RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 CDK10Q15131 360 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 MSMO1Q15800 293 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 DEFB135Q30KP9 77 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 DEFB116Q30KQ4 102 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 ZFP1Q6P2D0 407 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 TMEM91Q6ZNR0 172 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 IDO2Q6ZQW0 420 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 NTM-AS1Q6ZSK4 140 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 H1FOOQ8IZA3 346 aaPredicted RBP1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 OR5T1Q8NG75 326 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 COQ8AQ8NI60 647 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 TMEM167AQ8TBQ9 72 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 LGALS14Q8TCE9 139 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 NEK7Q8TDX7 302 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 MRPL48Q96GC5 212 aaKnown RBP1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 ARHGAP5-AS1Q96IT6 56 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 OR10C1Q96KK4 312 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 Q96MT0 163 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 C9orf16Q9BUW7 83 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 TMED9Q9BVK6 235 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 HINT2Q9BX68 163 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 PECRQ9BY49 303 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 OR2D2Q9H210 308 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 VCX3AQ9NNX9 186 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 SLC2A9Q9NRM0 540 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 CKLFQ9UBR5 152 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 ERGIC3Q9Y282 383 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 RBMX2Q9Y388 322 aaKnown RBP1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 KLF12Q9Y4X4 402 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 UBR4Q5T4S7 5183 aa1.54□□□□□ -2.16
SMARCB1-208ENST00000634926 IRGMA1A4Y4 181 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 RAB19A4D1S5 217 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 HSBP1L1C9JCN9 74 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 K7EIM0 57 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 BPY2O14599 106 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 PSPHP1O15172 72 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 FABP7O15540 132 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 RBFOX2O43251 390 aaKnown RBP eCLIP1.53□□□□□ -2.168e-8■■■■■ 34.6
SMARCB1-208ENST00000634926 GGCTO75223 188 aaKnown RBP1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 SLC22A5O76082 557 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 CNIH1O95406 144 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 CRYZL1O95825 349 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 HLA-DQB1P01920 261 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 APCSP02743 223 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 OR5AL1P0C617 328 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 APELAP0DMC3 54 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 HIST1H1DP16402 221 aaKnown RBP1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 MYL12AP19105 171 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 WT1-ASQ06250 92 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 TPBGQ13641 420 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 PLGLAQ15195 96 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 RBMY1FQ15415 496 aaKnown RBP1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 SSX1Q16384 188 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 PSG3Q16557 428 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 TAL2Q16559 108 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 RTL8BQ17RB0 113 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 ACSM3Q53FZ2 586 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 SMUG1Q53HV7 270 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 GLT8D1Q68CQ7 371 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 ZNF773Q6PK81 442 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 SLC16A13Q7RTY0 426 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 PACRGLQ8N7B6 248 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 ZNF645Q8N7E2 425 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 GDPD1Q8N9F7 314 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 Q8N9L7 120 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 ZFAND1Q8TCF1 268 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 ADTRPQ96IZ2 230 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 SPIN2AQ99865 258 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 SPIN2BQ9BPZ2 258 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 TMEM243Q9BU79 118 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 ARV1Q9H2C2 271 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 TUBA4BQ9H853 241 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 DAZ1Q9NQZ3 744 aaKnown RBP1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 COA4Q9NYJ1 87 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 BET1LQ9NYM9 111 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 ABRACLQ9P1F3 81 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 APLNQ9ULZ1 77 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 ANAPC10Q9UM13 185 aa1.53□□□□□ -2.16
SMARCB1-208ENST00000634926 TRBV7-1A0A0A6YYK4 115 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 TRAV2A0A0B4J234 112 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 TRAV1-2A0A0B4J238 106 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 PNMA8CA0A1B0GUJ8 204 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 LINC00854A0A1B0GVQ3 168 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 IFITM5A6NNB3 132 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 NDUFA4O00483 81 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 BET1O15155 118 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 TGOLN2O43493 480 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 ZNF207O43670 478 aaKnown RBP1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 CREBL2O60519 120 aaPredicted RBP1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 ATP5HO75947 161 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 PTTG1O95997 202 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 HIST1H1BP16401 226 aaKnown RBP1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 HLA-GP17693 338 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 CD40LGP29965 261 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 RPL27AP46776 148 aaKnown RBP1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 CLDN12P56749 244 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 RPS25P62851 125 aaKnown RBP1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 FABP5Q01469 135 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 IFITM3Q01628 133 aa1.52□□□□□ -2.17
SMARCB1-208ENST00000634926 ATP5G2Q06055 141 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms