RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 UBTD1Q9HAC8 227 aa16.77■□□□□ 0.27
SH2D3A-201ENST00000245908 NBASA2RRP1 2371 aa16.76■□□□□ 0.27
SH2D3A-201ENST00000245908 IGHV3OR16-8A0A075B7F1 116 aa16.76■□□□□ 0.27
SH2D3A-201ENST00000245908 SAA4P35542 130 aa16.76■□□□□ 0.27
SH2D3A-201ENST00000245908 SRSF2Q01130 221 aaKnown RBP16.76■□□□□ 0.27
SH2D3A-201ENST00000245908 AMN1Q8IY45 258 aa16.76■□□□□ 0.27
SH2D3A-201ENST00000245908 IGHV3-35A0A0C4DH35 117 aa16.76■□□□□ 0.27
SH2D3A-201ENST00000245908 IFI27P40305 119 aaPredicted RBP16.76■□□□□ 0.27
SH2D3A-201ENST00000245908 RAB9AP51151 201 aa16.76■□□□□ 0.27
SH2D3A-201ENST00000245908 ORMDL3Q8N138 153 aa16.76■□□□□ 0.27
SH2D3A-201ENST00000245908 PRELID3AQ96N28 172 aa16.76■□□□□ 0.27
SH2D3A-201ENST00000245908 IGLC6P0CF74 106 aa16.75■□□□□ 0.27
SH2D3A-201ENST00000245908 SEC11AP67812 179 aa16.75■□□□□ 0.27
SH2D3A-201ENST00000245908 FER1L6-AS1Q8NA97 138 aa16.75■□□□□ 0.27
SH2D3A-201ENST00000245908 MCRIP2Q9BUT9 160 aaKnown RBP16.75■□□□□ 0.27
SH2D3A-201ENST00000245908 SIGLEC8Q9NYZ4 499 aa16.75■□□□□ 0.27
SH2D3A-201ENST00000245908 TIMM8BQ9Y5J9 83 aaPredicted RBP16.75■□□□□ 0.27
SH2D3A-201ENST00000245908 WNK2Q9Y3S1 2297 aa16.75■□□□□ 0.27
SH2D3A-201ENST00000245908 LMO4P61968 165 aa16.75■□□□□ 0.27
SH2D3A-201ENST00000245908 MRPL51Q4U2R6 128 aaKnown RBP16.75■□□□□ 0.27
SH2D3A-201ENST00000245908 UFSP1Q6NVU6 142 aa16.75■□□□□ 0.27
SH2D3A-201ENST00000245908 ATRXP46100 2492 aa16.74■□□□□ 0.27
SH2D3A-201ENST00000245908 A0A096LNJ9 63 aa16.74■□□□□ 0.27
SH2D3A-201ENST00000245908 C7orf71A4D174 169 aa16.74■□□□□ 0.27
SH2D3A-201ENST00000245908 H0Y8G0 127 aa16.74■□□□□ 0.27
SH2D3A-201ENST00000245908 BUB3O43684 328 aa16.74■□□□□ 0.27
SH2D3A-201ENST00000245908 ZNF575Q86XF7 245 aa16.74■□□□□ 0.27
SH2D3A-201ENST00000245908 CLEC3BP05452 202 aa16.73■□□□□ 0.27
SH2D3A-201ENST00000245908 FAM106AQ4KMX7 169 aa16.73■□□□□ 0.27
SH2D3A-201ENST00000245908 PSMG3-AS1Q96PY0 264 aa16.73■□□□□ 0.27
SH2D3A-201ENST00000245908 GAGE10A6NGK3 116 aa16.73■□□□□ 0.27
SH2D3A-201ENST00000245908 GTF2H5Q6ZYL4 71 aa16.73■□□□□ 0.27
SH2D3A-201ENST00000245908 GOSR1O95249 250 aa16.72■□□□□ 0.27
SH2D3A-201ENST00000245908 COX8AP10176 69 aa16.72■□□□□ 0.27
SH2D3A-201ENST00000245908 LOXL1Q08397 574 aaPredicted RBP16.72■□□□□ 0.27
SH2D3A-201ENST00000245908 CCDC140Q96MF4 163 aa16.72■□□□□ 0.27
SH2D3A-201ENST00000245908 CENPVL3A0A0U1RRI6 287 aa16.72■□□□□ 0.27
SH2D3A-201ENST00000245908 G3V4G9 280 aa16.72■□□□□ 0.27
SH2D3A-201ENST00000245908 SAP30O75446 220 aa16.72■□□□□ 0.27
SH2D3A-201ENST00000245908 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.72■□□□□ 0.27
SH2D3A-201ENST00000245908 C2orf91Q6ZV80 131 aa16.72■□□□□ 0.27
SH2D3A-201ENST00000245908 BPESC1Q9GZL8 116 aa16.72■□□□□ 0.27
SH2D3A-201ENST00000245908 LOC389332A0A1B0GUA5 103 aa16.71■□□□□ 0.27
SH2D3A-201ENST00000245908 CLPSL1A2RUU4 121 aa16.71■□□□□ 0.27
SH2D3A-201ENST00000245908 RBAKDNA6NC62 111 aa16.71■□□□□ 0.27
SH2D3A-201ENST00000245908 COL25A1Q9BXS0 654 aaPredicted RBP16.71■□□□□ 0.27
SH2D3A-201ENST00000245908 CSMD1Q96PZ7 3565 aa16.71■□□□□ 0.27
SH2D3A-201ENST00000245908 RIPPLY3P57055 190 aa16.71■□□□□ 0.27
SH2D3A-201ENST00000245908 TWIST1Q15672 202 aa16.71■□□□□ 0.27
SH2D3A-201ENST00000245908 SLC50A1Q9BRV3 221 aa16.71■□□□□ 0.27
SH2D3A-201ENST00000245908 FABP5P3A8MUU1 101 aa16.7■□□□□ 0.26
SH2D3A-201ENST00000245908 PRAC2D3DTV9 90 aa16.7■□□□□ 0.26
SH2D3A-201ENST00000245908 G3V318 75 aa16.7■□□□□ 0.26
SH2D3A-201ENST00000245908 NPFFO15130 113 aa16.7■□□□□ 0.26
SH2D3A-201ENST00000245908 NCR2O95944 276 aa16.7■□□□□ 0.26
SH2D3A-201ENST00000245908 ERCC8Q13216 396 aa16.7■□□□□ 0.26
SH2D3A-201ENST00000245908 CNFNQ9BYD5 112 aa16.7■□□□□ 0.26
SH2D3A-201ENST00000245908 CLEC19AQ6UXS0 136 aa16.7■□□□□ 0.26
SH2D3A-201ENST00000245908 PIP4P2Q8N4L2 257 aa16.7■□□□□ 0.26
SH2D3A-201ENST00000245908 EEF1AKMT3Q96AZ1 226 aa16.7■□□□□ 0.26
SH2D3A-201ENST00000245908 LINC01548A6NM66 108 aa16.69■□□□□ 0.26
SH2D3A-201ENST00000245908 TMEM97Q5BJF2 176 aa16.69■□□□□ 0.26
SH2D3A-201ENST00000245908 ORM1P02763 201 aa16.68■□□□□ 0.26
SH2D3A-201ENST00000245908 PAX8Q06710 450 aa16.68■□□□□ 0.26
SH2D3A-201ENST00000245908 LINC01559Q495D7 138 aa16.68■□□□□ 0.26
SH2D3A-201ENST00000245908 CKS2P33552 79 aa16.68■□□□□ 0.26
SH2D3A-201ENST00000245908 NHLH1Q02575 133 aa16.68■□□□□ 0.26
SH2D3A-201ENST00000245908 CLEC2AQ6UVW9 174 aa16.68■□□□□ 0.26
SH2D3A-201ENST00000245908 RNF182Q8N6D2 247 aa16.68■□□□□ 0.26
SH2D3A-201ENST00000245908 C5orf56Q8N8D9 126 aa16.68■□□□□ 0.26
SH2D3A-201ENST00000245908 COL6A6A6NMZ7 2263 aa16.68■□□□□ 0.26
SH2D3A-201ENST00000245908 TRBV7-1A0A0A6YYK4 115 aa16.67■□□□□ 0.26
SH2D3A-201ENST00000245908 C9orf118A6NHY6 69 aa16.67■□□□□ 0.26
SH2D3A-201ENST00000245908 H3BRM9 83 aa16.67■□□□□ 0.26
SH2D3A-201ENST00000245908 NPYP01303 97 aa16.67■□□□□ 0.26
SH2D3A-201ENST00000245908 LY6DQ14210 128 aa16.67■□□□□ 0.26
SH2D3A-201ENST00000245908 SMKR1H3BMG3 65 aa16.66■□□□□ 0.26
SH2D3A-201ENST00000245908 OR8A1Q8NGG7 326 aa16.66■□□□□ 0.26
SH2D3A-201ENST00000245908 ITLN2Q8WWU7 325 aaPredicted RBP16.66■□□□□ 0.26
SH2D3A-201ENST00000245908 DPF1Q92782 380 aa16.66■□□□□ 0.26
SH2D3A-201ENST00000245908 HIVEP3Q5T1R4 2406 aa16.66■□□□□ 0.26
SH2D3A-201ENST00000245908 IGHV3-66A0A0C4DH42 116 aa16.66■□□□□ 0.26
SH2D3A-201ENST00000245908 K7EP34 96 aa16.66■□□□□ 0.26
SH2D3A-201ENST00000245908 HBDP02042 147 aa16.66■□□□□ 0.26
SH2D3A-201ENST00000245908 IL17RELQ6ZVW7 336 aa16.66■□□□□ 0.26
SH2D3A-201ENST00000245908 RNF185Q96GF1 192 aa16.66■□□□□ 0.26
SH2D3A-201ENST00000245908 AP1S3Q96PC3 154 aa16.66■□□□□ 0.26
SH2D3A-201ENST00000245908 A6NDN8 102 aa16.65■□□□□ 0.26
SH2D3A-201ENST00000245908 LGALS9BQ3B8N2 356 aa16.65■□□□□ 0.26
SH2D3A-201ENST00000245908 LGALS9CQ6DKI2 356 aa16.65■□□□□ 0.26
SH2D3A-201ENST00000245908 NEGR1Q7Z3B1 354 aa16.65■□□□□ 0.26
SH2D3A-201ENST00000245908 SPTBN1Q01082 2364 aaKnown RBP16.65■□□□□ 0.26
SH2D3A-201ENST00000245908 MED13LQ71F56 2210 aa16.65■□□□□ 0.26
SH2D3A-201ENST00000245908 MRPL53Q96EL3 112 aaKnown RBP16.65■□□□□ 0.26
SH2D3A-201ENST00000245908 METTL26Q96S19 204 aa16.65■□□□□ 0.26
SH2D3A-201ENST00000245908 MSRB1Q9NZV6 116 aa16.65■□□□□ 0.26
SH2D3A-201ENST00000245908 TRAV8-2A0A0B4J237 113 aa16.64■□□□□ 0.25
SH2D3A-201ENST00000245908 U3KQE9 123 aa16.64■□□□□ 0.25
SH2D3A-201ENST00000245908 NPFFR1Q9GZQ6 430 aa16.63■□□□□ 0.25
SH2D3A-201ENST00000245908 JMJD8Q96S16 334 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms