RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Loxl4Q924C6 757 aa10.74□□□□□ -0.69
Msh6-201ENSMUST00000005503 Spaca3Q9D9X8 221 aa10.74□□□□□ -0.69
Msh6-201ENSMUST00000005503 Greb1Q3UHK3 1954 aa10.74□□□□□ -0.69
Msh6-201ENSMUST00000005503 Igkv14-126A0A075B5K0 117 aa10.74□□□□□ -0.69
Msh6-201ENSMUST00000005503 Igkv6-32A0A140T8N9 115 aa10.74□□□□□ -0.69
Msh6-201ENSMUST00000005503 Prss32E9Q409 334 aa10.74□□□□□ -0.69
Msh6-201ENSMUST00000005503 Taar4Q5QD15 347 aa10.74□□□□□ -0.69
Msh6-201ENSMUST00000005503 Prdx2Q61171 198 aaKnown RBP10.74□□□□□ -0.69
Msh6-201ENSMUST00000005503 Tmem167bQ80X45 74 aa10.74□□□□□ -0.69
Msh6-201ENSMUST00000005503 Piezo2Q8CD54 2822 aa10.74□□□□□ -0.69
Msh6-201ENSMUST00000005503 Pcnx3Q8VI59 2028 aa10.74□□□□□ -0.69
Msh6-201ENSMUST00000005503 Gm28171A0A087WQ19 227 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Vmn1r149E9PWL6 307 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Vmn1r101E9Q365 307 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Vmn1r158G3UY92 307 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 FasP25446 327 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Foxa2P35583 459 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Arrdc5Q497K5 325 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Olfr399Q7TRX3 311 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Zfp729bQ80VN4 1045 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Olfr926Q9EQ98 308 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Trav8n-2A0A075B633 112 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Gm20219A0A1B0GRQ3 87 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Ccdc71lE9Q4T4 218 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Gm10130F6ZHM5 101 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Gfra3O35118 397 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Gm10881P01642 115 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Lax1Q8BHB3 407 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 FibinQ9CQS3 217 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 PkdrejQ9Z0T6 2126 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Fam208bQ5DTT3 2382 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Trbv12-1A0A0B4J1H0 124 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Olfr898L7N1Z5 316 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Znf474Q6V5K9 347 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Hif1anQ8BLR9 349 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Olfr1183Q8VFF8 303 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Herpud1Q9JJK5 391 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Zfp407G3UVV3 2246 aa10.73□□□□□ -0.69
Msh6-201ENSMUST00000005503 Nkx2-8O70584 235 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Gcm1P70348 436 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Pafah1b2Q61206 229 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 MiaQ61865 130 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Olfr153Q7TR48 307 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Ptrh2Q8R2Y8 181 aaKnown RBP10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Gar1Q9CY66 231 aaKnown RBP10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Pmaip1Q9JM54 103 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Kif26aQ52KG5 1881 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Gm14124A2AU83 715 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 H60bB1B212 251 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Otx1P80205 355 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Slc37a1Q8R070 531 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Olfr513Q8VFZ3 309 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Mrpl13Q9D1P0 178 aaKnown RBP10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 1700031F05RikB1AX30 191 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Tmem139E9PX92 214 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Defa6P50704 93 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 SriQ6P069 198 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Prss37Q9DAA4 237 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Gm20773A0A0A6YXW2 232 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Gm20807A0A0A6YXX7 232 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Gm20873J3QMQ9 232 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Gm20795J3QP49 232 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Igh-3P01867 404 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Hoxa1P09022 331 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Gm21440Q3TTD8 232 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Tas2r114Q7M722 309 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Olfr924Q7TRB8 308 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Q8C3M9 231 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Olfr223Q8VF69 319 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Olfr1272Q8VGN8 308 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Vmn1r54Q9EPB8 315 aa10.72□□□□□ -0.69
Msh6-201ENSMUST00000005503 Lama3Q61789 3330 aa10.71□□□□□ -0.69
Msh6-201ENSMUST00000005503 Ighv1-67A0A0G2JFN9 117 aa10.71□□□□□ -0.69
Msh6-201ENSMUST00000005503 Trav13n-4A0A0G2JG01 110 aa10.71□□□□□ -0.69
Msh6-201ENSMUST00000005503 Gm765B2RVL9 189 aa10.71□□□□□ -0.69
Msh6-201ENSMUST00000005503 Ifitm7G3X9Z2 141 aa10.71□□□□□ -0.69
Msh6-201ENSMUST00000005503 P01634 136 aa10.71□□□□□ -0.69
Msh6-201ENSMUST00000005503 Iglc3P01845 104 aa10.71□□□□□ -0.69
Msh6-201ENSMUST00000005503 Bmpr1bP36898 502 aa10.71□□□□□ -0.69
Msh6-201ENSMUST00000005503 Bcl2l2P70345 193 aa10.71□□□□□ -0.69
Msh6-201ENSMUST00000005503 H2-DMb2Q31099 261 aa10.71□□□□□ -0.69
Msh6-201ENSMUST00000005503 Spcs3Q6ZWQ7 180 aa10.71□□□□□ -0.69
Msh6-201ENSMUST00000005503 Klf17Q8CFA7 341 aa10.71□□□□□ -0.69
Msh6-201ENSMUST00000005503 Ube2l6Q9QZU9 153 aa10.71□□□□□ -0.69
Msh6-201ENSMUST00000005503 Ighv1-47A0A0A6YY41 117 aa10.71□□□□□ -0.69
Msh6-201ENSMUST00000005503 Vmn1r224E9PWK2 298 aa10.71□□□□□ -0.69
Msh6-201ENSMUST00000005503 Alox12bO70582 701 aa10.71□□□□□ -0.69
Msh6-201ENSMUST00000005503 Rab7aP51150 207 aaKnown RBP10.71□□□□□ -0.69
Msh6-201ENSMUST00000005503 C1ql4Q4ZJM9 238 aa10.71□□□□□ -0.69
Msh6-201ENSMUST00000005503 Tctn2Q2MV57 700 aa10.71□□□□□ -0.7
Msh6-201ENSMUST00000005503 Zfp936Q3ULA8 456 aa10.71□□□□□ -0.7
Msh6-201ENSMUST00000005503 Olfr1362Q5SZZ8 308 aa10.71□□□□□ -0.7
Msh6-201ENSMUST00000005503 Tff3Q62395 81 aa10.71□□□□□ -0.7
Msh6-201ENSMUST00000005503 Mrps18cQ8R2L5 143 aaKnown RBP10.71□□□□□ -0.7
Msh6-201ENSMUST00000005503 Gtf3aQ8VHT7 364 aa10.71□□□□□ -0.7
Msh6-201ENSMUST00000005503 Lurap1Q9D6I9 239 aa10.71□□□□□ -0.7
Msh6-201ENSMUST00000005503 TslpQ9JIE6 140 aa10.71□□□□□ -0.7
Msh6-201ENSMUST00000005503 Mmp17Q9R0S3 578 aa10.71□□□□□ -0.7
Msh6-201ENSMUST00000005503 Gm14214V9GX35 225 aa10.71□□□□□ -0.7
Msh6-201ENSMUST00000005503 Olfr1118A0A0J9YUE7 307 aa10.7□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 96.9 ms