RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 OR10AG1Q8NH19 301 aa11.16□□□□□ -0.62
HIF3A-202ENST00000244303 ZNF747Q9BV97 191 aa11.16□□□□□ -0.62
HIF3A-202ENST00000244303 LOXL1Q08397 574 aaPredicted RBP11.16□□□□□ -0.62
HIF3A-202ENST00000244303 PRELID3AQ96N28 172 aa11.16□□□□□ -0.62
HIF3A-202ENST00000244303 MS4A6AQ9H2W1 248 aa11.16□□□□□ -0.62
HIF3A-202ENST00000244303 SIGLEC8Q9NYZ4 499 aa11.16□□□□□ -0.62
HIF3A-202ENST00000244303 A0A096LNJ9 63 aa11.15□□□□□ -0.62
HIF3A-202ENST00000244303 FAM110DQ8TAY7 271 aaPredicted RBP11.15□□□□□ -0.62
HIF3A-202ENST00000244303 AJUBAQ96IF1 538 aa11.15□□□□□ -0.62
HIF3A-202ENST00000244303 CST9LQ9H4G1 147 aa11.15□□□□□ -0.62
HIF3A-202ENST00000244303 U3KQK5 164 aa11.15□□□□□ -0.62
HIF3A-202ENST00000244303 ATP6V0E1O15342 81 aa11.15□□□□□ -0.62
HIF3A-202ENST00000244303 NCR2O95944 276 aa11.15□□□□□ -0.62
HIF3A-202ENST00000244303 HIST1H1AQ02539 215 aaPredicted RBP11.15□□□□□ -0.62
HIF3A-202ENST00000244303 MRPL51Q4U2R6 128 aaKnown RBP11.15□□□□□ -0.62
HIF3A-202ENST00000244303 ORMDL3Q8N138 153 aa11.15□□□□□ -0.62
HIF3A-202ENST00000244303 ZNF502Q8TBZ5 544 aa11.15□□□□□ -0.62
HIF3A-202ENST00000244303 FBLL1A6NHQ2 334 aaKnown RBP11.14□□□□□ -0.63
HIF3A-202ENST00000244303 UBE2E1P51965 193 aa11.14□□□□□ -0.63
HIF3A-202ENST00000244303 ZFAND3Q9H8U3 227 aa11.14□□□□□ -0.63
HIF3A-202ENST00000244303 SNAI2O43623 268 aa11.14□□□□□ -0.63
HIF3A-202ENST00000244303 CD5LO43866 347 aa11.14□□□□□ -0.63
HIF3A-202ENST00000244303 CLEC3BP05452 202 aa11.14□□□□□ -0.63
HIF3A-202ENST00000244303 BMI1P35226 326 aa11.14□□□□□ -0.63
HIF3A-202ENST00000244303 SAA4P35542 130 aa11.14□□□□□ -0.63
HIF3A-202ENST00000244303 TWIST1Q15672 202 aa11.14□□□□□ -0.63
HIF3A-202ENST00000244303 ZNF575Q86XF7 245 aa11.14□□□□□ -0.63
HIF3A-202ENST00000244303 FER1L6-AS1Q8NA97 138 aa11.14□□□□□ -0.63
HIF3A-202ENST00000244303 ERCC8Q13216 396 aa11.13□□□□□ -0.63
HIF3A-202ENST00000244303 OCIAD2Q56VL3 154 aa11.13□□□□□ -0.63
HIF3A-202ENST00000244303 CACNA1BQ00975 2339 aa11.13□□□□□ -0.63
HIF3A-202ENST00000244303 PRAC2D3DTV9 90 aa11.12□□□□□ -0.63
HIF3A-202ENST00000244303 SMKR1H3BMG3 65 aa11.12□□□□□ -0.63
HIF3A-202ENST00000244303 IGLC6P0CF74 106 aa11.12□□□□□ -0.63
HIF3A-202ENST00000244303 RPS20P60866 119 aaKnown RBP11.12□□□□□ -0.63
HIF3A-202ENST00000244303 RNF182Q8N6D2 247 aa11.12□□□□□ -0.63
HIF3A-202ENST00000244303 IGHV3-66A0A0C4DH42 116 aa11.12□□□□□ -0.63
HIF3A-202ENST00000244303 LINC01548A6NM66 108 aa11.12□□□□□ -0.63
HIF3A-202ENST00000244303 G3V318 75 aa11.12□□□□□ -0.63
HIF3A-202ENST00000244303 BUB3O43684 328 aa11.12□□□□□ -0.63
HIF3A-202ENST00000244303 S100A7P31151 101 aa11.12□□□□□ -0.63
HIF3A-202ENST00000244303 FXYD7P58549 80 aa11.12□□□□□ -0.63
HIF3A-202ENST00000244303 LMO4P61968 165 aa11.12□□□□□ -0.63
HIF3A-202ENST00000244303 OR8A1Q8NGG7 326 aa11.12□□□□□ -0.63
HIF3A-202ENST00000244303 BPESC1Q9GZL8 116 aa11.12□□□□□ -0.63
HIF3A-202ENST00000244303 PEF1Q9UBV8 284 aaKnown RBP11.12□□□□□ -0.63
HIF3A-202ENST00000244303 ORM1P02763 201 aa11.11□□□□□ -0.63
HIF3A-202ENST00000244303 CLEC19AQ6UXS0 136 aa11.11□□□□□ -0.63
HIF3A-202ENST00000244303 CCDC140Q96MF4 163 aa11.11□□□□□ -0.63
HIF3A-202ENST00000244303 PPBPP02775 128 aa11.11□□□□□ -0.63
HIF3A-202ENST00000244303 COX8AP10176 69 aa11.11□□□□□ -0.63
HIF3A-202ENST00000244303 CKS2P33552 79 aa11.11□□□□□ -0.63
HIF3A-202ENST00000244303 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.11□□□□□ -0.63
HIF3A-202ENST00000244303 SMIM15Q7Z3B0 74 aa11.11□□□□□ -0.63
HIF3A-202ENST00000244303 VPS13CQ709C8 3753 aa11.11□□□□□ -0.63
HIF3A-202ENST00000244303 IGHV3OR16-13A0A075B7E8 117 aa11.1□□□□□ -0.63
HIF3A-202ENST00000244303 IGHV3-74A0A0B4J1X5 117 aa11.1□□□□□ -0.63
HIF3A-202ENST00000244303 GAGE12BA1L429 117 aa11.1□□□□□ -0.63
HIF3A-202ENST00000244303 CLPSL1A2RUU4 121 aa11.1□□□□□ -0.63
HIF3A-202ENST00000244303 GOSR1O95249 250 aa11.1□□□□□ -0.63
HIF3A-202ENST00000244303 NPYP01303 97 aa11.1□□□□□ -0.63
HIF3A-202ENST00000244303 MSRB1Q9NZV6 116 aa11.1□□□□□ -0.63
HIF3A-202ENST00000244303 ITPR1Q14643 2758 aa11.1□□□□□ -0.63
HIF3A-202ENST00000244303 AKAP6Q13023 2319 aa11.1□□□□□ -0.63
HIF3A-202ENST00000244303 C7orf71A4D174 169 aa11.1□□□□□ -0.63
HIF3A-202ENST00000244303 FABP5P3A8MUU1 101 aa11.1□□□□□ -0.63
HIF3A-202ENST00000244303 RAB9AP51151 201 aa11.1□□□□□ -0.63
HIF3A-202ENST00000244303 SRSF2Q01130 221 aaKnown RBP11.1□□□□□ -0.63
HIF3A-202ENST00000244303 KLK9Q2XQG4 91 aa11.1□□□□□ -0.63
HIF3A-202ENST00000244303 PIP4P2Q8N4L2 257 aa11.1□□□□□ -0.63
HIF3A-202ENST00000244303 AP1S3Q96PC3 154 aa11.1□□□□□ -0.63
HIF3A-202ENST00000244303 PSMG3-AS1Q96PY0 264 aa11.1□□□□□ -0.63
HIF3A-202ENST00000244303 KLK9Q9UKQ9 250 aa11.1□□□□□ -0.63
HIF3A-202ENST00000244303 TRAV8-6A0A0B4J262 113 aa11.09□□□□□ -0.63
HIF3A-202ENST00000244303 PAX8Q06710 450 aa11.09□□□□□ -0.63
HIF3A-202ENST00000244303 IL17RELQ6ZVW7 336 aa11.09□□□□□ -0.63
HIF3A-202ENST00000244303 CENPVL3A0A0U1RRI6 287 aa11.09□□□□□ -0.63
HIF3A-202ENST00000244303 HBDP02042 147 aa11.09□□□□□ -0.63
HIF3A-202ENST00000244303 IGHV3-49A0A0A0MS15 119 aa11.08□□□□□ -0.64
HIF3A-202ENST00000244303 TMEM97Q5BJF2 176 aa11.08□□□□□ -0.64
HIF3A-202ENST00000244303 RNF185Q96GF1 192 aa11.08□□□□□ -0.64
HIF3A-202ENST00000244303 SLC50A1Q9BRV3 221 aa11.08□□□□□ -0.64
HIF3A-202ENST00000244303 GAGE10A6NGK3 116 aa11.07□□□□□ -0.64
HIF3A-202ENST00000244303 K7ERU9 68 aa11.07□□□□□ -0.64
HIF3A-202ENST00000244303 NPFFO15130 113 aa11.07□□□□□ -0.64
HIF3A-202ENST00000244303 ZNF207O43670 478 aaKnown RBP11.07□□□□□ -0.64
HIF3A-202ENST00000244303 IGHV4-39P01824 125 aa11.07□□□□□ -0.64
HIF3A-202ENST00000244303 FOXE3Q13461 319 aa11.07□□□□□ -0.64
HIF3A-202ENST00000244303 PRSS57Q6UWY2 283 aa11.07□□□□□ -0.64
HIF3A-202ENST00000244303 C2orf91Q6ZV80 131 aa11.07□□□□□ -0.64
HIF3A-202ENST00000244303 EEF1AKMT3Q96AZ1 226 aa11.07□□□□□ -0.64
HIF3A-202ENST00000244303 CNFNQ9BYD5 112 aa11.07□□□□□ -0.64
HIF3A-202ENST00000244303 RBAKDNA6NC62 111 aa11.07□□□□□ -0.64
HIF3A-202ENST00000244303 PPIFP30405 207 aaKnown RBP11.07□□□□□ -0.64
HIF3A-202ENST00000244303 TCTAP57738 103 aa11.07□□□□□ -0.64
HIF3A-202ENST00000244303 CACNG7P62955 275 aa11.07□□□□□ -0.64
HIF3A-202ENST00000244303 SEC11AP67812 179 aa11.07□□□□□ -0.64
HIF3A-202ENST00000244303 LINC01559Q495D7 138 aa11.07□□□□□ -0.64
HIF3A-202ENST00000244303 CELSR1Q9NYQ6 3014 aa11.06□□□□□ -0.64
HIF3A-202ENST00000244303 GAS8-AS1O95177 125 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms