RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 TMEM78Q5T7P6 136 aa12.6□□□□□ -0.39
SLC6A8-201ENST00000253122 GFRALQ6UXV0 394 aa12.6□□□□□ -0.39
SLC6A8-201ENST00000253122 C21orf62Q9NYP8 219 aa12.59□□□□□ -0.39
SLC6A8-201ENST00000253122 F5H697 171 aa12.59□□□□□ -0.39
SLC6A8-201ENST00000253122 IGFBPL1Q8WX77 278 aa12.59□□□□□ -0.39
SLC6A8-201ENST00000253122 IGHV1-3A0A0C4DH29 117 aa12.59□□□□□ -0.39
SLC6A8-201ENST00000253122 M0R381 172 aa12.59□□□□□ -0.39
SLC6A8-201ENST00000253122 TIMM23O14925 209 aa12.59□□□□□ -0.39
SLC6A8-201ENST00000253122 SMIM17P0DL12 118 aa12.59□□□□□ -0.39
SLC6A8-201ENST00000253122 CEACAM3P40198 252 aa12.59□□□□□ -0.39
SLC6A8-201ENST00000253122 PVRIGQ6DKI7 326 aa12.59□□□□□ -0.39
SLC6A8-201ENST00000253122 RAB1BQ9H0U4 201 aa12.59□□□□□ -0.39
SLC6A8-201ENST00000253122 MSRB1Q9NZV6 116 aa12.59□□□□□ -0.39
SLC6A8-201ENST00000253122 CACNA1AO00555 2505 aa12.58□□□□□ -0.4
SLC6A8-201ENST00000253122 TMEM178BH3BS89 294 aa12.58□□□□□ -0.4
SLC6A8-201ENST00000253122 TNFRSF6BO95407 300 aa12.58□□□□□ -0.4
SLC6A8-201ENST00000253122 GATA1P15976 413 aaPredicted RBP12.58□□□□□ -0.4
SLC6A8-201ENST00000253122 Q71RC1 249 aaPredicted RBP12.58□□□□□ -0.4
SLC6A8-201ENST00000253122 SCGB3A1Q96QR1 104 aa12.58□□□□□ -0.4
SLC6A8-201ENST00000253122 WDFY3Q8IZQ1 3526 aa12.58□□□□□ -0.4
SLC6A8-201ENST00000253122 ANKHD1Q8IWZ3 2542 aaKnown RBP12.58□□□□□ -0.4
SLC6A8-201ENST00000253122 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.58□□□□□ -0.4
SLC6A8-201ENST00000253122 GATA4P43694 442 aa12.58□□□□□ -0.4
SLC6A8-201ENST00000253122 PCSK5Q92824 1860 aa12.58□□□□□ -0.4
SLC6A8-201ENST00000253122 FAM208BQ5VWN6 2430 aa12.57□□□□□ -0.4
SLC6A8-201ENST00000253122 TIMD4Q96H15 378 aa12.57□□□□□ -0.4
SLC6A8-201ENST00000253122 RAXQ9Y2V3 346 aa12.57□□□□□ -0.4
SLC6A8-201ENST00000253122 CD300EQ496F6 205 aaPredicted RBP12.57□□□□□ -0.4
SLC6A8-201ENST00000253122 TMEM238LA0A1B0GVL6 79 aa12.57□□□□□ -0.4
SLC6A8-201ENST00000253122 A6NJY4 79 aa12.57□□□□□ -0.4
SLC6A8-201ENST00000253122 FOXE3Q13461 319 aa12.56□□□□□ -0.4
SLC6A8-201ENST00000253122 NDUFS8O00217 210 aa12.56□□□□□ -0.4
SLC6A8-201ENST00000253122 APOBEC3AP31941 199 aaPredicted RBP12.56□□□□□ -0.4
SLC6A8-201ENST00000253122 ERCC8Q13216 396 aa12.56□□□□□ -0.4
SLC6A8-201ENST00000253122 RUSC1-AS1Q66K80 236 aa12.56□□□□□ -0.4
SLC6A8-201ENST00000253122 MRPL35Q9NZE8 188 aaKnown RBP12.56□□□□□ -0.4
SLC6A8-201ENST00000253122 IGLV3-9A0A075B6K5 115 aa12.56□□□□□ -0.4
SLC6A8-201ENST00000253122 TRBV25-1A0A075B6N4 114 aa12.56□□□□□ -0.4
SLC6A8-201ENST00000253122 HOXA3O43365 443 aaPredicted RBP12.56□□□□□ -0.4
SLC6A8-201ENST00000253122 LYRM7Q5U5X0 104 aa12.55□□□□□ -0.4
SLC6A8-201ENST00000253122 MAP1AP78559 2803 aaPredicted RBP12.55□□□□□ -0.4
SLC6A8-201ENST00000253122 ADIPOQQ15848 244 aa12.55□□□□□ -0.4
SLC6A8-201ENST00000253122 TLN2Q9Y4G6 2542 aa12.55□□□□□ -0.4
SLC6A8-201ENST00000253122 IGKV1-17P01599 117 aa12.55□□□□□ -0.4
SLC6A8-201ENST00000253122 EGR2P11161 476 aaPredicted RBP12.55□□□□□ -0.4
SLC6A8-201ENST00000253122 HLA-DMBP28068 263 aa12.55□□□□□ -0.4
SLC6A8-201ENST00000253122 MYCNOSP40205 109 aa12.55□□□□□ -0.4
SLC6A8-201ENST00000253122 C7orf69Q9H7B7 122 aa12.55□□□□□ -0.4
SLC6A8-201ENST00000253122 SIVA1O15304 175 aa12.54□□□□□ -0.4
SLC6A8-201ENST00000253122 CD3EP07766 207 aa12.54□□□□□ -0.4
SLC6A8-201ENST00000253122 PSMG4Q5JS54 123 aa12.54□□□□□ -0.4
SLC6A8-201ENST00000253122 LYPD1Q8N2G4 141 aa12.54□□□□□ -0.4
SLC6A8-201ENST00000253122 SRSF8Q9BRL6 282 aaKnown RBP12.54□□□□□ -0.4
SLC6A8-201ENST00000253122 TRAV26-2A0A0B4J265 109 aa12.54□□□□□ -0.4
SLC6A8-201ENST00000253122 RAB9AP51151 201 aa12.54□□□□□ -0.4
SLC6A8-201ENST00000253122 PRR25Q96S07 402 aa12.54□□□□□ -0.4
SLC6A8-201ENST00000253122 PGPEP1Q9NXJ5 209 aa12.54□□□□□ -0.4
SLC6A8-201ENST00000253122 TMEM14CQ9P0S9 112 aa12.54□□□□□ -0.4
SLC6A8-201ENST00000253122 MUC3AQ02505 3323 aa12.54□□□□□ -0.4
SLC6A8-201ENST00000253122 NBR2O15453 112 aa12.53□□□□□ -0.4
SLC6A8-201ENST00000253122 SIGLEC15Q6ZMC9 328 aa12.53□□□□□ -0.4
SLC6A8-201ENST00000253122 RNASE6Q93091 150 aaKnown RBP12.53□□□□□ -0.4
SLC6A8-201ENST00000253122 LOXP28300 417 aaPredicted RBP12.53□□□□□ -0.4
SLC6A8-201ENST00000253122 EFNA4P52798 201 aa12.53□□□□□ -0.4
SLC6A8-201ENST00000253122 IGFL2Q6UWQ7 119 aa12.53□□□□□ -0.4
SLC6A8-201ENST00000253122 DPM3Q9P2X0 92 aa12.53□□□□□ -0.4
SLC6A8-201ENST00000253122 NCOR2Q9Y618 2525 aa12.53□□□□□ -0.4
SLC6A8-201ENST00000253122 CEND1Q8N111 149 aa12.53□□□□□ -0.4
SLC6A8-201ENST00000253122 ZNF491Q8N8L2 437 aa12.53□□□□□ -0.4
SLC6A8-201ENST00000253122 TNFRSF14Q92956 283 aa12.53□□□□□ -0.4
SLC6A8-201ENST00000253122 ATP6V0BQ99437 205 aa12.53□□□□□ -0.4
SLC6A8-201ENST00000253122 FAM90A27PA6NNH2 459 aa12.52□□□□□ -0.4
SLC6A8-201ENST00000253122 IGLV2-23P01705 113 aa12.52□□□□□ -0.4
SLC6A8-201ENST00000253122 LAGE3Q14657 143 aa12.52□□□□□ -0.4
SLC6A8-201ENST00000253122 MYO18BQ8IUG5 2567 aa12.52□□□□□ -0.41
SLC6A8-201ENST00000253122 MBD3L4A6NDZ8 208 aaPredicted RBP12.52□□□□□ -0.41
SLC6A8-201ENST00000253122 MBD3L3A6NE82 208 aaPredicted RBP12.52□□□□□ -0.41
SLC6A8-201ENST00000253122 MBD3L5A6NJ08 208 aaPredicted RBP12.52□□□□□ -0.41
SLC6A8-201ENST00000253122 ZNF815PA8K554 130 aa12.52□□□□□ -0.41
SLC6A8-201ENST00000253122 HERVK_113P61574 105 aa12.52□□□□□ -0.41
SLC6A8-201ENST00000253122 MBD3L2Q8NHZ7 208 aaPredicted RBP12.52□□□□□ -0.41
SLC6A8-201ENST00000253122 C16orf92Q96LL3 132 aa12.52□□□□□ -0.41
SLC6A8-201ENST00000253122 BEX4Q9NWD9 120 aaPredicted RBP12.52□□□□□ -0.41
SLC6A8-201ENST00000253122 DKK4Q9UBT3 224 aa12.52□□□□□ -0.41
SLC6A8-201ENST00000253122 PHLDA3Q9Y5J5 127 aa12.52□□□□□ -0.41
SLC6A8-201ENST00000253122 BUB1B-PAK6H3BSN5 160 aa12.52□□□□□ -0.41
SLC6A8-201ENST00000253122 SMPXQ9UHP9 88 aa12.52□□□□□ -0.41
SLC6A8-201ENST00000253122 ARHGAP32A7KAX9 2087 aa12.52□□□□□ -0.41
SLC6A8-201ENST00000253122 ZNF562Q6V9R5 426 aa12.51□□□□□ -0.41
SLC6A8-201ENST00000253122 F8W1H4 67 aa12.51□□□□□ -0.41
SLC6A8-201ENST00000253122 H3BRN7 92 aa12.51□□□□□ -0.41
SLC6A8-201ENST00000253122 SPINK8P0C7L1 97 aa12.51□□□□□ -0.41
SLC6A8-201ENST00000253122 HTN1P15515 57 aa12.51□□□□□ -0.41
SLC6A8-201ENST00000253122 DLX6P56179 175 aa12.51□□□□□ -0.41
SLC6A8-201ENST00000253122 ATP5G2Q06055 141 aa12.51□□□□□ -0.41
SLC6A8-201ENST00000253122 SRSF1Q07955 248 aaKnown RBP eCLIP12.51□□□□□ -0.413e-7■■□□□ 13.2
SLC6A8-201ENST00000253122 TMEM155Q4W5P6 130 aa12.51□□□□□ -0.41
SLC6A8-201ENST00000253122 TEX36Q5VZQ5 186 aa12.51□□□□□ -0.41
SLC6A8-201ENST00000253122 CFAP47Q6ZTR5 3102 aa12.51□□□□□ -0.41
SLC6A8-201ENST00000253122 EMP1P54849 157 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms