RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 IGHV3-11P01762 117 aa15.14■□□□□ 0.01
CHRNA4-209ENST00000627000 IGHG4P01861 327 aa15.14■□□□□ 0.01
CHRNA4-209ENST00000627000 RELQ04864 619 aaPredicted RBP15.14■□□□□ 0.01
CHRNA4-209ENST00000627000 TMEM256Q8N2U0 113 aa15.14■□□□□ 0.01
CHRNA4-209ENST00000627000 NBPF19A0A087WUL8 3843 aa15.13■□□□□ 0.01
CHRNA4-209ENST00000627000 IGKV2-40A0A087WW87 121 aaPredicted RBP15.13■□□□□ 0.01
CHRNA4-209ENST00000627000 IGKV2D-40P01614 121 aaPredicted RBP15.13■□□□□ 0.01
CHRNA4-209ENST00000627000 PF4V1P10720 104 aa15.13■□□□□ 0.01
CHRNA4-209ENST00000627000 RPL19P84098 196 aaKnown RBP15.13■□□□□ 0.01
CHRNA4-209ENST00000627000 TMEM190Q8WZ59 177 aa15.13■□□□□ 0.01
CHRNA4-209ENST00000627000 DAZAP1Q96EP5 407 aaKnown RBP15.13■□□□□ 0.01
CHRNA4-209ENST00000627000 Q96MF0 132 aa15.13■□□□□ 0.01
CHRNA4-209ENST00000627000 ARL3P36405 182 aa15.12■□□□□ 0.01
CHRNA4-209ENST00000627000 KIAA1644Q3SXP7 199 aa15.12■□□□□ 0.01
CHRNA4-209ENST00000627000 WDR73Q6P4I2 378 aa15.12■□□□□ 0.01
CHRNA4-209ENST00000627000 LRRC75A-AS1Q8N1F1 130 aa15.12■□□□□ 0.01
CHRNA4-209ENST00000627000 GBGT1Q8N5D6 347 aa15.12■□□□□ 0.01
CHRNA4-209ENST00000627000 ZNF331Q9NQX6 463 aaPredicted RBP15.12■□□□□ 0.01
CHRNA4-209ENST00000627000 DOPEY2Q9Y3R5 2298 aa15.12■□□□□ 0.01
CHRNA4-209ENST00000627000 ZNF705FA8MVS1 300 aaPredicted RBP15.12■□□□□ 0.01
CHRNA4-209ENST00000627000 NUPR1O60356 82 aa15.12■□□□□ 0.01
CHRNA4-209ENST00000627000 S100A7P31151 101 aa15.12■□□□□ 0.01
CHRNA4-209ENST00000627000 CSN1S1P47710 185 aa15.12■□□□□ 0.01
CHRNA4-209ENST00000627000 ZNF664Q8N3J9 261 aa15.12■□□□□ 0.01
CHRNA4-209ENST00000627000 GTSF1Q8WW33 167 aa15.12■□□□□ 0.01
CHRNA4-209ENST00000627000 C8orf49Q96NF6 230 aa15.12■□□□□ 0.01
CHRNA4-209ENST00000627000 ZFP30Q9Y2G7 519 aa15.12■□□□□ 0.01
CHRNA4-209ENST00000627000 CHEK1O14757 476 aa15.11■□□□□ 0.01
CHRNA4-209ENST00000627000 GDF5OSQ5U4N7 250 aa15.11■□□□□ 0.01
CHRNA4-209ENST00000627000 KRTAP1-3Q8IUG1 177 aa15.11■□□□□ 0.01
CHRNA4-209ENST00000627000 METTL26Q96S19 204 aa15.11■□□□□ 0.01
CHRNA4-209ENST00000627000 TP53TG3Q9ULZ0 132 aa15.11■□□□□ 0.01
CHRNA4-209ENST00000627000 NPIPB6E9PJ23 425 aa15.11■□□□□ 0.01
CHRNA4-209ENST00000627000 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.11■□□□□ 0.01
CHRNA4-209ENST00000627000 ATP6V0BQ99437 205 aa15.11■□□□□ 0.01
CHRNA4-209ENST00000627000 CHD6Q8TD26 2715 aa15.1■□□□□ 0.01
CHRNA4-209ENST00000627000 TENM4Q6N022 2769 aa15.1■□□□□ 0.01
CHRNA4-209ENST00000627000 APCP25054 2843 aa15.1■□□□□ 0.01
CHRNA4-209ENST00000627000 A8MWL6 223 aa15.1■□□□□ 0.01
CHRNA4-209ENST00000627000 H3BUA1 57 aa15.1■□□□□ 0.01
CHRNA4-209ENST00000627000 FSHBP01225 129 aa15.1■□□□□ 0.01
CHRNA4-209ENST00000627000 MT-ND6P03923 174 aa15.1■□□□□ 0.01
CHRNA4-209ENST00000627000 CRIP1P50238 77 aa15.1■□□□□ 0.01
CHRNA4-209ENST00000627000 ZNF124Q15973 351 aa15.1■□□□□ 0.01
CHRNA4-209ENST00000627000 UNQ9165/PRO28630Q6UXU0 137 aa15.1■□□□□ 0.01
CHRNA4-209ENST00000627000 F2Z2F3 143 aa15.09■□□□□ 0.01
CHRNA4-209ENST00000627000 ZNF253O75346 499 aa15.09■□□□□ 0.01
CHRNA4-209ENST00000627000 BRI3O95415 125 aa15.09■□□□□ 0.01
CHRNA4-209ENST00000627000 IGLV1-40P01703 118 aa15.09■□□□□ 0.01
CHRNA4-209ENST00000627000 CRISP2P16562 243 aa15.09■□□□□ 0.01
CHRNA4-209ENST00000627000 RAB9AP51151 201 aa15.09■□□□□ 0.01
CHRNA4-209ENST00000627000 CFHR3Q02985 330 aa15.09■□□□□ 0.01
CHRNA4-209ENST00000627000 CT83Q5H943 113 aa15.09■□□□□ 0.01
CHRNA4-209ENST00000627000 U3KQE9 123 aa15.09■□□□□ 0.01
CHRNA4-209ENST00000627000 A0A087X0K7 114 aa15.09■□□□□ 0.01
CHRNA4-209ENST00000627000 COX19Q49B96 90 aa15.09■□□□□ 0.01
CHRNA4-209ENST00000627000 PRR31Q5SQ13 230 aa15.09■□□□□ 0.01
CHRNA4-209ENST00000627000 RNF182Q8N6D2 247 aa15.09■□□□□ 0.01
CHRNA4-209ENST00000627000 OR2D3Q8NGH3 330 aa15.09■□□□□ 0.01
CHRNA4-209ENST00000627000 USMG5Q96IX5 58 aa15.09■□□□□ 0.01
CHRNA4-209ENST00000627000 TCAPO15273 167 aa15.08■□□□□ 0.01
CHRNA4-209ENST00000627000 HLA-DQA1P01909 254 aa15.08■□□□□ 0.01
CHRNA4-209ENST00000627000 C16orf54Q6UWD8 224 aa15.08■□□□□ 0.01
CHRNA4-209ENST00000627000 WIPF2Q8TF74 440 aaPredicted RBP15.08■□□□□ 0.01
CHRNA4-209ENST00000627000 PGLYRP4Q96LB8 373 aa15.08■□□□□ 0.01
CHRNA4-209ENST00000627000 VGLL1Q99990 258 aa15.08■□□□□ 0.01
CHRNA4-209ENST00000627000 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.08■□□□□ 0
CHRNA4-209ENST00000627000 CAMPP49913 170 aa15.08■□□□□ 0
CHRNA4-209ENST00000627000 LINC00310P59036 64 aa15.08■□□□□ 0
CHRNA4-209ENST00000627000 NUTF2P61970 127 aaKnown RBP15.08■□□□□ 0
CHRNA4-209ENST00000627000 SLAQ13239 276 aa15.08■□□□□ 0
CHRNA4-209ENST00000627000 LCN12Q6JVE5 192 aa15.08■□□□□ 0
CHRNA4-209ENST00000627000 Q8TAT8 98 aa15.08■□□□□ 0
CHRNA4-209ENST00000627000 C1orf194Q5T5A4 169 aa15.07■□□□□ 0
CHRNA4-209ENST00000627000 OR4X2Q8NGF9 303 aa15.07■□□□□ 0
CHRNA4-209ENST00000627000 PRRC2AP48634 2157 aaKnown RBP15.07■□□□□ 0
CHRNA4-209ENST00000627000 SERTM2A0A1B0GWG4 89 aa15.07■□□□□ 0
CHRNA4-209ENST00000627000 PRAC2D3DTV9 90 aa15.07■□□□□ 0
CHRNA4-209ENST00000627000 C10orf99Q6UWK7 81 aa15.07■□□□□ 0
CHRNA4-209ENST00000627000 A0A1B0GXF2 115 aa15.06■□□□□ 0
CHRNA4-209ENST00000627000 APCSP02743 223 aa15.06■□□□□ 0
CHRNA4-209ENST00000627000 PLA2G2AP14555 144 aa15.06■□□□□ 0
CHRNA4-209ENST00000627000 RASL11AQ6T310 242 aa15.06■□□□□ 0
CHRNA4-209ENST00000627000 OR4B1Q8NGF8 309 aa15.06■□□□□ 0
CHRNA4-209ENST00000627000 SSBP4Q9BWG4 385 aaPredicted RBP15.06■□□□□ 0
CHRNA4-209ENST00000627000 ZNF469Q96JG9 3925 aaPredicted RBP15.06■□□□□ 0
CHRNA4-209ENST00000627000 KMT2BQ9UMN6 2715 aaPredicted RBP15.06■□□□□ 0
CHRNA4-209ENST00000627000 MRPL52Q86TS9 123 aaKnown RBP15.05■□□□□ 0
CHRNA4-209ENST00000627000 ARL6IP6Q8N6S5 226 aa15.05■□□□□ 0
CHRNA4-209ENST00000627000 SMAD7O15105 426 aaKnown RBP15.05■□□□□ -0
CHRNA4-209ENST00000627000 GFRA4Q9GZZ7 299 aa15.05■□□□□ -0
CHRNA4-209ENST00000627000 TRAV8-2A0A0B4J237 113 aa15.04■□□□□ -0
CHRNA4-209ENST00000627000 M0R143 59 aa15.04■□□□□ -0
CHRNA4-209ENST00000627000 NDUFA4O00483 81 aa15.04■□□□□ -0
CHRNA4-209ENST00000627000 SERF1AO75920 110 aa15.04■□□□□ -0
CHRNA4-209ENST00000627000 SRIP30626 198 aa15.04■□□□□ -0
CHRNA4-209ENST00000627000 ERCC8Q13216 396 aa15.04■□□□□ -0
CHRNA4-209ENST00000627000 Q6YL49 198 aa15.04■□□□□ -0
CHRNA4-209ENST00000627000 RBPMS2Q6ZRY4 209 aaKnown RBP15.04■□□□□ -0
CHRNA4-209ENST00000627000 ATP5L2Q7Z4Y8 100 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms