RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 ZANQ9Y493 2812 aa11.35□□□□□ -0.59
SFSWAP-201ENST00000261674 ZFHX3Q15911 3703 aa11.35□□□□□ -0.59
SFSWAP-201ENST00000261674 ANKRD39Q53RE8 183 aa11.34□□□□□ -0.59
SFSWAP-201ENST00000261674 PRSS57Q6UWY2 283 aa11.34□□□□□ -0.59
SFSWAP-201ENST00000261674 C1RLQ9NZP8 487 aa11.34□□□□□ -0.59
SFSWAP-201ENST00000261674 MSRB1Q9NZV6 116 aa11.34□□□□□ -0.59
SFSWAP-201ENST00000261674 MFAP4P55083 255 aa11.34□□□□□ -0.59
SFSWAP-201ENST00000261674 PSG9Q00887 426 aa11.34□□□□□ -0.59
SFSWAP-201ENST00000261674 THYN1Q9P016 225 aa11.33□□□□□ -0.59
SFSWAP-201ENST00000261674 TRAV8-6A0A0B4J262 113 aa11.33□□□□□ -0.6
SFSWAP-201ENST00000261674 RBX1P62877 108 aa11.33□□□□□ -0.6
SFSWAP-201ENST00000261674 VGLL1Q99990 258 aa11.33□□□□□ -0.6
SFSWAP-201ENST00000261674 C7orf71A4D174 169 aa11.33□□□□□ -0.6
SFSWAP-201ENST00000261674 RHOGP84095 191 aa11.33□□□□□ -0.6
SFSWAP-201ENST00000261674 LINC01545Q5VT33 79 aa11.33□□□□□ -0.6
SFSWAP-201ENST00000261674 PVRIGQ6DKI7 326 aa11.33□□□□□ -0.6
SFSWAP-201ENST00000261674 ORMDL3Q8N138 153 aa11.33□□□□□ -0.6
SFSWAP-201ENST00000261674 C21orf62Q9NYP8 219 aa11.33□□□□□ -0.6
SFSWAP-201ENST00000261674 TRAV30A0A087WSZ9 112 aa11.32□□□□□ -0.6
SFSWAP-201ENST00000261674 HIST1H1AQ02539 215 aaPredicted RBP11.32□□□□□ -0.6
SFSWAP-201ENST00000261674 DEFB125Q8N687 156 aa11.32□□□□□ -0.6
SFSWAP-201ENST00000261674 EVI2AP22794 236 aa11.32□□□□□ -0.6
SFSWAP-201ENST00000261674 UBR5O95071 2799 aaPredicted RBP11.32□□□□□ -0.6
SFSWAP-201ENST00000261674 EGR2P11161 476 aaPredicted RBP11.31□□□□□ -0.6
SFSWAP-201ENST00000261674 NDPQ00604 133 aa11.31□□□□□ -0.6
SFSWAP-201ENST00000261674 ERCC8Q13216 396 aa11.31□□□□□ -0.6
SFSWAP-201ENST00000261674 MRPL51Q4U2R6 128 aaKnown RBP11.31□□□□□ -0.6
SFSWAP-201ENST00000261674 S100A7P31151 101 aa11.31□□□□□ -0.6
SFSWAP-201ENST00000261674 C5orf64Q2M2E5 130 aa11.31□□□□□ -0.6
SFSWAP-201ENST00000261674 FAM104BQ5XKR9 115 aa11.31□□□□□ -0.6
SFSWAP-201ENST00000261674 MS4A6AQ9H2W1 248 aa11.31□□□□□ -0.6
SFSWAP-201ENST00000261674 ZNF207O43670 478 aaKnown RBP11.31□□□□□ -0.6
SFSWAP-201ENST00000261674 NPYP01303 97 aa11.31□□□□□ -0.6
SFSWAP-201ENST00000261674 COX8AP10176 69 aa11.31□□□□□ -0.6
SFSWAP-201ENST00000261674 ZNF80P51504 273 aaPredicted RBP11.31□□□□□ -0.6
SFSWAP-201ENST00000261674 ECSCRQ19T08 205 aa11.31□□□□□ -0.6
SFSWAP-201ENST00000261674 TMEM97Q5BJF2 176 aa11.31□□□□□ -0.6
SFSWAP-201ENST00000261674 FANCD2OSQ96PS1 177 aa11.31□□□□□ -0.6
SFSWAP-201ENST00000261674 FER1L6-AS1Q8NA97 138 aa11.3□□□□□ -0.6
SFSWAP-201ENST00000261674 ARPC1AQ92747 370 aa11.3□□□□□ -0.6
SFSWAP-201ENST00000261674 CEACAM3P40198 252 aa11.3□□□□□ -0.6
SFSWAP-201ENST00000261674 SRSF1Q07955 248 aaKnown RBP eCLIP11.3□□□□□ -0.65e-8■■■□□ 18.4
SFSWAP-201ENST00000261674 RABAC1Q9UI14 185 aa11.3□□□□□ -0.6
SFSWAP-201ENST00000261674 ITPR2Q14571 2701 aa11.3□□□□□ -0.6
SFSWAP-201ENST00000261674 SONP18583 2426 aaKnown RBP11.3□□□□□ -0.6
SFSWAP-201ENST00000261674 GAS8-AS1O95177 125 aa11.3□□□□□ -0.6
SFSWAP-201ENST00000261674 RNF182Q8N6D2 247 aa11.3□□□□□ -0.6
SFSWAP-201ENST00000261674 GAGE10A6NGK3 116 aa11.29□□□□□ -0.6
SFSWAP-201ENST00000261674 J3KRW8 73 aa11.29□□□□□ -0.6
SFSWAP-201ENST00000261674 OVOL3O00110 214 aa11.29□□□□□ -0.6
SFSWAP-201ENST00000261674 PRSS1P07477 247 aa11.29□□□□□ -0.6
SFSWAP-201ENST00000261674 TIMD4Q96H15 378 aa11.29□□□□□ -0.6
SFSWAP-201ENST00000261674 PRR25Q96S07 402 aa11.29□□□□□ -0.6
SFSWAP-201ENST00000261674 TTTY13Q9BZ97 58 aa11.29□□□□□ -0.6
SFSWAP-201ENST00000261674 CST9LQ9H4G1 147 aa11.29□□□□□ -0.6
SFSWAP-201ENST00000261674 ANKRD17O75179 2603 aaKnown RBP11.29□□□□□ -0.6
SFSWAP-201ENST00000261674 A0A096LNJ9 63 aa11.29□□□□□ -0.6
SFSWAP-201ENST00000261674 H3BUT2 72 aa11.29□□□□□ -0.6
SFSWAP-201ENST00000261674 GATA1P15976 413 aaPredicted RBP11.29□□□□□ -0.6
SFSWAP-201ENST00000261674 PCP2Q8IVA1 136 aa11.29□□□□□ -0.6
SFSWAP-201ENST00000261674 DYNAPQ8N1N2 210 aa11.29□□□□□ -0.6
SFSWAP-201ENST00000261674 LYPD1Q8N2G4 141 aa11.29□□□□□ -0.6
SFSWAP-201ENST00000261674 IFI27L1Q96BM0 104 aa11.29□□□□□ -0.6
SFSWAP-201ENST00000261674 DKK2Q9UBU2 259 aa11.29□□□□□ -0.6
SFSWAP-201ENST00000261674 GAGE12BA1L429 117 aa11.28□□□□□ -0.6
SFSWAP-201ENST00000261674 CD5LO43866 347 aa11.28□□□□□ -0.6
SFSWAP-201ENST00000261674 HOXB4P17483 251 aaPredicted RBP11.28□□□□□ -0.6
SFSWAP-201ENST00000261674 RPL7P18124 248 aaKnown RBP11.28□□□□□ -0.6
SFSWAP-201ENST00000261674 C2orf91Q6ZV80 131 aa11.28□□□□□ -0.6
SFSWAP-201ENST00000261674 RAB1BQ9H0U4 201 aa11.28□□□□□ -0.6
SFSWAP-201ENST00000261674 ACANP16112 2415 aa11.28□□□□□ -0.6
SFSWAP-201ENST00000261674 LY6LH3BQJ8 138 aa11.28□□□□□ -0.6
SFSWAP-201ENST00000261674 HBDP02042 147 aa11.28□□□□□ -0.6
SFSWAP-201ENST00000261674 Q6AWC8 147 aa11.28□□□□□ -0.6
SFSWAP-201ENST00000261674 S100A7AQ86SG5 101 aa11.28□□□□□ -0.6
SFSWAP-201ENST00000261674 MRPS12O15235 138 aaKnown RBP11.27□□□□□ -0.61
SFSWAP-201ENST00000261674 PEF1Q9UBV8 284 aaKnown RBP11.27□□□□□ -0.61
SFSWAP-201ENST00000261674 KMT2BQ9UMN6 2715 aaPredicted RBP11.27□□□□□ -0.61
SFSWAP-201ENST00000261674 WI2-2373I1.2A0A1W2PRP0 233 aa11.27□□□□□ -0.61
SFSWAP-201ENST00000261674 A0A1B0GW15 77 aa11.26□□□□□ -0.61
SFSWAP-201ENST00000261674 PRAC2D3DTV9 90 aa11.26□□□□□ -0.61
SFSWAP-201ENST00000261674 SAPCD1Q5SSQ6 148 aa11.26□□□□□ -0.61
SFSWAP-201ENST00000261674 C16orf54Q6UWD8 224 aa11.26□□□□□ -0.61
SFSWAP-201ENST00000261674 RNF5Q99942 180 aa11.26□□□□□ -0.61
SFSWAP-201ENST00000261674 FBXL19-AS1Q494R0 122 aa11.26□□□□□ -0.61
SFSWAP-201ENST00000261674 CFHR4Q92496 578 aa11.26□□□□□ -0.61
SFSWAP-201ENST00000261674 IGLV11-55A0A075B6I3 123 aa11.26□□□□□ -0.61
SFSWAP-201ENST00000261674 K7EP13 123 aa11.26□□□□□ -0.61
SFSWAP-201ENST00000261674 OCIAD2Q56VL3 154 aa11.26□□□□□ -0.61
SFSWAP-201ENST00000261674 ZNF562Q6V9R5 426 aa11.26□□□□□ -0.61
SFSWAP-201ENST00000261674 PIP4P2Q8N4L2 257 aa11.26□□□□□ -0.61
SFSWAP-201ENST00000261674 MAPK1IP1LQ8NDC0 245 aa11.26□□□□□ -0.61
SFSWAP-201ENST00000261674 SORL1Q92673 2214 aa11.25□□□□□ -0.61
SFSWAP-201ENST00000261674 CLEC3BP05452 202 aa11.25□□□□□ -0.61
SFSWAP-201ENST00000261674 UFC1Q9Y3C8 167 aa11.25□□□□□ -0.61
SFSWAP-201ENST00000261674 CTSGP08311 255 aa11.25□□□□□ -0.61
SFSWAP-201ENST00000261674 BMI1P35226 326 aa11.25□□□□□ -0.61
SFSWAP-201ENST00000261674 LEPP41159 167 aa11.25□□□□□ -0.61
SFSWAP-201ENST00000261674 F8W735 103 aaPredicted RBP11.24□□□□□ -0.61
SFSWAP-201ENST00000261674 K7EMI3 77 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 198.3 ms