RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Ttc28Q80XJ3 2450 aa12.84□□□□□ -0.35
Upf1-202ENSMUST00000215817 Olfr1362Q5SZZ8 308 aa12.84□□□□□ -0.35
Upf1-202ENSMUST00000215817 FlnbQ80X90 2602 aaKnown RBP12.84□□□□□ -0.35
Upf1-202ENSMUST00000215817 Arhgap21Q6DFV3 1944 aa12.84□□□□□ -0.35
Upf1-202ENSMUST00000215817 Ighv1-37A0A0A6YW32 117 aa12.84□□□□□ -0.35
Upf1-202ENSMUST00000215817 Gm27021M0QWE2 156 aa12.84□□□□□ -0.35
Upf1-202ENSMUST00000215817 P04219 140 aa12.84□□□□□ -0.35
Upf1-202ENSMUST00000215817 Gm10384Q3UQ87 92 aa12.84□□□□□ -0.35
Upf1-202ENSMUST00000215817 Spcs3Q6ZWQ7 180 aa12.84□□□□□ -0.35
Upf1-202ENSMUST00000215817 Prss45Q8K4I7 317 aa12.84□□□□□ -0.35
Upf1-202ENSMUST00000215817 Olfr362Q8VGV7 317 aa12.84□□□□□ -0.35
Upf1-202ENSMUST00000215817 Tmprss2Q9JIQ8 490 aa12.84□□□□□ -0.35
Upf1-202ENSMUST00000215817 Hif1anQ8BLR9 349 aa12.84□□□□□ -0.35
Upf1-202ENSMUST00000215817 Lyrm7Q9DA03 104 aa12.84□□□□□ -0.35
Upf1-202ENSMUST00000215817 Hspb9Q9DAM3 168 aa12.84□□□□□ -0.35
Upf1-202ENSMUST00000215817 Fbxw4Q9JMJ2 410 aa12.84□□□□□ -0.35
Upf1-202ENSMUST00000215817 StrapQ9Z1Z2 350 aaKnown RBP12.84□□□□□ -0.35
Upf1-202ENSMUST00000215817 Igkv5-37A0A140T8N4 115 aa12.83□□□□□ -0.35
Upf1-202ENSMUST00000215817 Ccl2P10148 148 aa12.83□□□□□ -0.35
Upf1-202ENSMUST00000215817 Hist1h1eP43274 219 aaKnown RBP12.83□□□□□ -0.35
Upf1-202ENSMUST00000215817 Mettl4Q3U034 471 aa12.83□□□□□ -0.35
Upf1-202ENSMUST00000215817 Lyplal1Q3UFF7 239 aa12.83□□□□□ -0.35
Upf1-202ENSMUST00000215817 Vkorc1l1Q6TEK5 176 aa12.83□□□□□ -0.35
Upf1-202ENSMUST00000215817 Srrm4Q8BKA3 608 aa12.83□□□□□ -0.35
Upf1-202ENSMUST00000215817 Lpar6Q8BMC0 344 aa12.83□□□□□ -0.35
Upf1-202ENSMUST00000215817 Mbnl2Q8C181 373 aaKnown RBP12.83□□□□□ -0.35
Upf1-202ENSMUST00000215817 Nfam1Q8R4V1 264 aa12.83□□□□□ -0.35
Upf1-202ENSMUST00000215817 Olfr802Q8VGJ2 312 aa12.83□□□□□ -0.35
Upf1-202ENSMUST00000215817 Tmem70Q921N7 253 aa12.83□□□□□ -0.35
Upf1-202ENSMUST00000215817 Col13a1Q9R1N9 751 aa12.83□□□□□ -0.35
Upf1-202ENSMUST00000215817 Plp2Q9R1Q7 152 aa12.83□□□□□ -0.35
Upf1-202ENSMUST00000215817 Platr25A0A1Y7VIZ1 466 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 Trav12-1A0N8R1 115 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 MyadmO35682 320 aaKnown RBP12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 KhkP97328 298 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 MyocosQ3UWS6 143 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 Urm1Q9D2P4 101 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 Igkv4-50A0A0B4J1J0 117 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 Gm5890A0A140LI04 305 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 Gm765B2RVL9 189 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 Ccdc71lE9Q4T4 218 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 Gm21244J3QK38 227 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 Gm10881P01642 115 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 Olfr1168Q7TR25 312 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 Degs2Q8R2F2 323 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 GgactQ923B0 149 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 Sft2d3Q9CSV6 209 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 Pcnx2Q5DU28 2122 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 Ighv5-2A0A0A6YVX8 117 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 Olfr1337A2ACY8 315 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 Foxa2P35583 459 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 Pax9P47242 342 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 Tnfsf15Q5UBV8 252 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 OpalinQ7M750 143 aa12.83□□□□□ -0.36
Upf1-202ENSMUST00000215817 Slc25a4P48962 298 aaKnown RBP12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 Defa-rs7P50715 91 aa12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 Trav8d-1Q5R1H8 112 aa12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 Cstl1Q80Y72 140 aa12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 Ms4a8Q99N10 290 aa12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 SelenofQ9ERR7 162 aa12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 Olfr154Q9QY00 318 aa12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 Olfr869E9PX82 323 aa12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 Gm10775Q3V290 127 aa12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 Fam78bQ8BQN5 261 aa12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 DapQ91XC8 102 aa12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 Rcl1Q9JJT0 373 aaKnown RBP12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 Rspo1Q9Z132 265 aa12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 Gm4565A0A140LJ87 301 aa12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 Gm6176J3QK59 301 aa12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 Gm4567Q3UTA8 301 aa12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 Taar5Q5QD14 337 aa12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 Aadacl4Q8BM81 407 aa12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 Stpg2Q8C8J0 561 aa12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 Tlcd2Q8VC26 310 aa12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 Rnase6Q9D244 153 aa12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 Q9DAA3 117 aa12.82□□□□□ -0.36
Upf1-202ENSMUST00000215817 Hoxa1P09022 331 aa12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 FusP56959 518 aaKnown RBP12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 Ms4a13Q5FWC3 203 aa12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 Zfp420Q7TMN8 578 aa12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 Olfr480Q8VEZ0 312 aa12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 Olfr1445Q8VFW9 314 aa12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 Psmb2Q9R1P3 201 aa12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 Gm15440D3Z3P4 90 aa12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 Vmn1r114L7N226 321 aa12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 Vmn1r126L7N2C8 321 aa12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 Il11P47873 199 aa12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 Ifna13Q80SU4 189 aa12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 Atp6v1fQ9D1K2 119 aa12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 Adam6aB2RSY5 754 aa12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 Cd209gD3Z5D4 194 aa12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 Olfr1209Q3SXJ3 310 aa12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 Znf250Q7TNU6 535 aa12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 Rpp21Q8R040 150 aa12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 IdnkQ8R0J8 184 aa12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 Olfr1350Q8VF34 308 aa12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 PpifQ99KR7 206 aaKnown RBP12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 Tex36Q9D5N9 219 aa12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 PkdrejQ9Z0T6 2126 aa12.81□□□□□ -0.36
Upf1-202ENSMUST00000215817 Zfp386Q1WWJ5 626 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms