RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 ORAOV1Q8WV07 137 aa11.51□□□□□ -0.57
CDH1-213ENST00000612417 C1RLQ9NZP8 487 aa11.51□□□□□ -0.57
CDH1-213ENST00000612417 CRXO43186 299 aaPredicted RBP11.51□□□□□ -0.57
CDH1-213ENST00000612417 PSG3Q16557 428 aa11.51□□□□□ -0.57
CDH1-213ENST00000612417 ZNF562Q6V9R5 426 aa11.51□□□□□ -0.57
CDH1-213ENST00000612417 GATD1Q8NB37 220 aa11.51□□□□□ -0.57
CDH1-213ENST00000612417 ZC2HC1AQ96GY0 325 aa11.51□□□□□ -0.57
CDH1-213ENST00000612417 ZNF414Q96IQ9 312 aa11.51□□□□□ -0.57
CDH1-213ENST00000612417 C17orf77Q96MU5 243 aa11.51□□□□□ -0.57
CDH1-213ENST00000612417 FANCD2OSQ96PS1 177 aa11.51□□□□□ -0.57
CDH1-213ENST00000612417 ABCA2Q9BZC7 2435 aa11.51□□□□□ -0.57
CDH1-213ENST00000612417 CD24P25063 80 aa11.5□□□□□ -0.57
CDH1-213ENST00000612417 PTTG1IPP53801 180 aa11.5□□□□□ -0.57
CDH1-213ENST00000612417 HES1Q14469 280 aa11.5□□□□□ -0.57
CDH1-213ENST00000612417 LCN12Q6JVE5 192 aa11.5□□□□□ -0.57
CDH1-213ENST00000612417 POLQO75417 2590 aa11.5□□□□□ -0.57
CDH1-213ENST00000612417 DOPEY2Q9Y3R5 2298 aa11.5□□□□□ -0.57
CDH1-213ENST00000612417 CBY3A6NI87 242 aa11.5□□□□□ -0.57
CDH1-213ENST00000612417 OOSP1A8MZH6 123 aa11.5□□□□□ -0.57
CDH1-213ENST00000612417 CHEK1O14757 476 aa11.5□□□□□ -0.57
CDH1-213ENST00000612417 GNG7O60262 68 aa11.5□□□□□ -0.57
CDH1-213ENST00000612417 CCDC144NLQ6NUI1 221 aa11.5□□□□□ -0.57
CDH1-213ENST00000612417 Q71RC1 249 aaPredicted RBP11.5□□□□□ -0.57
CDH1-213ENST00000612417 TTC9CQ8N5M4 171 aa11.5□□□□□ -0.57
CDH1-213ENST00000612417 PSG8Q9UQ74 426 aa11.5□□□□□ -0.57
CDH1-213ENST00000612417 TRAV9-2A0A087WT02 112 aa11.49□□□□□ -0.57
CDH1-213ENST00000612417 A0A1B0GUT8 65 aa11.49□□□□□ -0.57
CDH1-213ENST00000612417 SH2D7A6NKC9 451 aaPredicted RBP11.49□□□□□ -0.57
CDH1-213ENST00000612417 F8W735 103 aaPredicted RBP11.49□□□□□ -0.57
CDH1-213ENST00000612417 MFAP4P55083 255 aa11.49□□□□□ -0.57
CDH1-213ENST00000612417 DSCR9P59020 149 aa11.49□□□□□ -0.57
CDH1-213ENST00000612417 FBLN7Q53RD9 439 aa11.49□□□□□ -0.57
CDH1-213ENST00000612417 MINOS1Q5TGZ0 78 aa11.49□□□□□ -0.57
CDH1-213ENST00000612417 Q8N6K4 173 aa11.49□□□□□ -0.57
CDH1-213ENST00000612417 ARPC1AQ92747 370 aa11.49□□□□□ -0.57
CDH1-213ENST00000612417 TMEM70Q9BUB7 260 aa11.49□□□□□ -0.57
CDH1-213ENST00000612417 MINOS1-NBL1R4GNA1 71 aa11.49□□□□□ -0.57
CDH1-213ENST00000612417 FBN2P35556 2912 aa11.49□□□□□ -0.57
CDH1-213ENST00000612417 PTPN13Q12923 2485 aa11.49□□□□□ -0.57
CDH1-213ENST00000612417 A0A1B0GW15 77 aa11.48□□□□□ -0.57
CDH1-213ENST00000612417 UBE2E1P51965 193 aa11.48□□□□□ -0.57
CDH1-213ENST00000612417 EBI3Q14213 229 aa11.48□□□□□ -0.57
CDH1-213ENST00000612417 KLF17Q5JT82 389 aaPredicted RBP11.48□□□□□ -0.57
CDH1-213ENST00000612417 Q6AWC8 147 aa11.48□□□□□ -0.57
CDH1-213ENST00000612417 VPS25Q9BRG1 176 aa11.48□□□□□ -0.57
CDH1-213ENST00000612417 TENM4Q6N022 2769 aa11.48□□□□□ -0.57
CDH1-213ENST00000612417 SVEP1Q4LDE5 3571 aa11.48□□□□□ -0.57
CDH1-213ENST00000612417 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.48□□□□□ -0.57
CDH1-213ENST00000612417 IGHV1-24A0A0C4DH33 117 aa11.48□□□□□ -0.57
CDH1-213ENST00000612417 SERTM2A0A1B0GWG4 89 aa11.48□□□□□ -0.57
CDH1-213ENST00000612417 PLA2G2AP14555 144 aa11.48□□□□□ -0.57
CDH1-213ENST00000612417 FCGR2BP31994 310 aaPredicted RBP11.48□□□□□ -0.57
CDH1-213ENST00000612417 Q56UQ5 140 aa11.48□□□□□ -0.57
CDH1-213ENST00000612417 Q6ZN92 141 aa11.48□□□□□ -0.57
CDH1-213ENST00000612417 DYNAPQ8N1N2 210 aa11.48□□□□□ -0.57
CDH1-213ENST00000612417 TXN2Q99757 166 aa11.48□□□□□ -0.57
CDH1-213ENST00000612417 ABCA12Q86UK0 2595 aa11.48□□□□□ -0.57
CDH1-213ENST00000612417 J3QKU1 62 aa11.47□□□□□ -0.57
CDH1-213ENST00000612417 HNRNPA3P51991 378 aaKnown RBP11.47□□□□□ -0.57
CDH1-213ENST00000612417 RPS20P60866 119 aaKnown RBP11.47□□□□□ -0.57
CDH1-213ENST00000612417 NDPQ00604 133 aa11.47□□□□□ -0.57
CDH1-213ENST00000612417 RNF151Q2KHN1 245 aa11.47□□□□□ -0.57
CDH1-213ENST00000612417 ATOH7Q8N100 152 aa11.47□□□□□ -0.57
CDH1-213ENST00000612417 OR5AL1P0C617 328 aa11.47□□□□□ -0.57
CDH1-213ENST00000612417 CRIP1P50238 77 aa11.47□□□□□ -0.57
CDH1-213ENST00000612417 KRTAP10-9P60411 292 aa11.47□□□□□ -0.57
CDH1-213ENST00000612417 RIGQ13278 110 aa11.47□□□□□ -0.57
CDH1-213ENST00000612417 AAMDCQ9H7C9 122 aa11.47□□□□□ -0.57
CDH1-213ENST00000612417 CLEC5AQ9NY25 188 aa11.47□□□□□ -0.57
CDH1-213ENST00000612417 C21orf62Q9NYP8 219 aa11.47□□□□□ -0.57
CDH1-213ENST00000612417 MRPS16Q9Y3D3 137 aaKnown RBP11.47□□□□□ -0.57
CDH1-213ENST00000612417 M0QZ24 198 aa11.46□□□□□ -0.57
CDH1-213ENST00000612417 PAX8Q06710 450 aa11.46□□□□□ -0.57
CDH1-213ENST00000612417 PRR31Q5SQ13 230 aa11.46□□□□□ -0.57
CDH1-213ENST00000612417 COX8CQ7Z4L0 72 aa11.46□□□□□ -0.57
CDH1-213ENST00000612417 SPATA12Q7Z6I5 190 aa11.46□□□□□ -0.57
CDH1-213ENST00000612417 THYN1Q9P016 225 aa11.46□□□□□ -0.57
CDH1-213ENST00000612417 LAMTOR2Q9Y2Q5 125 aa11.46□□□□□ -0.57
CDH1-213ENST00000612417 CSMD2Q7Z408 3487 aa11.46□□□□□ -0.57
CDH1-213ENST00000612417 M0R3E3 92 aa11.45□□□□□ -0.58
CDH1-213ENST00000612417 ARMS2P0C7Q2 107 aa11.45□□□□□ -0.58
CDH1-213ENST00000612417 TSPOP30536 169 aa11.45□□□□□ -0.58
CDH1-213ENST00000612417 SAA4P35542 130 aa11.45□□□□□ -0.58
CDH1-213ENST00000612417 UBE2V1Q13404 147 aa11.45□□□□□ -0.58
CDH1-213ENST00000612417 IGHV3OR16-10A0A075B7F0 116 aa11.45□□□□□ -0.58
CDH1-213ENST00000612417 NCBP2LA6PVI3 153 aaKnown RBP11.45□□□□□ -0.58
CDH1-213ENST00000612417 SYS1-DBNDD2H3BUS1 97 aa11.45□□□□□ -0.58
CDH1-213ENST00000612417 NPFFO15130 113 aa11.45□□□□□ -0.58
CDH1-213ENST00000612417 CCL25O15444 150 aa11.45□□□□□ -0.58
CDH1-213ENST00000612417 LEPROTL1O95214 131 aa11.45□□□□□ -0.58
CDH1-213ENST00000612417 PSG9Q00887 426 aa11.45□□□□□ -0.58
CDH1-213ENST00000612417 BATFQ16520 125 aa11.45□□□□□ -0.58
CDH1-213ENST00000612417 BCL6BQ8N143 479 aaPredicted RBP11.45□□□□□ -0.58
CDH1-213ENST00000612417 CLUHP3Q96NS8 147 aa11.45□□□□□ -0.58
CDH1-213ENST00000612417 S4R3C0 116 aa11.45□□□□□ -0.58
CDH1-213ENST00000612417 CENPVL3A0A0U1RRI6 287 aa11.44□□□□□ -0.58
CDH1-213ENST00000612417 CT45A10P0DMU9 189 aa11.44□□□□□ -0.58
CDH1-213ENST00000612417 IGLL1P15814 213 aa11.44□□□□□ -0.58
CDH1-213ENST00000612417 SLC25A16P16260 332 aa11.44□□□□□ -0.58
CDH1-213ENST00000612417 FBLL1A6NHQ2 334 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms