RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 LtaP09225 202 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Fa2hQ5MPP0 372 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Ctf1Q60753 203 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Ifna12Q80SS5 189 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Ell3Q80VR2 395 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Nabp2Q8R2Y9 212 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Olfr1256Q8VGP1 306 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Tmem88Q9D0N8 159 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Arid1bE9Q4N7 2244 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Rnase2bO35292 155 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Tnfrsf17O88472 185 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Cd79bP15530 228 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Tmem70Q921N7 253 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Mien1Q9CQ86 115 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Prr23a3Q9CWP9 254 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 ChodlQ9CXM0 273 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Slc25a10Q9QZD8 287 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Gm17727E9Q4V7 109 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Igf2P09535 180 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Psmb6Q60692 238 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Cbln4Q8BME9 198 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Nup35Q8R4R6 325 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Olfr816Q8VFU2 312 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Tceal8Q9CZY2 117 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Atp6v1fQ9D1K2 119 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Trem3Q9JKE1 183 aa10.09□□□□□ -0.79
Ctr9-201ENSMUST00000005749 Zfp292Q9Z2U2 2698 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 NrgnP60761 78 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Spcs3Q6ZWQ7 180 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Cd200r5Q8BTP3 270 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Anapc10Q8K2H6 185 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 SmagpQ99KC7 97 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Fbp1Q9QXD6 338 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Ighv9-2A0A0B4J1J4 117 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Gm42420A0A0J9YUQ2 99 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Olfr747E9PXH6 313 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Vmn1r194J3JS27 296 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Fam3dP97805 223 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Rspo3Q2TJ95 277 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Rab11fip5Q8R361 645 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 D1Ertd622eQ8VEB3 207 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 PpifQ99KR7 206 aaKnown RBP10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Q9D7E4 109 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Gm15140A2BEE3 237 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Gm14408E9Q6B9 136 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Gm9602J3QPD5 205 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 IfngP01580 155 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 MiaQ61865 130 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Dirc2Q8BFQ6 478 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 CrhQ8CIT0 187 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Q9DAF8 208 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Herpud1Q9JJK5 391 aa10.08□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Ighv1-37A0A0A6YW32 117 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Wnt5bP22726 359 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 H2afb1Q9CQ70 111 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Wdr31Q9JHB4 367 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Ighv14-4A0A0A6YVR1 117 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Igkv4-50A0A0B4J1J0 117 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Gm10073E9Q3T0 114 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Mmp9P41245 730 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Olfr1209Q3SXJ3 310 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Fam220aQ3ZN08 260 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Obox7Q4KL20 218 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Olfr411Q7TRW8 315 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Olfr877Q8VF62 311 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Ccdc198Q9CPZ1 294 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Opn3Q9WUK7 400 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Bcl2l10Q9Z0F3 191 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Npc2Q9Z0J0 149 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Nav3Q80TN7 2359 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Pcnx3Q8VI59 2028 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Notch4P31695 1964 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 MylkQ6PDN3 1941 aaKnown RBP10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Lnp1A0A1B0GSK3 178 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 G530012D18RikJ3QK25 139 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Dkk1O54908 272 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Olfr143P34985 313 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Efnb1P52795 345 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Mrps10Q80ZK0 160 aaKnown RBP10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 B3gnt9Q8VI16 399 aa10.07□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Unc79Q0KK59 2596 aa10.06□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Gm6993A0A1W2P738 69 aa10.06□□□□□ -0.8
Ctr9-201ENSMUST00000005749 H2-M5A7VMS3 348 aa10.06□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Olfr978E9Q985 311 aa10.06□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Cox6a1P43024 111 aa10.06□□□□□ -0.8
Ctr9-201ENSMUST00000005749 1700009N14RikQ14AA6 216 aaKnown RBP10.06□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Pilrb2Q2YFS1 225 aa10.06□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Rtl4Q3URY0 304 aa10.06□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Olfr958Q8VEY3 312 aa10.06□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Mgst1Q91VS7 155 aa10.06□□□□□ -0.8
Ctr9-201ENSMUST00000005749 TecrQ9CY27 308 aa10.06□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Lysmd2Q9D7V2 215 aa10.06□□□□□ -0.8
Ctr9-201ENSMUST00000005749 PigpQ9JHG1 132 aa10.06□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Cldn10Q9Z0S6 231 aa10.06□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Igkv14-100A0A0G2JG36 117 aa10.06□□□□□ -0.8
Ctr9-201ENSMUST00000005749 A0A286YCQ8 80 aa10.06□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Sc5dO88822 299 aa10.06□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Nhlh2Q64221 135 aa10.06□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Olfr480Q8VEZ0 312 aa10.06□□□□□ -0.8
Ctr9-201ENSMUST00000005749 Sft2d3Q9CSV6 209 aa10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms