RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 TTC9CQ8N5M4 171 aa10.23□□□□□ -0.77
CTNS-201ENST00000046640 Q8N6K4 173 aa10.23□□□□□ -0.77
CTNS-201ENST00000046640 SMIM12Q96EX1 92 aa10.23□□□□□ -0.77
CTNS-201ENST00000046640 SOX21Q9Y651 276 aaPredicted RBP10.23□□□□□ -0.77
CTNS-201ENST00000046640 RHOGP84095 191 aa10.23□□□□□ -0.77
CTNS-201ENST00000046640 C15orf32Q32M92 178 aa10.23□□□□□ -0.77
CTNS-201ENST00000046640 LYZL1Q6UWQ5 148 aa10.23□□□□□ -0.77
CTNS-201ENST00000046640 Q8TAT8 98 aa10.23□□□□□ -0.77
CTNS-201ENST00000046640 IGSF10Q6WRI0 2623 aa10.23□□□□□ -0.77
CTNS-201ENST00000046640 NPIPB6E9PJ23 425 aa10.22□□□□□ -0.77
CTNS-201ENST00000046640 MRPS12O15235 138 aaKnown RBP10.22□□□□□ -0.77
CTNS-201ENST00000046640 ZNF207O43670 478 aaKnown RBP10.22□□□□□ -0.77
CTNS-201ENST00000046640 PET117Q6UWS5 81 aa10.22□□□□□ -0.77
CTNS-201ENST00000046640 SMIM15Q7Z3B0 74 aa10.22□□□□□ -0.77
CTNS-201ENST00000046640 POLQO75417 2590 aa10.22□□□□□ -0.77
CTNS-201ENST00000046640 CLEC3BP05452 202 aa10.22□□□□□ -0.77
CTNS-201ENST00000046640 AJUBAQ96IF1 538 aa10.22□□□□□ -0.77
CTNS-201ENST00000046640 THYN1Q9P016 225 aa10.22□□□□□ -0.77
CTNS-201ENST00000046640 CSPG4Q6UVK1 2322 aa10.22□□□□□ -0.77
CTNS-201ENST00000046640 C1orf122Q6ZSJ8 110 aa10.21□□□□□ -0.77
CTNS-201ENST00000046640 ZNF747Q9BV97 191 aa10.21□□□□□ -0.77
CTNS-201ENST00000046640 PRORYQ9H606 182 aa10.21□□□□□ -0.77
CTNS-201ENST00000046640 AAMDCQ9H7C9 122 aa10.21□□□□□ -0.77
CTNS-201ENST00000046640 C1RLQ9NZP8 487 aa10.21□□□□□ -0.77
CTNS-201ENST00000046640 TRAV8-6A0A0B4J262 113 aa10.21□□□□□ -0.78
CTNS-201ENST00000046640 K7EQM0 130 aa10.21□□□□□ -0.78
CTNS-201ENST00000046640 CT45A10P0DMU9 189 aa10.21□□□□□ -0.78
CTNS-201ENST00000046640 PSG9Q00887 426 aa10.21□□□□□ -0.78
CTNS-201ENST00000046640 PSG3Q16557 428 aa10.21□□□□□ -0.78
CTNS-201ENST00000046640 MINOS1Q5TGZ0 78 aa10.21□□□□□ -0.78
CTNS-201ENST00000046640 MINOS1-NBL1R4GNA1 71 aa10.21□□□□□ -0.78
CTNS-201ENST00000046640 ABCA2Q9BZC7 2435 aa10.21□□□□□ -0.78
CTNS-201ENST00000046640 OVOL3O00110 214 aa10.2□□□□□ -0.78
CTNS-201ENST00000046640 IGHV4-39P01824 125 aa10.2□□□□□ -0.78
CTNS-201ENST00000046640 UBE2E1P51965 193 aa10.2□□□□□ -0.78
CTNS-201ENST00000046640 PRSS57Q6UWY2 283 aa10.2□□□□□ -0.78
CTNS-201ENST00000046640 CLEC19AQ6UXS0 136 aa10.2□□□□□ -0.78
CTNS-201ENST00000046640 C12orf54Q6X4T0 127 aa10.2□□□□□ -0.78
CTNS-201ENST00000046640 OR10AG1Q8NH19 301 aa10.2□□□□□ -0.78
CTNS-201ENST00000046640 FAM208BQ5VWN6 2430 aa10.2□□□□□ -0.78
CTNS-201ENST00000046640 TMEM75Q8N9X5 138 aa10.2□□□□□ -0.78
CTNS-201ENST00000046640 C18orf15Q96N68 181 aa10.2□□□□□ -0.78
CTNS-201ENST00000046640 CSN1S1P47710 185 aa10.2□□□□□ -0.78
CTNS-201ENST00000046640 CACNG7P62955 275 aa10.2□□□□□ -0.78
CTNS-201ENST00000046640 TM4SF20Q53R12 229 aa10.2□□□□□ -0.78
CTNS-201ENST00000046640 DEFB125Q8N687 156 aa10.2□□□□□ -0.78
CTNS-201ENST00000046640 RAB37Q96AX2 223 aa10.2□□□□□ -0.78
CTNS-201ENST00000046640 SIGLEC8Q9NYZ4 499 aa10.2□□□□□ -0.78
CTNS-201ENST00000046640 TMEM189A5PLL7 270 aa10.19□□□□□ -0.78
CTNS-201ENST00000046640 RNF182Q8N6D2 247 aa10.19□□□□□ -0.78
CTNS-201ENST00000046640 PRELID3AQ96N28 172 aa10.19□□□□□ -0.78
CTNS-201ENST00000046640 SMAD5-AS1Q9Y6J3 95 aa10.19□□□□□ -0.78
CTNS-201ENST00000046640 USP9YO00507 2555 aaPredicted RBP10.19□□□□□ -0.78
CTNS-201ENST00000046640 CENPVL3A0A0U1RRI6 287 aa10.19□□□□□ -0.78
CTNS-201ENST00000046640 PPIFP30405 207 aaKnown RBP10.19□□□□□ -0.78
CTNS-201ENST00000046640 EBI3Q14213 229 aa10.19□□□□□ -0.78
CTNS-201ENST00000046640 TWIST1Q15672 202 aa10.19□□□□□ -0.78
CTNS-201ENST00000046640 LINC01545Q5VT33 79 aa10.19□□□□□ -0.78
CTNS-201ENST00000046640 VGLL1Q99990 258 aa10.19□□□□□ -0.78
CTNS-201ENST00000046640 RABAC1Q9UI14 185 aa10.19□□□□□ -0.78
CTNS-201ENST00000046640 FAM231BA6NCW3 169 aa10.18□□□□□ -0.78
CTNS-201ENST00000046640 NPFFO15130 113 aa10.18□□□□□ -0.78
CTNS-201ENST00000046640 SH2D1AO60880 128 aa10.18□□□□□ -0.78
CTNS-201ENST00000046640 C7orf71A4D174 169 aa10.18□□□□□ -0.78
CTNS-201ENST00000046640 NMUP48645 174 aa10.18□□□□□ -0.78
CTNS-201ENST00000046640 HIST1H1AQ02539 215 aaPredicted RBP10.18□□□□□ -0.78
CTNS-201ENST00000046640 C2orf91Q6ZV80 131 aa10.18□□□□□ -0.78
CTNS-201ENST00000046640 CSTL1Q9H114 145 aa10.18□□□□□ -0.78
CTNS-201ENST00000046640 A0A096LNJ9 63 aa10.17□□□□□ -0.78
CTNS-201ENST00000046640 OOSP1A8MZH6 123 aa10.17□□□□□ -0.78
CTNS-201ENST00000046640 ERCC8Q13216 396 aa10.17□□□□□ -0.78
CTNS-201ENST00000046640 LY6EQ16553 131 aa10.17□□□□□ -0.78
CTNS-201ENST00000046640 MSRB1Q9NZV6 116 aa10.17□□□□□ -0.78
CTNS-201ENST00000046640 TRAV40A0A0B4J280 105 aa10.17□□□□□ -0.78
CTNS-201ENST00000046640 IGHV4-61A0A0C4DH41 118 aa10.17□□□□□ -0.78
CTNS-201ENST00000046640 GAGE12BA1L429 117 aa10.17□□□□□ -0.78
CTNS-201ENST00000046640 COX8AP10176 69 aa10.17□□□□□ -0.78
CTNS-201ENST00000046640 NRGNQ92686 78 aa10.17□□□□□ -0.78
CTNS-201ENST00000046640 GAS8-AS1O95177 125 aa10.16□□□□□ -0.78
CTNS-201ENST00000046640 RPL7P18124 248 aaKnown RBP10.16□□□□□ -0.78
CTNS-201ENST00000046640 CKS2P33552 79 aa10.16□□□□□ -0.78
CTNS-201ENST00000046640 PRAC2D3DTV9 90 aa10.16□□□□□ -0.78
CTNS-201ENST00000046640 RPS20P60866 119 aaKnown RBP10.16□□□□□ -0.78
CTNS-201ENST00000046640 MRPL51Q4U2R6 128 aaKnown RBP10.16□□□□□ -0.78
CTNS-201ENST00000046640 TMEM97Q5BJF2 176 aa10.16□□□□□ -0.78
CTNS-201ENST00000046640 MS4A6AQ9H2W1 248 aa10.16□□□□□ -0.78
CTNS-201ENST00000046640 ORM1P02763 201 aa10.16□□□□□ -0.78
CTNS-201ENST00000046640 EVI2AP22794 236 aa10.16□□□□□ -0.78
CTNS-201ENST00000046640 ZNF80P51504 273 aaPredicted RBP10.16□□□□□ -0.78
CTNS-201ENST00000046640 LYPD1Q8N2G4 141 aa10.16□□□□□ -0.78
CTNS-201ENST00000046640 NPYP01303 97 aa10.15□□□□□ -0.78
CTNS-201ENST00000046640 C16orf54Q6UWD8 224 aa10.15□□□□□ -0.78
CTNS-201ENST00000046640 ZNF502Q8TBZ5 544 aa10.15□□□□□ -0.78
CTNS-201ENST00000046640 CCDC140Q96MF4 163 aa10.15□□□□□ -0.78
CTNS-201ENST00000046640 TTTY13Q9BZ97 58 aa10.15□□□□□ -0.78
CTNS-201ENST00000046640 CD5LO43866 347 aa10.15□□□□□ -0.79
CTNS-201ENST00000046640 SAP30O75446 220 aa10.15□□□□□ -0.79
CTNS-201ENST00000046640 RIPPLY3P57055 190 aa10.15□□□□□ -0.79
CTNS-201ENST00000046640 FAM104BQ5XKR9 115 aa10.15□□□□□ -0.79
CTNS-201ENST00000046640 PCP2Q8IVA1 136 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms