RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 Q6AWC8 147 aa16.64■□□□□ 0.25
CLN6-201ENST00000249806 UNQ9165/PRO28630Q6UXU0 137 aa16.64■□□□□ 0.25
CLN6-201ENST00000249806 LCNL1Q6ZST4 164 aa16.64■□□□□ 0.25
CLN6-201ENST00000249806 VAMP8Q9BV40 100 aa16.64■□□□□ 0.25
CLN6-201ENST00000249806 UBR5O95071 2799 aaPredicted RBP16.64■□□□□ 0.25
CLN6-201ENST00000249806 IGHV3-11P01762 117 aa16.64■□□□□ 0.25
CLN6-201ENST00000249806 EBLN2Q6P2I7 272 aa16.64■□□□□ 0.25
CLN6-201ENST00000249806 ZNF575Q86XF7 245 aa16.64■□□□□ 0.25
CLN6-201ENST00000249806 MAPK1IP1LQ8NDC0 245 aa16.64■□□□□ 0.25
CLN6-201ENST00000249806 SLC50A1Q9BRV3 221 aa16.64■□□□□ 0.25
CLN6-201ENST00000249806 TMEM213A2RRL7 107 aa16.63■□□□□ 0.25
CLN6-201ENST00000249806 FAM181BA6NEQ2 426 aa16.63■□□□□ 0.25
CLN6-201ENST00000249806 C8orf86Q6ZUL3 223 aa16.63■□□□□ 0.25
CLN6-201ENST00000249806 DSCR9P59020 149 aa16.62■□□□□ 0.25
CLN6-201ENST00000249806 LINC00614P0C842 121 aa16.61■□□□□ 0.25
CLN6-201ENST00000249806 PF4V1P10720 104 aa16.61■□□□□ 0.25
CLN6-201ENST00000249806 BMI1P35226 326 aa16.61■□□□□ 0.25
CLN6-201ENST00000249806 IL17RELQ6ZVW7 336 aa16.61■□□□□ 0.25
CLN6-201ENST00000249806 GATD1Q8NB37 220 aa16.61■□□□□ 0.25
CLN6-201ENST00000249806 ATP6V0BQ99437 205 aa16.61■□□□□ 0.25
CLN6-201ENST00000249806 CLEC5AQ9NY25 188 aa16.61■□□□□ 0.25
CLN6-201ENST00000249806 PTPN13Q12923 2485 aa16.61■□□□□ 0.25
CLN6-201ENST00000249806 EPG5Q9HCE0 2579 aa16.61■□□□□ 0.25
CLN6-201ENST00000249806 CSN3P07498 182 aa16.61■□□□□ 0.25
CLN6-201ENST00000249806 ZNF843Q8N446 348 aa16.61■□□□□ 0.25
CLN6-201ENST00000249806 A0A1B0GW15 77 aa16.6■□□□□ 0.25
CLN6-201ENST00000249806 M0QZK8 103 aa16.6■□□□□ 0.25
CLN6-201ENST00000249806 SMAD7O15105 426 aaKnown RBP16.6■□□□□ 0.25
CLN6-201ENST00000249806 C20orf144Q9BQM9 153 aa16.6■□□□□ 0.25
CLN6-201ENST00000249806 AGPAT4-IT1Q9H0P7 198 aa16.6■□□□□ 0.25
CLN6-201ENST00000249806 C2orf70A6NJV1 201 aa16.6■□□□□ 0.25
CLN6-201ENST00000249806 ORM1P02763 201 aa16.6■□□□□ 0.25
CLN6-201ENST00000249806 COX6B1P14854 86 aa16.6■□□□□ 0.25
CLN6-201ENST00000249806 SLC25A16P16260 332 aa16.6■□□□□ 0.25
CLN6-201ENST00000249806 IGHV1-24A0A0C4DH33 117 aa16.59■□□□□ 0.25
CLN6-201ENST00000249806 RBAKDNA6NC62 111 aa16.59■□□□□ 0.25
CLN6-201ENST00000249806 ATOH7Q8N100 152 aa16.59■□□□□ 0.25
CLN6-201ENST00000249806 CHCHD1Q96BP2 118 aaKnown RBP16.59■□□□□ 0.25
CLN6-201ENST00000249806 FABP5P3A8MUU1 101 aa16.58■□□□□ 0.25
CLN6-201ENST00000249806 ZNF493Q6ZR52 646 aa16.58■□□□□ 0.25
CLN6-201ENST00000249806 GLMPQ8WWB7 406 aa16.58■□□□□ 0.25
CLN6-201ENST00000249806 ABCA12Q86UK0 2595 aa16.58■□□□□ 0.24
CLN6-201ENST00000249806 A0A096LNT2 108 aa16.58■□□□□ 0.24
CLN6-201ENST00000249806 GATA3P23771 443 aa16.58■□□□□ 0.24
CLN6-201ENST00000249806 LINC01356Q8N9X3 169 aa16.58■□□□□ 0.24
CLN6-201ENST00000249806 USMG5Q96IX5 58 aa16.58■□□□□ 0.24
CLN6-201ENST00000249806 TMEM95Q3KNT9 176 aa16.57■□□□□ 0.24
CLN6-201ENST00000249806 FER1L6-AS1Q8NA97 138 aa16.57■□□□□ 0.24
CLN6-201ENST00000249806 NDUFA4O00483 81 aa16.57■□□□□ 0.24
CLN6-201ENST00000249806 BTF3P20290 206 aaKnown RBP16.57■□□□□ 0.24
CLN6-201ENST00000249806 DEFB112Q30KQ8 113 aa16.57■□□□□ 0.24
CLN6-201ENST00000249806 ZNF705AQ6ZN79 300 aaPredicted RBP16.57■□□□□ 0.24
CLN6-201ENST00000249806 LINC00173Q6ZV60 143 aa16.57■□□□□ 0.24
CLN6-201ENST00000249806 AMN1Q8IY45 258 aa16.57■□□□□ 0.24
CLN6-201ENST00000249806 OR4X2Q8NGF9 303 aa16.57■□□□□ 0.24
CLN6-201ENST00000249806 H3BUA1 57 aa16.56■□□□□ 0.24
CLN6-201ENST00000249806 TGFAP01135 160 aa16.56■□□□□ 0.24
CLN6-201ENST00000249806 IGHV4-59P01825 116 aa16.56■□□□□ 0.24
CLN6-201ENST00000249806 C16orf92Q96LL3 132 aa16.56■□□□□ 0.24
CLN6-201ENST00000249806 PSMG3-AS1Q96PY0 264 aa16.56■□□□□ 0.24
CLN6-201ENST00000249806 EREGO14944 169 aa16.55■□□□□ 0.24
CLN6-201ENST00000249806 BRI3O95415 125 aa16.55■□□□□ 0.24
CLN6-201ENST00000249806 IGLV1-40P01703 118 aa16.55■□□□□ 0.24
CLN6-201ENST00000249806 IGLC6P0CF74 106 aa16.55■□□□□ 0.24
CLN6-201ENST00000249806 SPATA12Q7Z6I5 190 aa16.55■□□□□ 0.24
CLN6-201ENST00000249806 MIEN1Q9BRT3 115 aa16.55■□□□□ 0.24
CLN6-201ENST00000249806 CTRLP40313 264 aa16.55■□□□□ 0.24
CLN6-201ENST00000249806 KRTAP10-9P60411 292 aa16.55■□□□□ 0.24
CLN6-201ENST00000249806 RPS20P60866 119 aaKnown RBP16.55■□□□□ 0.24
CLN6-201ENST00000249806 TWIST1Q15672 202 aa16.55■□□□□ 0.24
CLN6-201ENST00000249806 MAJINQ3KP22 176 aa16.55■□□□□ 0.24
CLN6-201ENST00000249806 SPATA45Q537H7 98 aa16.55■□□□□ 0.24
CLN6-201ENST00000249806 TMEM78Q5T7P6 136 aa16.54■□□□□ 0.24
CLN6-201ENST00000249806 FAM104BQ5XKR9 115 aa16.54■□□□□ 0.24
CLN6-201ENST00000249806 C20orf173Q96LM9 149 aa16.54■□□□□ 0.24
CLN6-201ENST00000249806 MSRB1Q9NZV6 116 aa16.54■□□□□ 0.24
CLN6-201ENST00000249806 A0A1B0GV90 55 aa16.54■□□□□ 0.24
CLN6-201ENST00000249806 D6R8Y8 96 aa16.54■□□□□ 0.24
CLN6-201ENST00000249806 GPHB5Q86YW7 130 aa16.54■□□□□ 0.24
CLN6-201ENST00000249806 SNHG12Q9BXW3 62 aa16.54■□□□□ 0.24
CLN6-201ENST00000249806 LEPROTL1O95214 131 aa16.53■□□□□ 0.24
CLN6-201ENST00000249806 LURAP1LQ8IV03 231 aa16.53■□□□□ 0.24
CLN6-201ENST00000249806 MRPL53Q96EL3 112 aaKnown RBP16.53■□□□□ 0.24
CLN6-201ENST00000249806 SELENOKQ9Y6D0 94 aa16.53■□□□□ 0.24
CLN6-201ENST00000249806 MXRA5Q9NR99 2828 aa16.53■□□□□ 0.24
CLN6-201ENST00000249806 CFHR3Q02985 330 aa16.53■□□□□ 0.24
CLN6-201ENST00000249806 Q6ZQT7 251 aa16.53■□□□□ 0.24
CLN6-201ENST00000249806 C11orf21Q9P2W6 132 aa16.53■□□□□ 0.24
CLN6-201ENST00000249806 RNF223E7ERA6 249 aa16.52■□□□□ 0.24
CLN6-201ENST00000249806 SRSF2Q01130 221 aaKnown RBP16.52■□□□□ 0.24
CLN6-201ENST00000249806 TMEM70Q9BUB7 260 aa16.52■□□□□ 0.24
CLN6-201ENST00000249806 NPFFR1Q9GZQ6 430 aa16.52■□□□□ 0.24
CLN6-201ENST00000249806 IGKV3D-20A0A0C4DH25 116 aa16.51■□□□□ 0.23
CLN6-201ENST00000249806 LINC01559Q495D7 138 aa16.51■□□□□ 0.23
CLN6-201ENST00000249806 C9orf47Q6ZRZ4 202 aa16.51■□□□□ 0.23
CLN6-201ENST00000249806 TIMM8BQ9Y5J9 83 aaPredicted RBP16.51■□□□□ 0.23
CLN6-201ENST00000249806 DOPEY2Q9Y3R5 2298 aa16.51■□□□□ 0.23
CLN6-201ENST00000249806 MRPL51Q4U2R6 128 aaKnown RBP16.51■□□□□ 0.23
CLN6-201ENST00000249806 C2orf88Q9BSF0 95 aa16.51■□□□□ 0.23
CLN6-201ENST00000249806 NAV2Q8IVL1 2488 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms