RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Ttc3O88196 1979 aaKnown RBP11.98□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Ighv14-2A0A075B5R7 117 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Gm20773A0A0A6YXW2 232 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Gm20807A0A0A6YXX7 232 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Gm9772F6XPD8 135 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Gm20873J3QMQ9 232 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Gm20795J3QP49 232 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 A630076J17RikJ3QQ32 107 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 LfngO09010 378 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 MdkP12025 140 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Gm21440Q3TTD8 232 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Trdv2-2Q5R1A4 116 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 PnkdQ69ZP3 385 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Tmem160Q9D938 188 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Cryba2Q9JJV1 197 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Ighv7-4A0A0A6YXL5 121 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Trbv15A0A0A6YYE3 115 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 AponG3X9D6 251 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 DdtO35215 118 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Atp6v0cP63082 155 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Spock3Q8BKV0 436 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Spsb4Q8R5B6 273 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Olfr1012Q8VFJ7 311 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Cela1Q91X79 266 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Sft2d3Q9CSV6 209 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 V1ra8Q9EQ48 279 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Egr4Q9WUF2 478 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Gm42543A0A0G2JET4 117 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 TymsP07607 307 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 RprmlQ3URD2 117 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Vkorc1l1Q6TEK5 176 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Duxbl2Q7TNE6 350 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Olfr875Q7TRE5 310 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Prss35Q8C0F9 409 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Bpifa5Q9CQX3 270 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 CcsQ9WU84 274 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Gm16442D3YZG3 307 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Irf2bp2E9Q1P8 570 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 P01667 111 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Tmem95P0DJF3 176 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Pef1Q8BFY6 275 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Gon4lQ9DB00 2260 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 BC053393A0A0B4J1F6 192 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 C2cd4dP0CG09 341 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Trav3-3Q5R1C3 114 aa11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Klf2Q60843 354 aaKnown RBP11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Dnajb12Q9QYI4 376 aaKnown RBP11.97□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Gm6970F7DCP6 221 aa11.96□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Olfr968Q8VFN4 314 aa11.96□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Kntc1Q8C3Y4 2207 aa11.96□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Scgb1b11A0A087WQJ0 93 aa11.96□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Gm10073E9Q3T0 114 aa11.96□□□□□ -0.49
Col3a1-201ENSMUST00000087883 NrepQ07475 68 aa11.96□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Prss57Q14B24 284 aa11.96□□□□□ -0.49
Col3a1-201ENSMUST00000087883 SnrpcQ62241 159 aa11.96□□□□□ -0.49
Col3a1-201ENSMUST00000087883 RetnlgQ8K426 117 aa11.96□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Mbnl3Q8R003 342 aaKnown RBP11.96□□□□□ -0.49
Col3a1-201ENSMUST00000087883 Csn3P06796 181 aa11.96□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Gm4788E9Q8B5 879 aa11.96□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Foxa3P35584 353 aa11.96□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Defa-rs10Q64263 91 aa11.96□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Rnf182Q8C432 247 aa11.96□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Q9DAS2 200 aa11.96□□□□□ -0.5
Col3a1-201ENSMUST00000087883 SergefQ80YD6 464 aa11.95□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Rnase2O35291 155 aa11.95□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Ankrd55Q8BLD6 626 aa11.95□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Tlcd2Q8VC26 310 aa11.95□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Smim8Q9CQQ0 97 aa11.95□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Myoz1Q9JK37 296 aa11.95□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Tmem196V9GX04 182 aa11.95□□□□□ -0.5
Col3a1-201ENSMUST00000087883 A930017K11RikE0CXQ2 571 aa11.95□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Olfr877Q8VF62 311 aa11.95□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Srp19Q9D7A6 144 aa11.95□□□□□ -0.5
Col3a1-201ENSMUST00000087883 MscO88940 201 aa11.95□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Derl1Q99J56 251 aa11.95□□□□□ -0.5
Col3a1-201ENSMUST00000087883 SktA2AQ25 1946 aaKnown RBP11.95□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Gm21719J3KMI9 230 aa11.95□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Sox21Q811W0 276 aa11.95□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Plppr1Q8BFZ2 325 aa11.95□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Scn8aQ9WTU3 1978 aa11.94□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Vmn1r232A2RTT5 351 aa11.94□□□□□ -0.5
Col3a1-201ENSMUST00000087883 SftpcP21841 193 aa11.94□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Itgbl1Q8VDV0 494 aa11.94□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Olfr476Q8VGI4 310 aa11.94□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Gm10665K7N6B7 321 aa11.94□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Ifitm5O88728 134 aa11.94□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Hoxa5P09021 270 aa11.94□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Eif4ebp2P70445 120 aa11.94□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Q0VG49 157 aa11.94□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Olfr593Q8VF28 327 aa11.94□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Hmga2P52927 108 aa11.94□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Lax1Q8BHB3 407 aa11.94□□□□□ -0.5
Col3a1-201ENSMUST00000087883 AtraidQ6PGD0 223 aa11.94□□□□□ -0.5
Col3a1-201ENSMUST00000087883 St6galnac6Q9JM95 333 aa11.94□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Olfr1192-ps1A0A1L1SRD7 309 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Ankrd66J3QNN4 192 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Gm21900J3QP38 180 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Rnase2bO35292 155 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Fam3dP97805 223 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Trav15-1-dv6-1Q5R1D2 117 aa11.93□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 128.7 ms