RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Mcm3apQ9WUU9 1971 aa13.72□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 Gm19345G3UYD9 124 aa13.72□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 Il9P15247 144 aa13.72□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 Pate2Q3UW31 111 aa13.72□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 Vgll1Q99NC0 307 aa13.72□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 Klri1B2KG20 248 aa13.72□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 Igsf23B2RTN2 239 aa13.72□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 BsxQ810B3 232 aa13.72□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 Wipi1Q8R3E3 446 aa13.72□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 Arl14eplQ3UKZ7 152 aa13.71□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 Htr1dQ61224 374 aa13.71□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 Ifna11Q61716 190 aa13.71□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 Q6DIA7 600 aa13.71□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 Q8CDS7 251 aa13.71□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 D830044I16RikA0A1D5RM53 117 aa13.71□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 Mfge8P21956 463 aaKnown RBP13.71□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 PpoxP51175 477 aa13.71□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 Zfp954Q7TNU5 416 aa13.71□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 Vmn1r46Q9EQ45 309 aa13.71□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 SriQ6P069 198 aa13.71□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 Olfr275Q7TS18 319 aa13.71□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 Degs2Q8R2F2 323 aa13.71□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 Rbmxl2Q9DAE2 385 aaKnown RBP13.71□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 Tmem183Q9JJB9 375 aa13.71□□□□□ -0.21
Pcdh1-203ENSMUST00000160721 Cep250Q60952 2414 aa13.71□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Olfr1116E9PXB8 307 aa13.71□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Olfr94Q6UAH0 386 aa13.71□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 PaxxQ8K0Y7 205 aa13.71□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Cd226Q8K4F0 333 aa13.71□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Ntn3Q9R1A3 580 aa13.71□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Loxhd1C8YR32 2068 aa13.71□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Ighv6-4A0A0A6YX19 119 aa13.7□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 P01667 111 aa13.7□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 P01822 137 aa13.7□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Defa-rs7P50715 91 aa13.7□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Hhipl1Q14DK5 791 aa13.7□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 D130052B06RikQ3UW13 202 aa13.7□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Olfr874Q7TRE6 310 aa13.7□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Chrdl2Q8VEA6 426 aa13.7□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Tmem139E9PX92 214 aa13.7□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Khdc1aQ3UWR2 166 aa13.7□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Olfr873Q8VFJ0 319 aa13.7□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Cisd1Q91WS0 108 aaKnown RBP13.7□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Gm20532G3UXR8 106 aa13.7□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Olfr92L7N475 312 aa13.7□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 P18530 117 aa13.7□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Gpr87Q99MT7 358 aa13.7□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Ndufa2Q9CQ75 99 aa13.7□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Shank1D3YZU1 2167 aa13.7□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Colca2F8VPY8 239 aa13.7□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Olfr1228Q8VGM9 323 aa13.7□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 H2-M5A7VMS3 348 aa13.69□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 MscO88940 201 aa13.69□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Chchd1Q9CQA6 118 aa13.69□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Gm9772F6XPD8 135 aa13.69□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Tmem106bQ80X71 275 aa13.69□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Bpifb3Q80ZU7 473 aa13.69□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Rps11P62281 158 aaKnown RBP13.69□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Zfp936Q3ULA8 456 aa13.69□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Gm14443A2ARX0 610 aa13.69□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Olfr556E9Q549 324 aa13.69□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Smim13E9Q942 88 aa13.69□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Crispld2Q8BZQ2 495 aa13.69□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Prr30Q9D9B7 401 aa13.69□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Zfp976E9Q981 636 aa13.69□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Klf2Q60843 354 aaKnown RBP13.69□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Olfr148Q60887 310 aa13.69□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 TskuQ8CBR6 354 aa13.69□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Zfp959Q91VM8 539 aa13.69□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Acsm5Q8BGA8 578 aa13.68□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Ercc8Q8CFD5 397 aa13.68□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Gm39566A0A1B0GT45 1251 aa13.68□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 P18532 116 aa13.68□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Cd81P35762 236 aa13.68□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Olfr1173Q7TR24 312 aa13.68□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Plppr1Q8BFZ2 325 aa13.68□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Olfr1339Q8VGB1 315 aa13.68□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Sfxn3Q91V61 321 aa13.68□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Lipt2Q9D009 231 aa13.68□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Ctag2Q9D9S4 219 aa13.68□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Olfr961Q9EQ84 314 aa13.68□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Ralgapa2A3KGS3 1872 aa13.68□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Gm6812B1AXU1 112 aa13.68□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 1700020N15RikL7MTX3 112 aa13.68□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 AdoQ6PDY2 256 aa13.68□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Lrtm1Q8BXQ3 356 aa13.68□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Sptan1P16546 2472 aaKnown RBP13.68□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Defa-rs12P50716 91 aa13.68□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Treml4Q3LRV9 263 aa13.68□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Dppa1Q810Y7 116 aa13.68□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Ighv14-3A0A075B5R9 117 aa13.67□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Gm5150Q1AN92 299 aa13.67□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Foxr2Q3UM89 302 aa13.67□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 MiaQ61865 130 aa13.67□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Hide1Q75VT8 222 aa13.67□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Olfr399Q7TRX3 311 aa13.67□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Myo16Q5DU14 1919 aa13.67□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 H60bB1B212 251 aa13.67□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Repin1Q5U4E2 545 aa13.67□□□□□ -0.22
Pcdh1-203ENSMUST00000160721 Tmem54Q9D7S1 219 aa13.67□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 52.4 ms