RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 Q6AWC8 147 aa9.83□□□□□ -0.84
SNAI1-201ENST00000244050 FAM19A2Q8N3H0 131 aa9.83□□□□□ -0.84
SNAI1-201ENST00000244050 C5orf56Q8N8D9 126 aa9.83□□□□□ -0.84
SNAI1-201ENST00000244050 BORCS7Q96B45 105 aa9.83□□□□□ -0.84
SNAI1-201ENST00000244050 VAMP8Q9BV40 100 aa9.83□□□□□ -0.84
SNAI1-201ENST00000244050 MOB4Q9Y3A3 225 aa9.83□□□□□ -0.84
SNAI1-201ENST00000244050 HIVEP2P31629 2446 aa9.82□□□□□ -0.84
SNAI1-201ENST00000244050 COL6A5A8TX70 2615 aa9.82□□□□□ -0.84
SNAI1-201ENST00000244050 A0A087X0K7 114 aa9.82□□□□□ -0.84
SNAI1-201ENST00000244050 LOC102724200A0A096LPH7 203 aaPredicted RBP9.82□□□□□ -0.84
SNAI1-201ENST00000244050 A0A1B0GUT8 65 aa9.82□□□□□ -0.84
SNAI1-201ENST00000244050 H3BUX3 64 aa9.82□□□□□ -0.84
SNAI1-201ENST00000244050 CHEK1O14757 476 aa9.82□□□□□ -0.84
SNAI1-201ENST00000244050 SMAD7O15105 426 aaKnown RBP9.82□□□□□ -0.84
SNAI1-201ENST00000244050 CLEC3BP05452 202 aa9.82□□□□□ -0.84
SNAI1-201ENST00000244050 C3orf79P0CE67 100 aa9.82□□□□□ -0.84
SNAI1-201ENST00000244050 CT45A10P0DMU9 189 aa9.82□□□□□ -0.84
SNAI1-201ENST00000244050 IGHV4-31P0DP07 118 aa9.82□□□□□ -0.84
SNAI1-201ENST00000244050 RIGQ13278 110 aa9.82□□□□□ -0.84
SNAI1-201ENST00000244050 SAPCD1Q5SSQ6 148 aa9.82□□□□□ -0.84
SNAI1-201ENST00000244050 PIFOQ8TCI5 191 aa9.82□□□□□ -0.84
SNAI1-201ENST00000244050 ATP6V0BQ99437 205 aa9.82□□□□□ -0.84
SNAI1-201ENST00000244050 ZFAND3Q9H8U3 227 aa9.82□□□□□ -0.84
SNAI1-201ENST00000244050 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.81□□□□□ -0.84
SNAI1-201ENST00000244050 ATRQ13535 2644 aa9.81□□□□□ -0.84
SNAI1-201ENST00000244050 TRBV7-1A0A0A6YYK4 115 aa9.81□□□□□ -0.84
SNAI1-201ENST00000244050 INAFM1C9JVW0 142 aa9.81□□□□□ -0.84
SNAI1-201ENST00000244050 NTF3P20783 257 aa9.81□□□□□ -0.84
SNAI1-201ENST00000244050 GPR183P32249 361 aa9.81□□□□□ -0.84
SNAI1-201ENST00000244050 CRIP2P52943 208 aaPredicted RBP9.81□□□□□ -0.84
SNAI1-201ENST00000244050 CYB5R2Q6BCY4 276 aa9.81□□□□□ -0.84
SNAI1-201ENST00000244050 CHCHD1Q96BP2 118 aaKnown RBP9.81□□□□□ -0.84
SNAI1-201ENST00000244050 C8orf49Q96NF6 230 aa9.81□□□□□ -0.84
SNAI1-201ENST00000244050 MIEN1Q9BRT3 115 aa9.81□□□□□ -0.84
SNAI1-201ENST00000244050 ZMAT5Q9UDW3 170 aaKnown RBP9.81□□□□□ -0.84
SNAI1-201ENST00000244050 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.8□□□□□ -0.84
SNAI1-201ENST00000244050 LINC01548A6NM66 108 aa9.8□□□□□ -0.84
SNAI1-201ENST00000244050 G3V318 75 aa9.8□□□□□ -0.84
SNAI1-201ENST00000244050 BUB3O43684 328 aa9.8□□□□□ -0.84
SNAI1-201ENST00000244050 IGHG4P01861 327 aa9.8□□□□□ -0.84
SNAI1-201ENST00000244050 LY6EQ16553 131 aa9.8□□□□□ -0.84
SNAI1-201ENST00000244050 RNASEKQ6P5S7 137 aaKnown RBP9.8□□□□□ -0.84
SNAI1-201ENST00000244050 MRPL52Q86TS9 123 aaKnown RBP9.8□□□□□ -0.84
SNAI1-201ENST00000244050 EEF1AKMT3Q96AZ1 226 aa9.8□□□□□ -0.84
SNAI1-201ENST00000244050 URB1-AS1Q96HZ7 61 aa9.8□□□□□ -0.84
SNAI1-201ENST00000244050 CCDC140Q96MF4 163 aa9.8□□□□□ -0.84
SNAI1-201ENST00000244050 FAM181BA6NEQ2 426 aa9.8□□□□□ -0.84
SNAI1-201ENST00000244050 M0R2Z0 102 aa9.8□□□□□ -0.84
SNAI1-201ENST00000244050 RAB4AP20338 218 aa9.8□□□□□ -0.84
SNAI1-201ENST00000244050 KRTAP1-1Q07627 177 aa9.8□□□□□ -0.84
SNAI1-201ENST00000244050 C19orf54Q5BKX5 351 aa9.8□□□□□ -0.84
SNAI1-201ENST00000244050 PRR25Q96S07 402 aa9.8□□□□□ -0.84
SNAI1-201ENST00000244050 PAM16Q9Y3D7 125 aa9.8□□□□□ -0.84
SNAI1-201ENST00000244050 CLPSL1A2RUU4 121 aa9.79□□□□□ -0.84
SNAI1-201ENST00000244050 ARMS2P0C7Q2 107 aa9.79□□□□□ -0.84
SNAI1-201ENST00000244050 CTRLP40313 264 aa9.79□□□□□ -0.84
SNAI1-201ENST00000244050 RELQ04864 619 aaPredicted RBP9.79□□□□□ -0.84
SNAI1-201ENST00000244050 ASCL2Q99929 193 aa9.79□□□□□ -0.84
SNAI1-201ENST00000244050 STAB1Q9NY15 2570 aa9.78□□□□□ -0.84
SNAI1-201ENST00000244050 IGKV2-40A0A087WW87 121 aaPredicted RBP9.78□□□□□ -0.84
SNAI1-201ENST00000244050 TMEM189A5PLL7 270 aa9.78□□□□□ -0.84
SNAI1-201ENST00000244050 SH2D1AO60880 128 aa9.78□□□□□ -0.84
SNAI1-201ENST00000244050 IGKV2D-40P01614 121 aaPredicted RBP9.78□□□□□ -0.84
SNAI1-201ENST00000244050 CLEC19AQ6UXS0 136 aa9.78□□□□□ -0.84
SNAI1-201ENST00000244050 ZNF493Q6ZR52 646 aa9.78□□□□□ -0.84
SNAI1-201ENST00000244050 IGHV3-35A0A0C4DH35 117 aa9.77□□□□□ -0.84
SNAI1-201ENST00000244050 RBAKDNA6NC62 111 aa9.77□□□□□ -0.84
SNAI1-201ENST00000244050 A6NDX4 124 aa9.77□□□□□ -0.84
SNAI1-201ENST00000244050 C2orf70A6NJV1 201 aa9.77□□□□□ -0.84
SNAI1-201ENST00000244050 FAM223BA6NKX1 122 aa9.77□□□□□ -0.84
SNAI1-201ENST00000244050 M0R143 59 aa9.77□□□□□ -0.84
SNAI1-201ENST00000244050 LINC00614P0C842 121 aa9.77□□□□□ -0.84
SNAI1-201ENST00000244050 BTF3P20290 206 aaKnown RBP9.77□□□□□ -0.84
SNAI1-201ENST00000244050 BMI1P35226 326 aa9.77□□□□□ -0.84
SNAI1-201ENST00000244050 RPS20P60866 119 aaKnown RBP9.77□□□□□ -0.84
SNAI1-201ENST00000244050 SRSF2Q01130 221 aaKnown RBP9.77□□□□□ -0.84
SNAI1-201ENST00000244050 ATP5G2Q06055 141 aa9.77□□□□□ -0.84
SNAI1-201ENST00000244050 PMCHL1Q16048 86 aa9.77□□□□□ -0.84
SNAI1-201ENST00000244050 LCN12Q6JVE5 192 aa9.77□□□□□ -0.84
SNAI1-201ENST00000244050 EBLN2Q6P2I7 272 aa9.77□□□□□ -0.84
SNAI1-201ENST00000244050 FAM223AQ8IWN6 122 aa9.77□□□□□ -0.84
SNAI1-201ENST00000244050 SLC50A1Q9BRV3 221 aa9.77□□□□□ -0.84
SNAI1-201ENST00000244050 SNHG12Q9BXW3 62 aa9.77□□□□□ -0.84
SNAI1-201ENST00000244050 SONP18583 2426 aaKnown RBP9.77□□□□□ -0.85
SNAI1-201ENST00000244050 TRAV41A0A0B4J266 112 aa9.77□□□□□ -0.85
SNAI1-201ENST00000244050 A0A1B0GV90 55 aa9.77□□□□□ -0.85
SNAI1-201ENST00000244050 M0QZK8 103 aa9.77□□□□□ -0.85
SNAI1-201ENST00000244050 BRI3O95415 125 aa9.77□□□□□ -0.85
SNAI1-201ENST00000244050 DEFB112Q30KQ8 113 aa9.77□□□□□ -0.85
SNAI1-201ENST00000244050 PRR31Q5SQ13 230 aa9.77□□□□□ -0.85
SNAI1-201ENST00000244050 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.77□□□□□ -0.85
SNAI1-201ENST00000244050 SPATA3Q8NHX4 192 aa9.77□□□□□ -0.85
SNAI1-201ENST00000244050 VGLL1Q99990 258 aa9.77□□□□□ -0.85
SNAI1-201ENST00000244050 U3KQE9 123 aa9.77□□□□□ -0.85
SNAI1-201ENST00000244050 MXRA5Q9NR99 2828 aa9.76□□□□□ -0.85
SNAI1-201ENST00000244050 IGHV3OR16-8A0A075B7F1 116 aa9.76□□□□□ -0.85
SNAI1-201ENST00000244050 EREGO14944 169 aa9.76□□□□□ -0.85
SNAI1-201ENST00000244050 PRB4P10163 310 aaPredicted RBP9.76□□□□□ -0.85
SNAI1-201ENST00000244050 ZNF705AQ6ZN79 300 aaPredicted RBP9.76□□□□□ -0.85
SNAI1-201ENST00000244050 METTL26Q96S19 204 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms