RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 KIR2DL5BA0A0G2JPC4 375 aa14.34□□□□□ -0.11
CLN8-211ENST00000636934 TMEM189A5PLL7 270 aa14.34□□□□□ -0.11
CLN8-211ENST00000636934 IGF1P05019 195 aa14.34□□□□□ -0.11
CLN8-211ENST00000636934 IGHV4-38-2P0DP08 117 aa14.34□□□□□ -0.11
CLN8-211ENST00000636934 BMI1P35226 326 aa14.34□□□□□ -0.11
CLN8-211ENST00000636934 CRIP1P50238 77 aa14.34□□□□□ -0.11
CLN8-211ENST00000636934 KIR2DL5AQ8N109 375 aa14.34□□□□□ -0.11
CLN8-211ENST00000636934 C8orf49Q96NF6 230 aa14.34□□□□□ -0.11
CLN8-211ENST00000636934 PRR25Q96S07 402 aa14.34□□□□□ -0.11
CLN8-211ENST00000636934 MED13LQ71F56 2210 aa14.34□□□□□ -0.11
CLN8-211ENST00000636934 IGKV2-40A0A087WW87 121 aaPredicted RBP14.33□□□□□ -0.12
CLN8-211ENST00000636934 IGKV2D-40P01614 121 aaPredicted RBP14.33□□□□□ -0.12
CLN8-211ENST00000636934 SLC25A16P16260 332 aa14.33□□□□□ -0.12
CLN8-211ENST00000636934 RAB4AP20338 218 aa14.33□□□□□ -0.12
CLN8-211ENST00000636934 LCN12Q6JVE5 192 aa14.33□□□□□ -0.12
CLN8-211ENST00000636934 RBAKDNA6NC62 111 aa14.32□□□□□ -0.12
CLN8-211ENST00000636934 A6NDX4 124 aa14.32□□□□□ -0.12
CLN8-211ENST00000636934 SH2D1AO60880 128 aa14.32□□□□□ -0.12
CLN8-211ENST00000636934 TRGV3P03979 118 aa14.32□□□□□ -0.12
CLN8-211ENST00000636934 NTF3P20783 257 aa14.32□□□□□ -0.12
CLN8-211ENST00000636934 RNASEKQ6P5S7 137 aaKnown RBP14.32□□□□□ -0.12
CLN8-211ENST00000636934 CHCHD1Q96BP2 118 aaKnown RBP14.32□□□□□ -0.12
CLN8-211ENST00000636934 CLPSL1A2RUU4 121 aa14.32□□□□□ -0.12
CLN8-211ENST00000636934 SRSF2Q01130 221 aaKnown RBP14.32□□□□□ -0.12
CLN8-211ENST00000636934 NIT1Q86X76 327 aa14.32□□□□□ -0.12
CLN8-211ENST00000636934 MRPL53Q96EL3 112 aaKnown RBP14.32□□□□□ -0.12
CLN8-211ENST00000636934 VAMP8Q9BV40 100 aa14.32□□□□□ -0.12
CLN8-211ENST00000636934 CLEC5AQ9NY25 188 aa14.32□□□□□ -0.12
CLN8-211ENST00000636934 IGHV3OR16-8A0A075B7F1 116 aa14.31□□□□□ -0.12
CLN8-211ENST00000636934 M0R2Z0 102 aa14.31□□□□□ -0.12
CLN8-211ENST00000636934 IGHG2P01859 326 aa14.31□□□□□ -0.12
CLN8-211ENST00000636934 CD33P20138 364 aa14.31□□□□□ -0.12
CLN8-211ENST00000636934 LBHQ53QV2 105 aaPredicted RBP14.31□□□□□ -0.12
CLN8-211ENST00000636934 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.31□□□□□ -0.12
CLN8-211ENST00000636934 Q71RC1 249 aaPredicted RBP14.31□□□□□ -0.12
CLN8-211ENST00000636934 USMG5Q96IX5 58 aa14.31□□□□□ -0.12
CLN8-211ENST00000636934 C20orf144Q9BQM9 153 aa14.31□□□□□ -0.12
CLN8-211ENST00000636934 U3KQE9 123 aa14.31□□□□□ -0.12
CLN8-211ENST00000636934 AKAP6Q13023 2319 aa14.3□□□□□ -0.12
CLN8-211ENST00000636934 H3BUX3 64 aa14.3□□□□□ -0.12
CLN8-211ENST00000636934 ARMS2P0C7Q2 107 aa14.3□□□□□ -0.12
CLN8-211ENST00000636934 FAM19A2Q8N3H0 131 aa14.3□□□□□ -0.12
CLN8-211ENST00000636934 ASCL2Q99929 193 aa14.3□□□□□ -0.12
CLN8-211ENST00000636934 ABCA2Q9BZC7 2435 aa14.3□□□□□ -0.12
CLN8-211ENST00000636934 ACACBO00763 2458 aa14.3□□□□□ -0.12
CLN8-211ENST00000636934 IGHG4P01861 327 aa14.29□□□□□ -0.12
CLN8-211ENST00000636934 HIF1ANQ9NWT6 349 aa14.29□□□□□ -0.12
CLN8-211ENST00000636934 DOPEY1Q5JWR5 2465 aa14.29□□□□□ -0.12
CLN8-211ENST00000636934 LY6EQ16553 131 aa14.29□□□□□ -0.12
CLN8-211ENST00000636934 VGLL1Q99990 258 aa14.29□□□□□ -0.12
CLN8-211ENST00000636934 C3orf79P0CE67 100 aa14.28□□□□□ -0.12
CLN8-211ENST00000636934 RNF224P0DH78 156 aa14.28□□□□□ -0.12
CLN8-211ENST00000636934 ARL3P36405 182 aa14.28□□□□□ -0.12
CLN8-211ENST00000636934 COX6B1P14854 86 aa14.27□□□□□ -0.12
CLN8-211ENST00000636934 ZNF493Q6ZR52 646 aa14.27□□□□□ -0.12
CLN8-211ENST00000636934 LURAP1LQ8IV03 231 aa14.27□□□□□ -0.12
CLN8-211ENST00000636934 FAM181BA6NEQ2 426 aa14.27□□□□□ -0.13
CLN8-211ENST00000636934 NDUFA4O00483 81 aa14.27□□□□□ -0.13
CLN8-211ENST00000636934 HLA-DMBP28068 263 aa14.27□□□□□ -0.13
CLN8-211ENST00000636934 IGFL4Q6B9Z1 124 aa14.27□□□□□ -0.13
CLN8-211ENST00000636934 Q8N976 141 aa14.27□□□□□ -0.13
CLN8-211ENST00000636934 TPPP3Q9BW30 176 aa14.27□□□□□ -0.13
CLN8-211ENST00000636934 LINC00527Q9UJ94 153 aa14.27□□□□□ -0.13
CLN8-211ENST00000636934 RNF114Q9Y508 228 aa14.27□□□□□ -0.13
CLN8-211ENST00000636934 FABP5P3A8MUU1 101 aa14.26□□□□□ -0.13
CLN8-211ENST00000636934 PMCHL1Q16048 86 aa14.26□□□□□ -0.13
CLN8-211ENST00000636934 LYZL1Q6UWQ5 148 aa14.26□□□□□ -0.13
CLN8-211ENST00000636934 LINC01356Q8N9X3 169 aa14.26□□□□□ -0.13
CLN8-211ENST00000636934 Q8TAT8 98 aa14.26□□□□□ -0.13
CLN8-211ENST00000636934 BAHCC1Q9P281 2608 aa14.25□□□□□ -0.13
CLN8-211ENST00000636934 IGHV3-66A0A0C4DH42 116 aa14.25□□□□□ -0.13
CLN8-211ENST00000636934 J3QLI3 93 aa14.25□□□□□ -0.13
CLN8-211ENST00000636934 LINC00614P0C842 121 aa14.25□□□□□ -0.13
CLN8-211ENST00000636934 PRB4P10163 310 aaPredicted RBP14.25□□□□□ -0.13
CLN8-211ENST00000636934 PPIFP30405 207 aaKnown RBP14.25□□□□□ -0.13
CLN8-211ENST00000636934 ZNF580Q9UK33 172 aa14.25□□□□□ -0.13
CLN8-211ENST00000636934 CFAP46Q8IYW2 2715 aa14.25□□□□□ -0.13
CLN8-211ENST00000636934 A0A0G2JLM5 398 aa14.24□□□□□ -0.13
CLN8-211ENST00000636934 OR5AL1P0C617 328 aa14.24□□□□□ -0.13
CLN8-211ENST00000636934 BTF3P20290 206 aaKnown RBP14.24□□□□□ -0.13
CLN8-211ENST00000636934 C8orf86Q6ZUL3 223 aa14.24□□□□□ -0.13
CLN8-211ENST00000636934 IGSF10Q6WRI0 2623 aa14.24□□□□□ -0.13
CLN8-211ENST00000636934 TMSB15BA0A087X1C1 80 aa14.24□□□□□ -0.13
CLN8-211ENST00000636934 ZNF207O43670 478 aaKnown RBP14.24□□□□□ -0.13
CLN8-211ENST00000636934 CTRLP40313 264 aa14.24□□□□□ -0.13
CLN8-211ENST00000636934 TMEM78Q5T7P6 136 aa14.24□□□□□ -0.13
CLN8-211ENST00000636934 FER1L6-AS1Q8NA97 138 aa14.24□□□□□ -0.13
CLN8-211ENST00000636934 URB1-AS1Q96HZ7 61 aa14.24□□□□□ -0.13
CLN8-211ENST00000636934 MIEN1Q9BRT3 115 aa14.24□□□□□ -0.13
CLN8-211ENST00000636934 PAM16Q9Y3D7 125 aa14.24□□□□□ -0.13
CLN8-211ENST00000636934 C9orf139Q6ZV77 190 aa14.23□□□□□ -0.13
CLN8-211ENST00000636934 MRPL52Q86TS9 123 aaKnown RBP14.23□□□□□ -0.13
CLN8-211ENST00000636934 TRAV8-2A0A0B4J237 113 aa14.22□□□□□ -0.13
CLN8-211ENST00000636934 PRAC2D3DTV9 90 aa14.22□□□□□ -0.13
CLN8-211ENST00000636934 HIST1H1AQ02539 215 aaPredicted RBP14.22□□□□□ -0.13
CLN8-211ENST00000636934 RNF182Q8N6D2 247 aa14.22□□□□□ -0.13
CLN8-211ENST00000636934 GLMPQ8WWB7 406 aa14.22□□□□□ -0.13
CLN8-211ENST00000636934 IGHV3OR16-13A0A075B7E8 117 aa14.22□□□□□ -0.13
CLN8-211ENST00000636934 IGHV3-74A0A0B4J1X5 117 aa14.22□□□□□ -0.13
CLN8-211ENST00000636934 ORM1P02763 201 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms