-201ENST00000263187 TRGV3P03979 118 aa7.08□□□□□ -1.28
MSH4-201ENST00000263187 KLK15Q9H2R5 256 aa7.08□□□□□ -1.28
MSH4-201ENST00000263187 CST9LQ9H4G1 147 aa7.08□□□□□ -1.28
MSH4-201ENST00000263187 A0A1W2PPR1 153 aa7.07□□□□□ -1.28
MSH4-201ENST00000263187 GAGE12BA1L429 117 aa7.07□□□□□ -1.28
MSH4-201ENST00000263187 HBDP02042 147 aa7.07□□□□□ -1.28
MSH4-201ENST00000263187 AP1S3Q96PC3 154 aa7.07□□□□□ -1.28
MSH4-201ENST00000263187 ZANQ9Y493 2812 aa7.07□□□□□ -1.28
MSH4-201ENST00000263187 TRAV30A0A087WSZ9 112 aa7.07□□□□□ -1.28
MSH4-201ENST00000263187 ATP6V0E1O15342 81 aa7.07□□□□□ -1.28
MSH4-201ENST00000263187 PRTN3P24158 256 aa7.07□□□□□ -1.28
MSH4-201ENST00000263187 GTSCR1Q86UQ5 136 aa7.07□□□□□ -1.28
MSH4-201ENST00000263187 LY6G5BQ8NDX9 201 aa7.07□□□□□ -1.28
MSH4-201ENST00000263187 OR11H6Q8NGC7 330 aa7.07□□□□□ -1.28
MSH4-201ENST00000263187 IGKV2D-26A0A0A0MRZ7 120 aa7.07□□□□□ -1.28
MSH4-201ENST00000263187 GAGE10A6NGK3 116 aa7.07□□□□□ -1.28
MSH4-201ENST00000263187 FBLL1A6NHQ2 334 aaKnown RBP7.07□□□□□ -1.28
MSH4-201ENST00000263187 NDUFA3O95167 84 aa7.07□□□□□ -1.28
MSH4-201ENST00000263187 IGF1P05019 195 aa7.07□□□□□ -1.28
MSH4-201ENST00000263187 ZNF575Q86XF7 245 aa7.07□□□□□ -1.28
MSH4-201ENST00000263187 LYPD1Q8N2G4 141 aa7.07□□□□□ -1.28
MSH4-201ENST00000263187 JMJD8Q96S16 334 aa7.07□□□□□ -1.28
MSH4-201ENST00000263187 MS4A6AQ9H2W1 248 aa7.07□□□□□ -1.28
MSH4-201ENST00000263187 C11orf21Q9P2W6 132 aa7.07□□□□□ -1.28
MSH4-201ENST00000263187 RAXQ9Y2V3 346 aa7.07□□□□□ -1.28
MSH4-201ENST00000263187 K7ERJ3 54 aa7.06□□□□□ -1.28
MSH4-201ENST00000263187 GCSHP23434 173 aa7.06□□□□□ -1.28
MSH4-201ENST00000263187 NPBQ8NG41 125 aa7.06□□□□□ -1.28
MSH4-201ENST00000263187 UBTD1Q9HAC8 227 aa7.06□□□□□ -1.28
MSH4-201ENST00000263187 PPP1R14DQ9NXH3 145 aa7.06□□□□□ -1.28
MSH4-201ENST00000263187 FGF6P10767 208 aa7.06□□□□□ -1.28
MSH4-201ENST00000263187 RIPPLY3P57055 190 aa7.06□□□□□ -1.28
MSH4-201ENST00000263187 ADORA2A-AS1P86434 159 aa7.06□□□□□ -1.28
MSH4-201ENST00000263187 SAPCD1Q5SSQ6 148 aa7.06□□□□□ -1.28
MSH4-201ENST00000263187 WFDC12Q8WWY7 111 aa7.06□□□□□ -1.28
MSH4-201ENST00000263187 RNF5Q99942 180 aa7.06□□□□□ -1.28
MSH4-201ENST00000263187 FOXC2Q99958 501 aa7.06□□□□□ -1.28
MSH4-201ENST00000263187 TMEM160Q9NX00 188 aa7.06□□□□□ -1.28
MSH4-201ENST00000263187 A1L4Q6 167 aa7.05□□□□□ -1.28
MSH4-201ENST00000263187 K7ENP7 123 aa7.05□□□□□ -1.28
MSH4-201ENST00000263187 CD5LO43866 347 aa7.05□□□□□ -1.28
MSH4-201ENST00000263187 KIR3DS1Q14943 382 aa7.05□□□□□ -1.28
MSH4-201ENST00000263187 OCIAD2Q56VL3 154 aa7.05□□□□□ -1.28
MSH4-201ENST00000263187 ARL6IP6Q8N6S5 226 aa7.05□□□□□ -1.28
MSH4-201ENST00000263187 GLMPQ8WWB7 406 aa7.05□□□□□ -1.28
MSH4-201ENST00000263187 TNFRSF6BO95407 300 aa7.05□□□□□ -1.28
MSH4-201ENST00000263187 RPL11P62913 178 aaKnown RBP7.05□□□□□ -1.28
MSH4-201ENST00000263187 Q6AWC8 147 aa7.05□□□□□ -1.28
MSH4-201ENST00000263187 ZNF493Q6ZR52 646 aa7.05□□□□□ -1.28
MSH4-201ENST00000263187 LCNL1Q6ZST4 164 aa7.05□□□□□ -1.28
MSH4-201ENST00000263187 TTC9CQ8N5M4 171 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms