RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 FAM110DQ8TAY7 271 aaPredicted RBP12.63□□□□□ -0.39
LTBR-201ENST00000228918 IGHV3OR16-8A0A075B7F1 116 aa12.62□□□□□ -0.39
LTBR-201ENST00000228918 SRSF2Q01130 221 aaKnown RBP12.62□□□□□ -0.39
LTBR-201ENST00000228918 PAX8Q06710 450 aa12.62□□□□□ -0.39
LTBR-201ENST00000228918 ZNF575Q86XF7 245 aa12.62□□□□□ -0.39
LTBR-201ENST00000228918 OR8A1Q8NGG7 326 aa12.62□□□□□ -0.39
LTBR-201ENST00000228918 IGHV3-35A0A0C4DH35 117 aa12.62□□□□□ -0.39
LTBR-201ENST00000228918 GPR183P32249 361 aa12.62□□□□□ -0.39
LTBR-201ENST00000228918 PIP4P2Q8N4L2 257 aa12.62□□□□□ -0.39
LTBR-201ENST00000228918 ZNF502Q8TBZ5 544 aa12.62□□□□□ -0.39
LTBR-201ENST00000228918 PSMG3-AS1Q96PY0 264 aa12.62□□□□□ -0.39
LTBR-201ENST00000228918 PEF1Q9UBV8 284 aaKnown RBP12.62□□□□□ -0.39
LTBR-201ENST00000228918 TWIST1Q15672 202 aa12.61□□□□□ -0.39
LTBR-201ENST00000228918 C15orf32Q32M92 178 aa12.61□□□□□ -0.39
LTBR-201ENST00000228918 ZFAND3Q9H8U3 227 aa12.61□□□□□ -0.39
LTBR-201ENST00000228918 A0A087X0K7 114 aa12.6□□□□□ -0.39
LTBR-201ENST00000228918 NPYP01303 97 aa12.6□□□□□ -0.39
LTBR-201ENST00000228918 KLK9Q2XQG4 91 aa12.6□□□□□ -0.39
LTBR-201ENST00000228918 C2orf91Q6ZV80 131 aa12.6□□□□□ -0.39
LTBR-201ENST00000228918 MEGF9Q9H1U4 602 aa12.6□□□□□ -0.39
LTBR-201ENST00000228918 KLK9Q9UKQ9 250 aa12.6□□□□□ -0.39
LTBR-201ENST00000228918 SMKR1H3BMG3 65 aa12.6□□□□□ -0.39
LTBR-201ENST00000228918 HBDP02042 147 aa12.6□□□□□ -0.39
LTBR-201ENST00000228918 CKS2P33552 79 aa12.6□□□□□ -0.39
LTBR-201ENST00000228918 ECSCRQ19T08 205 aa12.6□□□□□ -0.39
LTBR-201ENST00000228918 LGALS9BQ3B8N2 356 aa12.6□□□□□ -0.39
LTBR-201ENST00000228918 LGALS9CQ6DKI2 356 aa12.6□□□□□ -0.39
LTBR-201ENST00000228918 DPF1Q92782 380 aa12.6□□□□□ -0.39
LTBR-201ENST00000228918 AJUBAQ96IF1 538 aa12.6□□□□□ -0.39
LTBR-201ENST00000228918 IGF2RP11717 2491 aa12.6□□□□□ -0.39
LTBR-201ENST00000228918 A0A1W2PPR1 153 aa12.59□□□□□ -0.39
LTBR-201ENST00000228918 CNFNQ9BYD5 112 aa12.59□□□□□ -0.39
LTBR-201ENST00000228918 ATP6V0E1O15342 81 aa12.59□□□□□ -0.39
LTBR-201ENST00000228918 BUB3O43684 328 aa12.59□□□□□ -0.39
LTBR-201ENST00000228918 NDUFS7O75251 213 aa12.59□□□□□ -0.39
LTBR-201ENST00000228918 UCNP55089 124 aa12.59□□□□□ -0.39
LTBR-201ENST00000228918 SPOCK3Q9BQ16 436 aa12.59□□□□□ -0.39
LTBR-201ENST00000228918 RAXQ9Y2V3 346 aa12.59□□□□□ -0.39
LTBR-201ENST00000228918 PRAC2D3DTV9 90 aa12.58□□□□□ -0.4
LTBR-201ENST00000228918 RAB9AP51151 201 aa12.58□□□□□ -0.4
LTBR-201ENST00000228918 FXYD7P58549 80 aa12.58□□□□□ -0.4
LTBR-201ENST00000228918 ATRXP46100 2492 aa12.58□□□□□ -0.4
LTBR-201ENST00000228918 CIDEAO60543 219 aa12.58□□□□□ -0.4
LTBR-201ENST00000228918 SAP30O75446 220 aa12.58□□□□□ -0.4
LTBR-201ENST00000228918 ORM1P02763 201 aa12.58□□□□□ -0.4
LTBR-201ENST00000228918 FGF6P10767 208 aa12.58□□□□□ -0.4
LTBR-201ENST00000228918 UBE2E1P51965 193 aa12.58□□□□□ -0.4
LTBR-201ENST00000228918 ERCC8Q13216 396 aa12.58□□□□□ -0.4
LTBR-201ENST00000228918 FOXE3Q13461 319 aa12.58□□□□□ -0.4
LTBR-201ENST00000228918 UFSP1Q6NVU6 142 aa12.58□□□□□ -0.4
LTBR-201ENST00000228918 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.58□□□□□ -0.4
LTBR-201ENST00000228918 RNF185Q96GF1 192 aa12.58□□□□□ -0.4
LTBR-201ENST00000228918 MED13LQ71F56 2210 aa12.57□□□□□ -0.4
LTBR-201ENST00000228918 FABP5P3A8MUU1 101 aa12.57□□□□□ -0.4
LTBR-201ENST00000228918 CLEC3BP05452 202 aa12.57□□□□□ -0.4
LTBR-201ENST00000228918 CACNG7P62955 275 aa12.57□□□□□ -0.4
LTBR-201ENST00000228918 LINC01559Q495D7 138 aa12.57□□□□□ -0.4
LTBR-201ENST00000228918 MSRB1Q9NZV6 116 aa12.57□□□□□ -0.4
LTBR-201ENST00000228918 CLPSL1A2RUU4 121 aa12.57□□□□□ -0.4
LTBR-201ENST00000228918 RBAKDNA6NC62 111 aa12.57□□□□□ -0.4
LTBR-201ENST00000228918 CCDC140Q96MF4 163 aa12.57□□□□□ -0.4
LTBR-201ENST00000228918 C7orf71A4D174 169 aa12.56□□□□□ -0.4
LTBR-201ENST00000228918 RNF182Q8N6D2 247 aa12.56□□□□□ -0.4
LTBR-201ENST00000228918 OR1N2Q8NGR9 330 aa12.56□□□□□ -0.4
LTBR-201ENST00000228918 SLC50A1Q9BRV3 221 aa12.56□□□□□ -0.4
LTBR-201ENST00000228918 NPFFR1Q9GZQ6 430 aa12.56□□□□□ -0.4
LTBR-201ENST00000228918 SNAI2O43623 268 aa12.55□□□□□ -0.4
LTBR-201ENST00000228918 GOSR1O95249 250 aa12.55□□□□□ -0.4
LTBR-201ENST00000228918 SAA4P35542 130 aa12.55□□□□□ -0.4
LTBR-201ENST00000228918 RIPPLY3P57055 190 aa12.55□□□□□ -0.4
LTBR-201ENST00000228918 PRSS57Q6UWY2 283 aa12.55□□□□□ -0.4
LTBR-201ENST00000228918 IL17RELQ6ZVW7 336 aa12.55□□□□□ -0.4
LTBR-201ENST00000228918 IFI27L1Q96BM0 104 aa12.55□□□□□ -0.4
LTBR-201ENST00000228918 GAGE10A6NGK3 116 aa12.55□□□□□ -0.4
LTBR-201ENST00000228918 G3V4G9 280 aa12.55□□□□□ -0.4
LTBR-201ENST00000228918 SEC11AP67812 179 aa12.55□□□□□ -0.4
LTBR-201ENST00000228918 MAP1LC3AQ9H492 121 aa12.54□□□□□ -0.4
LTBR-201ENST00000228918 IGHV3-66A0A0C4DH42 116 aa12.54□□□□□ -0.4
LTBR-201ENST00000228918 LINC01546A6NGU7 62 aa12.54□□□□□ -0.4
LTBR-201ENST00000228918 G3V318 75 aa12.54□□□□□ -0.4
LTBR-201ENST00000228918 CLEC19AQ6UXS0 136 aa12.54□□□□□ -0.4
LTBR-201ENST00000228918 SPTBN1Q01082 2364 aaKnown RBP12.53□□□□□ -0.4
LTBR-201ENST00000228918 GAS8-AS1O95177 125 aa12.53□□□□□ -0.4
LTBR-201ENST00000228918 BOD1L2Q8IYS8 172 aa12.53□□□□□ -0.4
LTBR-201ENST00000228918 CACNA1BQ00975 2339 aa12.53□□□□□ -0.4
LTBR-201ENST00000228918 SVEP1Q4LDE5 3571 aa12.53□□□□□ -0.4
LTBR-201ENST00000228918 LINC01548A6NM66 108 aa12.53□□□□□ -0.4
LTBR-201ENST00000228918 CLEC2AQ6UVW9 174 aa12.53□□□□□ -0.4
LTBR-201ENST00000228918 GTF2H5Q6ZYL4 71 aa12.53□□□□□ -0.4
LTBR-201ENST00000228918 TRAV8-2A0A0B4J237 113 aa12.52□□□□□ -0.41
LTBR-201ENST00000228918 CENPVL3A0A0U1RRI6 287 aa12.52□□□□□ -0.41
LTBR-201ENST00000228918 TMEM97Q5BJF2 176 aa12.52□□□□□ -0.41
LTBR-201ENST00000228918 EEF1AKMT3Q96AZ1 226 aa12.52□□□□□ -0.41
LTBR-201ENST00000228918 UBTD1Q9HAC8 227 aa12.52□□□□□ -0.41
LTBR-201ENST00000228918 COL6A6A6NMZ7 2263 aa12.52□□□□□ -0.41
LTBR-201ENST00000228918 IGHV3OR16-13A0A075B7E8 117 aa12.51□□□□□ -0.41
LTBR-201ENST00000228918 IGHV3-74A0A0B4J1X5 117 aa12.51□□□□□ -0.41
LTBR-201ENST00000228918 IGKV3D-20A0A0C4DH25 116 aa12.51□□□□□ -0.41
LTBR-201ENST00000228918 EFNA4P52798 201 aa12.51□□□□□ -0.41
LTBR-201ENST00000228918 AGPAT4-IT1Q9H0P7 198 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms