RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 C4orf22Q6V702 233 aa1.15□□□□□ -2.23
UBE2E3-212ENST00000602888 FP248Q71RG6 208 aaPredicted RBP1.15□□□□□ -2.23
UBE2E3-212ENST00000602888 MIR17HGQ75NE6 70 aa1.15□□□□□ -2.23
UBE2E3-212ENST00000602888 LINC00305Q7Z4B0 112 aa1.15□□□□□ -2.23
UBE2E3-212ENST00000602888 HIST3H2BBQ8N257 126 aa1.15□□□□□ -2.23
UBE2E3-212ENST00000602888 SIGLECL1Q8N7X8 197 aa1.15□□□□□ -2.23
UBE2E3-212ENST00000602888 PFN4Q8NHR9 129 aa1.15□□□□□ -2.23
UBE2E3-212ENST00000602888 PPTC7Q8NI37 304 aa1.15□□□□□ -2.23
UBE2E3-212ENST00000602888 ARL11Q969Q4 196 aa1.15□□□□□ -2.23
UBE2E3-212ENST00000602888 SLC39A9Q9NUM3 307 aa1.15□□□□□ -2.23
UBE2E3-212ENST00000602888 CKLFQ9UBR5 152 aa1.15□□□□□ -2.23
UBE2E3-212ENST00000602888 NAT8Q9UHE5 227 aa1.15□□□□□ -2.23
UBE2E3-212ENST00000602888 EPDR1Q9UM22 224 aa1.15□□□□□ -2.23
UBE2E3-212ENST00000602888 RTL9Q8NET4 1388 aa1.15□□□□□ -2.23
UBE2E3-212ENST00000602888 COL1A1P02452 1464 aaPredicted RBP1.15□□□□□ -2.23
UBE2E3-212ENST00000602888 PLXNA2O75051 1894 aa1.15□□□□□ -2.23
UBE2E3-212ENST00000602888 MICAL3Q7RTP6 2002 aa1.15□□□□□ -2.23
UBE2E3-212ENST00000602888 ABCA3Q99758 1704 aa1.15□□□□□ -2.23
UBE2E3-212ENST00000602888 DLC1Q96QB1 1528 aa1.15□□□□□ -2.23
UBE2E3-212ENST00000602888 NISCHQ9Y2I1 1504 aa1.15□□□□□ -2.23
UBE2E3-212ENST00000602888 POLEQ07864 2286 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 MGAMO43451 1857 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 ANK1P16157 1881 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 COL4A5P29400 1685 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 ADGRB1O14514 1584 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 IGKV3-7A0A075B6H7 116 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 TRAV7A0A075B6U4 112 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 A0A087X0T9 212 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 IGHV1-58A0A0C4DH39 117 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 ZNF727A8MUV8 499 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 ZNF670-ZNF695F2Z2N8 137 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 M0R2Z0 102 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 NPFFO15130 113 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 PAEPP09466 180 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 TSPAN19P0C672 248 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 SMIM6P0DI80 62 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 CRYGAP11844 174 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 S100A4P26447 101 aaKnown RBP1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 EIF2B2P49770 351 aaKnown RBP1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 AQP4P55087 323 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 HBBP68871 147 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 WHAMMP3Q1A5X7 153 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 OCIAD2Q56VL3 154 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 FAM27BQ5VT28 67 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 HAGHLQ6PII5 290 aaPredicted RBP1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 PHF5AQ7RTV0 110 aaKnown RBP1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 SNX29P2Q8IUI4 249 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 C1orf54Q8WWF1 131 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 ISOC1Q96CN7 298 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 HIST1H2BLQ99880 126 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 BANF2Q9H503 90 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 BAZ2BQ9UIF8 2168 aaKnown RBP1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 DISP2A7MBM2 1401 aa1.14□□□□□ -2.23
UBE2E3-212ENST00000602888 MUC22E2RYF6 1773 aaPredicted RBP1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 CASZ1Q86V15 1759 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 DIDO1Q9BTC0 2240 aaKnown RBP1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 TTC37Q6PGP7 1564 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 RAPGEF2Q9Y4G8 1499 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 KIAA1549LQ6ZVL6 1849 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 KIAA1551Q9HCM1 1747 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 TRAV13-1A0A0B4J241 112 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 IRGMA1A4Y4 181 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 CCDC179H3BU77 68 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 K7ERU9 68 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 NDUFB3O43676 98 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 MRPS14O60783 128 aaKnown RBP1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 GGCTO75223 188 aaKnown RBP1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 CST7O76096 145 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 SLC25A5P05141 298 aaKnown RBP1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 IL9P15248 144 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 CRYGSP22914 178 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 RPL22P35268 128 aaKnown RBP1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 SRP14P37108 136 aaKnown RBP1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 FOXA3P55318 350 aaPredicted RBP1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 SNRPD3P62318 126 aaKnown RBP1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 DYNLT1P63172 113 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 EIF5AP63241 154 aaKnown RBP1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 BCL2L15Q5TBC7 163 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 C22orf39Q6P5X5 142 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 C7orf65Q6ZTY9 151 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 DEFB128Q7Z7B8 93 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 CROCCP2Q86T23 111 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 RPS19BP1Q86WX3 136 aaKnown RBP1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 CTAGE3PQ8IX95 158 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 Q8IYB0 196 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 LINC00311Q8N616 119 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 ZNF418Q8TF45 676 aaPredicted RBP1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 NAT14Q8WUY8 206 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 AQP3Q92482 292 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 TMEM203Q969S6 136 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 TMEM106AQ96A25 262 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 AP1S3Q96PC3 154 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 SCGB3A1Q96QR1 104 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 SDF2Q99470 211 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 LXNQ9BS40 222 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 ADAT1Q9BUB4 502 aaKnown RBP1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 NPCDR1Q9BY65 106 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 XAGE1AQ9HD64 81 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 OSTCQ9NRP0 149 aa1.13□□□□□ -2.23
UBE2E3-212ENST00000602888 LAMTOR3Q9UHA4 124 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms