RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Olfr761Q7TRJ0 323 aa14.34□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 C1saQ8CG14 688 aa14.34□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gm21394Q497R7 227 aa14.34□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gatad1Q920S3 266 aa14.34□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gm21913J3KML9 361 aa14.34□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gm21776J3QPJ5 361 aa14.34□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Lrp10Q7TQH7 713 aa14.34□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Rpp25Q91WE3 199 aa14.34□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gm10130F6ZHM5 101 aa14.33□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gpm6bP35803 328 aa14.33□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Prss48Q14B25 312 aa14.33□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Asb5Q9D1A4 329 aa14.33□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Trbv15A0A0A6YYE3 115 aa14.33□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 BC030500E9Q6W0 185 aa14.33□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 MrgprgQ91ZB5 289 aa14.33□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Tmem131O70472 1877 aa14.33□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Trav6n-7A0A075B6A6 116 aa14.33□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 RflnbQ5SVD0 216 aa14.33□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Olfr25Q7TRD6 313 aa14.33□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Rab29Q91YQ1 204 aa14.33□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Igf2rQ07113 2483 aaKnown RBP14.33□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Scgb1b11A0A087WQJ0 93 aa14.33□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 A630076J17RikJ3QQ32 107 aa14.33□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Klhdc1Q80YG3 406 aa14.33□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Pcgf1Q8R023 259 aaKnown RBP14.33□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Tac4Q99N14 128 aa14.33□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Igkv6-20A0A140T8P2 115 aa14.33□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Gm10073E9Q3T0 114 aa14.33□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Defa7P50705 93 aa14.33□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 TifabQ8JZM6 147 aa14.33□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 RhovQ8VDU1 236 aa14.33□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Olfr470Q8VF65 314 aa14.33□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Uqcrfs1Q9CR68 274 aa14.33□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Atxn7l1Q9CZ05 146 aa14.33□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Spink14B9EJP9 96 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Cxcl1P12850 96 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Gsx1P31315 261 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Lrfn4Q80XU8 636 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Srxn1Q9D975 136 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Wnt5bP22726 359 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Reep5Q60870 185 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Lims1Q99JW4 325 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Ceacam1P31809 521 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Akirin1Q99LF1 191 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Gpr35Q9ES90 307 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Gm6525A0A0A6YW33 106 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Tex38A2A8T7 201 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 P01759 136 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Ca15Q99N23 324 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Rabac1Q9Z0S9 185 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 PtprfA2A8L5 1898 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Trav3n-3A0A0G2JEM0 114 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Vmn1r232A2RTT5 351 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 A6H6Q4 206 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Poc1aQ8JZX3 405 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Spsb4Q8R5B6 273 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Gm5225J3QPL3 108 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Dll3O88516 592 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 MosP00536 390 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Defa23Q5G866 93 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Ighv4-1A0A075B5R5 116 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Gm6594J3QM43 95 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Sumo3Q9Z172 110 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Igf2P09535 180 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Vkorc1l1Q6TEK5 176 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Q8CDS7 251 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Avpi1Q9D7H4 142 aa14.32□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Gm39566A0A1B0GT45 1251 aa14.31□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Q3UNZ8 350 aa14.31□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Znf250Q7TNU6 535 aa14.31□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Plxna3P70208 1872 aa14.31□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Gm21775J3KMK6 180 aa14.31□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 UmodQ91X17 642 aa14.31□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Prb1Q91X93 504 aa14.31□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Rasl10bQ5SSG5 203 aa14.31□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Igfbp7Q61581 281 aa14.31□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 AsipQ03288 131 aa14.31□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Ramp3Q9WUP1 147 aa14.31□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Gm609E9Q573 300 aa14.31□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 PnkdQ69ZP3 385 aa14.31□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Ubtd1Q91WB7 227 aa14.31□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Phf7Q9DAG9 307 aa14.31□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Rps2-ps6A0A140T8L5 221 aa14.31□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Olfr275Q7TS18 319 aa14.31□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Nabp2Q8R2Y9 212 aa14.31□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 TroQ6DIC6 2087 aa14.31□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Trav6n-5A0A075B621 112 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Trav6-5A0A075B6B5 112 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Prss32E9Q409 334 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Tcrg-C2A0A075B5Z2 167 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 P01661 131 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 P01662 111 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 P01663 111 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 P01853 167 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Rln3Q8CHK2 141 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Olfr593Q8VF28 327 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Fmc1Q9CR13 113 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Ighv5-12A0A075B5Q4 117 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 D330020A13RikQ8C799 211 aa14.3□□□□□ -0.12
Ccdc88a-201ENSMUST00000040182 Ifitm2Q99J93 144 aa14.3□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 39.3 ms