RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 NXT2Q9NPJ8 142 aaKnown RBP17.52■□□□□ 0.4
SHANK2-220ENST00000608988 SPCS1Q9Y6A9 102 aa17.52■□□□□ 0.4
SHANK2-220ENST00000608988 SCGB2A1O75556 95 aa17.52■□□□□ 0.39
SHANK2-220ENST00000608988 DEFB124Q8NES8 71 aa17.52■□□□□ 0.39
SHANK2-220ENST00000608988 NPBQ8NG41 125 aa17.52■□□□□ 0.39
SHANK2-220ENST00000608988 NPIPB5A8MRT5 1133 aa17.51■□□□□ 0.39
SHANK2-220ENST00000608988 PRRG2O14669 202 aa17.51■□□□□ 0.39
SHANK2-220ENST00000608988 NBR2O15453 112 aa17.51■□□□□ 0.39
SHANK2-220ENST00000608988 FCER1GP30273 86 aa17.51■□□□□ 0.39
SHANK2-220ENST00000608988 TWIST1Q15672 202 aa17.51■□□□□ 0.39
SHANK2-220ENST00000608988 HILPDAQ9Y5L2 63 aa17.51■□□□□ 0.39
SHANK2-220ENST00000608988 NDUFA3O95167 84 aa17.5■□□□□ 0.39
SHANK2-220ENST00000608988 NMUP48645 174 aa17.5■□□□□ 0.39
SHANK2-220ENST00000608988 ASCL2Q99929 193 aa17.5■□□□□ 0.39
SHANK2-220ENST00000608988 TMSB15BA0A087X1C1 80 aa17.5■□□□□ 0.39
SHANK2-220ENST00000608988 ARFGEF3Q5TH69 2177 aa17.49■□□□□ 0.39
SHANK2-220ENST00000608988 PPIAL4CA0A0B4J2A2 164 aa17.49■□□□□ 0.39
SHANK2-220ENST00000608988 SPAARA0A1B0GVQ0 90 aa17.49■□□□□ 0.39
SHANK2-220ENST00000608988 PPIAL4GP0DN37 164 aa17.49■□□□□ 0.39
SHANK2-220ENST00000608988 EGR2P11161 476 aaPredicted RBP17.49■□□□□ 0.39
SHANK2-220ENST00000608988 GFRALQ6UXV0 394 aa17.49■□□□□ 0.39
SHANK2-220ENST00000608988 PCP2Q8IVA1 136 aa17.49■□□□□ 0.39
SHANK2-220ENST00000608988 IGLV11-55A0A075B6I3 123 aa17.48■□□□□ 0.39
SHANK2-220ENST00000608988 B9A039 149 aa17.48■□□□□ 0.39
SHANK2-220ENST00000608988 PLXNB1O43157 2135 aa17.48■□□□□ 0.39
SHANK2-220ENST00000608988 EVI2AP22794 236 aa17.48■□□□□ 0.39
SHANK2-220ENST00000608988 COX7A1P24310 79 aa17.48■□□□□ 0.39
SHANK2-220ENST00000608988 E7EQL1 145 aa17.48■□□□□ 0.39
SHANK2-220ENST00000608988 ATP5LO75964 103 aa17.48■□□□□ 0.39
SHANK2-220ENST00000608988 SRSF1Q07955 248 aaKnown RBP eCLIP17.48■□□□□ 0.39
SHANK2-220ENST00000608988 SAMD5Q5TGI4 173 aa17.48■□□□□ 0.39
SHANK2-220ENST00000608988 TIMM23O14925 209 aa17.47■□□□□ 0.39
SHANK2-220ENST00000608988 ODF1Q14990 250 aa17.47■□□□□ 0.39
SHANK2-220ENST00000608988 RNF185Q96GF1 192 aa17.47■□□□□ 0.39
SHANK2-220ENST00000608988 DKK2Q9UBU2 259 aa17.47■□□□□ 0.39
SHANK2-220ENST00000608988 TMEM238C9JI98 176 aa17.46■□□□□ 0.39
SHANK2-220ENST00000608988 IGKV2-40A0A087WW87 121 aaPredicted RBP17.46■□□□□ 0.38
SHANK2-220ENST00000608988 IGKV2D-40P01614 121 aaPredicted RBP17.46■□□□□ 0.38
SHANK2-220ENST00000608988 RAB37Q96AX2 223 aa17.45■□□□□ 0.38
SHANK2-220ENST00000608988 ICE1Q9Y2F5 2266 aa17.45■□□□□ 0.38
SHANK2-220ENST00000608988 NBEAQ8NFP9 2946 aa17.44■□□□□ 0.38
SHANK2-220ENST00000608988 MALRD1Q5VYJ5 2156 aa17.44■□□□□ 0.38
SHANK2-220ENST00000608988 SMKR1H3BMG3 65 aa17.44■□□□□ 0.38
SHANK2-220ENST00000608988 IGKCP01834 107 aa17.44■□□□□ 0.38
SHANK2-220ENST00000608988 TTC9CQ8N5M4 171 aa17.44■□□□□ 0.38
SHANK2-220ENST00000608988 OR11H6Q8NGC7 330 aa17.44■□□□□ 0.38
SHANK2-220ENST00000608988 FANCD2OSQ96PS1 177 aa17.44■□□□□ 0.38
SHANK2-220ENST00000608988 C21orf62Q9NYP8 219 aa17.44■□□□□ 0.38
SHANK2-220ENST00000608988 DPM3Q9P2X0 92 aa17.44■□□□□ 0.38
SHANK2-220ENST00000608988 HHLA3Q9XRX5 114 aa17.44■□□□□ 0.38
SHANK2-220ENST00000608988 FABP5P3A8MUU1 101 aa17.44■□□□□ 0.38
SHANK2-220ENST00000608988 LEPP41159 167 aa17.44■□□□□ 0.38
SHANK2-220ENST00000608988 RIPPLY3P57055 190 aa17.44■□□□□ 0.38
SHANK2-220ENST00000608988 TAL2Q16559 108 aa17.44■□□□□ 0.38
SHANK2-220ENST00000608988 BCL6BQ8N143 479 aaPredicted RBP17.44■□□□□ 0.38
SHANK2-220ENST00000608988 LY6G5BQ8NDX9 201 aa17.44■□□□□ 0.38
SHANK2-220ENST00000608988 CFHR4Q92496 578 aa17.44■□□□□ 0.38
SHANK2-220ENST00000608988 CHAC1Q9BUX1 264 aa17.44■□□□□ 0.38
SHANK2-220ENST00000608988 TM2D2Q9BX73 214 aa17.44■□□□□ 0.38
SHANK2-220ENST00000608988 Q8N8P6 123 aa17.43■□□□□ 0.38
SHANK2-220ENST00000608988 PSMG3-AS1Q96PY0 264 aa17.43■□□□□ 0.38
SHANK2-220ENST00000608988 RBAKDNA6NC62 111 aa17.42■□□□□ 0.38
SHANK2-220ENST00000608988 DPM2O94777 84 aa17.42■□□□□ 0.38
SHANK2-220ENST00000608988 TNFRSF6BO95407 300 aa17.42■□□□□ 0.38
SHANK2-220ENST00000608988 FXYD7P58549 80 aa17.42■□□□□ 0.38
SHANK2-220ENST00000608988 C5orf64Q2M2E5 130 aa17.42■□□□□ 0.38
SHANK2-220ENST00000608988 ZNF562Q6V9R5 426 aa17.42■□□□□ 0.38
SHANK2-220ENST00000608988 PRSS47A8MTI9 375 aa17.41■□□□□ 0.38
SHANK2-220ENST00000608988 F8W735 103 aaPredicted RBP17.41■□□□□ 0.38
SHANK2-220ENST00000608988 ZNF80P51504 273 aaPredicted RBP17.41■□□□□ 0.38
SHANK2-220ENST00000608988 DLX1P56177 255 aa17.41■□□□□ 0.38
SHANK2-220ENST00000608988 GCSHP23434 173 aa17.41■□□□□ 0.38
SHANK2-220ENST00000608988 RAB9AP51151 201 aa17.41■□□□□ 0.38
SHANK2-220ENST00000608988 PRSS57Q6UWY2 283 aa17.41■□□□□ 0.38
SHANK2-220ENST00000608988 OTOGLQ3ZCN5 2332 aa17.4■□□□□ 0.38
SHANK2-220ENST00000608988 ZNF575Q86XF7 245 aa17.4■□□□□ 0.38
SHANK2-220ENST00000608988 NAA38Q9BRA0 125 aaKnown RBP17.4■□□□□ 0.38
SHANK2-220ENST00000608988 ORM1P02763 201 aa17.39■□□□□ 0.38
SHANK2-220ENST00000608988 PRSS1P07477 247 aa17.39■□□□□ 0.38
SHANK2-220ENST00000608988 SCGB1A1P11684 91 aa17.39■□□□□ 0.38
SHANK2-220ENST00000608988 ARPC1AQ92747 370 aa17.39■□□□□ 0.38
SHANK2-220ENST00000608988 VGLL1Q99990 258 aa17.39■□□□□ 0.38
SHANK2-220ENST00000608988 PHLDA1Q8WV24 401 aaPredicted RBP17.39■□□□□ 0.37
SHANK2-220ENST00000608988 ONECUT1Q9UBC0 465 aa17.39■□□□□ 0.37
SHANK2-220ENST00000608988 CD3EP07766 207 aa17.38■□□□□ 0.37
SHANK2-220ENST00000608988 FXYD2P54710 66 aa17.38■□□□□ 0.37
SHANK2-220ENST00000608988 CEND1Q8N111 149 aa17.38■□□□□ 0.37
SHANK2-220ENST00000608988 C18orf15Q96N68 181 aa17.38■□□□□ 0.37
SHANK2-220ENST00000608988 CUL9Q8IWT3 2517 aa17.38■□□□□ 0.37
SHANK2-220ENST00000608988 SVILO95425 2214 aa17.38■□□□□ 0.37
SHANK2-220ENST00000608988 IGHG4P01861 327 aa17.37■□□□□ 0.37
SHANK2-220ENST00000608988 PRB3Q04118 309 aaPredicted RBP17.37■□□□□ 0.37
SHANK2-220ENST00000608988 KLF17Q5JT82 389 aaPredicted RBP17.37■□□□□ 0.37
SHANK2-220ENST00000608988 SMAD5-AS1Q9Y6J3 95 aa17.37■□□□□ 0.37
SHANK2-220ENST00000608988 TRBV25-1A0A075B6N4 114 aa17.37■□□□□ 0.37
SHANK2-220ENST00000608988 IGKV2D-26A0A0A0MRZ7 120 aa17.37■□□□□ 0.37
SHANK2-220ENST00000608988 Q8TAT8 98 aa17.37■□□□□ 0.37
SHANK2-220ENST00000608988 CELSR3Q9NYQ7 3312 aa17.36■□□□□ 0.37
SHANK2-220ENST00000608988 M0R1W7 72 aa17.36■□□□□ 0.37
SHANK2-220ENST00000608988 TCTAP57738 103 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms