RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 UBE2E2Q96LR5 201 aa14.87□□□□□ -0.03
SCARB2-213ENST00000638680 DKK1O94907 266 aa14.87□□□□□ -0.03
SCARB2-213ENST00000638680 C2orf66Q6UXQ4 117 aa14.87□□□□□ -0.03
SCARB2-213ENST00000638680 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.87□□□□□ -0.03
SCARB2-213ENST00000638680 IGHG3P01860 377 aa14.87□□□□□ -0.03
SCARB2-213ENST00000638680 RPL35AP18077 110 aaKnown RBP14.87□□□□□ -0.03
SCARB2-213ENST00000638680 ZSWIM8A7E2V4 1837 aa14.87□□□□□ -0.03
SCARB2-213ENST00000638680 COX8AP10176 69 aa14.87□□□□□ -0.03
SCARB2-213ENST00000638680 TCF15Q12870 199 aa14.87□□□□□ -0.03
SCARB2-213ENST00000638680 TRPT1Q86TN4 253 aaKnown RBP14.87□□□□□ -0.03
SCARB2-213ENST00000638680 HAPLN4Q86UW8 402 aa14.86□□□□□ -0.03
SCARB2-213ENST00000638680 ZNF524Q96C55 264 aa14.86□□□□□ -0.03
SCARB2-213ENST00000638680 PLXNA3P51805 1871 aa14.86□□□□□ -0.03
SCARB2-213ENST00000638680 TRAV26-2A0A0B4J265 109 aa14.86□□□□□ -0.03
SCARB2-213ENST00000638680 LTBP1Q14766 1721 aa14.86□□□□□ -0.03
SCARB2-213ENST00000638680 OVOL3O00110 214 aa14.86□□□□□ -0.03
SCARB2-213ENST00000638680 INSP01308 110 aa14.86□□□□□ -0.03
SCARB2-213ENST00000638680 H3BMM0 161 aa14.86□□□□□ -0.03
SCARB2-213ENST00000638680 FAM231DQ6ZW35 169 aa14.86□□□□□ -0.03
SCARB2-213ENST00000638680 UBE2WQ96B02 151 aa14.86□□□□□ -0.03
SCARB2-213ENST00000638680 K7EP34 96 aa14.85□□□□□ -0.03
SCARB2-213ENST00000638680 WDR86Q86TI4 376 aa14.85□□□□□ -0.03
SCARB2-213ENST00000638680 DAZ1Q9NQZ3 744 aaKnown RBP14.85□□□□□ -0.03
SCARB2-213ENST00000638680 ZNF833PQ6ZTB9 187 aa14.85□□□□□ -0.03
SCARB2-213ENST00000638680 PHF3Q92576 2039 aaKnown RBP14.85□□□□□ -0.03
SCARB2-213ENST00000638680 SAA4P35542 130 aa14.84□□□□□ -0.03
SCARB2-213ENST00000638680 CMC4P56277 68 aaPredicted RBP14.84□□□□□ -0.03
SCARB2-213ENST00000638680 K7EP13 123 aa14.84□□□□□ -0.03
SCARB2-213ENST00000638680 NDUFB8O95169 186 aa14.84□□□□□ -0.03
SCARB2-213ENST00000638680 BVES-AS1Q5T3Y7 98 aa14.84□□□□□ -0.03
SCARB2-213ENST00000638680 NEGR1Q7Z3B1 354 aa14.84□□□□□ -0.03
SCARB2-213ENST00000638680 TMEM141Q96I45 108 aa14.84□□□□□ -0.03
SCARB2-213ENST00000638680 VWC2LB2RUY7 222 aa14.83□□□□□ -0.03
SCARB2-213ENST00000638680 ETV2O00321 342 aaPredicted RBP14.83□□□□□ -0.03
SCARB2-213ENST00000638680 C17orf58Q2M2W7 97 aa14.83□□□□□ -0.03
SCARB2-213ENST00000638680 GAGE1Q13065 139 aa14.83□□□□□ -0.04
SCARB2-213ENST00000638680 DUX4L9Q6RFH8 374 aaPredicted RBP14.83□□□□□ -0.04
SCARB2-213ENST00000638680 DTX1Q86Y01 620 aa14.83□□□□□ -0.04
SCARB2-213ENST00000638680 SIGLEC8Q9NYZ4 499 aa14.83□□□□□ -0.04
SCARB2-213ENST00000638680 LGALS9BQ3B8N2 356 aa14.83□□□□□ -0.04
SCARB2-213ENST00000638680 LGALS9CQ6DKI2 356 aa14.83□□□□□ -0.04
SCARB2-213ENST00000638680 E7EQL1 145 aa14.83□□□□□ -0.04
SCARB2-213ENST00000638680 WIPF3A6NGB9 483 aa14.82□□□□□ -0.04
SCARB2-213ENST00000638680 ATP6V0E1O15342 81 aa14.82□□□□□ -0.04
SCARB2-213ENST00000638680 DSCR9P59020 149 aa14.82□□□□□ -0.04
SCARB2-213ENST00000638680 ETDBQ3ZM63 59 aa14.82□□□□□ -0.04
SCARB2-213ENST00000638680 Q6ZR03 302 aa14.82□□□□□ -0.04
SCARB2-213ENST00000638680 MSRB2Q9Y3D2 182 aa14.82□□□□□ -0.04
SCARB2-213ENST00000638680 KNCNA6PVL3 124 aa14.82□□□□□ -0.04
SCARB2-213ENST00000638680 DNAJC30Q96LL9 226 aa14.82□□□□□ -0.04
SCARB2-213ENST00000638680 F8W1H4 67 aa14.82□□□□□ -0.04
SCARB2-213ENST00000638680 PMVKQ15126 192 aa14.82□□□□□ -0.04
SCARB2-213ENST00000638680 VWC2Q2TAL6 325 aa14.82□□□□□ -0.04
SCARB2-213ENST00000638680 CDPF1Q6NVV7 123 aa14.82□□□□□ -0.04
SCARB2-213ENST00000638680 B4DSR2 109 aa14.81□□□□□ -0.04
SCARB2-213ENST00000638680 MYLKQ15746 1914 aa14.81□□□□□ -0.04
SCARB2-213ENST00000638680 TRBV20-1A0A075B6N2 111 aa14.81□□□□□ -0.04
SCARB2-213ENST00000638680 KIAA2026Q5HYC2 2103 aa14.81□□□□□ -0.04
SCARB2-213ENST00000638680 FAM110DQ8TAY7 271 aaPredicted RBP14.81□□□□□ -0.04
SCARB2-213ENST00000638680 VWA8A3KMH1 1905 aa14.81□□□□□ -0.04
SCARB2-213ENST00000638680 ZNF503-AS2A6NEH8 195 aa14.81□□□□□ -0.04
SCARB2-213ENST00000638680 A0A1W2PPM0 123 aa14.81□□□□□ -0.04
SCARB2-213ENST00000638680 PPDPFLQ8WWR9 84 aa14.81□□□□□ -0.04
SCARB2-213ENST00000638680 INS-IGF2F8WCM5 200 aa14.8□□□□□ -0.04
SCARB2-213ENST00000638680 SYNJ2BPP57105 145 aa14.8□□□□□ -0.04
SCARB2-213ENST00000638680 C9orf153Q5TBE3 101 aa14.8□□□□□ -0.04
SCARB2-213ENST00000638680 TRPM7Q96QT4 1865 aa14.8□□□□□ -0.04
SCARB2-213ENST00000638680 K7EN84 100 aa14.8□□□□□ -0.04
SCARB2-213ENST00000638680 PRR25Q96S07 402 aa14.8□□□□□ -0.04
SCARB2-213ENST00000638680 CEND1Q8N111 149 aa14.8□□□□□ -0.04
SCARB2-213ENST00000638680 ZC2HC1AQ96GY0 325 aa14.8□□□□□ -0.04
SCARB2-213ENST00000638680 K7ERJ3 54 aa14.79□□□□□ -0.04
SCARB2-213ENST00000638680 KLK9Q9UKQ9 250 aa14.79□□□□□ -0.04
SCARB2-213ENST00000638680 THADAQ6YHU6 1953 aa14.79□□□□□ -0.04
SCARB2-213ENST00000638680 H3BRN7 92 aa14.79□□□□□ -0.04
SCARB2-213ENST00000638680 MMP23AO75900 390 aa14.79□□□□□ -0.04
SCARB2-213ENST00000638680 NPYP01303 97 aa14.79□□□□□ -0.04
SCARB2-213ENST00000638680 RUSC1-AS1Q66K80 236 aa14.79□□□□□ -0.04
SCARB2-213ENST00000638680 KLHL30-AS1Q8NEE0 82 aa14.79□□□□□ -0.04
SCARB2-213ENST00000638680 PROK2Q9HC23 129 aa14.79□□□□□ -0.04
SCARB2-213ENST00000638680 WT1-ASQ06250 92 aa14.79□□□□□ -0.04
SCARB2-213ENST00000638680 BPESC1Q9GZL8 116 aa14.79□□□□□ -0.04
SCARB2-213ENST00000638680 TPSG1Q9NRR2 321 aa14.79□□□□□ -0.04
SCARB2-213ENST00000638680 MRPL35Q9NZE8 188 aaKnown RBP14.79□□□□□ -0.04
SCARB2-213ENST00000638680 DEFB131AP59861 70 aa14.79□□□□□ -0.04
SCARB2-213ENST00000638680 RSPO1Q2MKA7 263 aaPredicted RBP14.79□□□□□ -0.04
SCARB2-213ENST00000638680 I3L3M4 83 aa14.78□□□□□ -0.04
SCARB2-213ENST00000638680 SS18Q15532 418 aa14.78□□□□□ -0.04
SCARB2-213ENST00000638680 C11orf52Q96A22 123 aa14.78□□□□□ -0.04
SCARB2-213ENST00000638680 C15orf65H3BRN8 121 aa14.78□□□□□ -0.04
SCARB2-213ENST00000638680 TMEM14CQ9P0S9 112 aa14.78□□□□□ -0.04
SCARB2-213ENST00000638680 COL4A6Q14031 1691 aa14.78□□□□□ -0.04
SCARB2-213ENST00000638680 ZNF134P52741 427 aa14.78□□□□□ -0.04
SCARB2-213ENST00000638680 Q8TCH9 128 aa14.78□□□□□ -0.04
SCARB2-213ENST00000638680 FXYD5Q96DB9 178 aa14.78□□□□□ -0.04
SCARB2-213ENST00000638680 FER1L5A0AVI2 2057 aa14.77□□□□□ -0.04
SCARB2-213ENST00000638680 IL15RAQ13261 267 aa14.77□□□□□ -0.04
SCARB2-213ENST00000638680 CACNA1EQ15878 2313 aa14.77□□□□□ -0.04
SCARB2-213ENST00000638680 SPINK13Q1W4C9 94 aa14.77□□□□□ -0.04
SCARB2-213ENST00000638680 C8orf86Q6ZUL3 223 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms