RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 CCDC18Q5T9S5 1454 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 CCDC141Q6ZP82 1450 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 TRPM7Q96QT4 1865 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 NEXMIFQ5QGS0 1516 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 HERC2O95714 4834 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 FAM208BQ5VWN6 2430 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 LMO7Q8WWI1 1683 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 JMJD1CQ15652 2540 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 hCG_1818297A0A087WSY0 165 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 A0A087WX48 190 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 C2orf70A6NJV1 201 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 A8MT66 165 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 OR2B3O76000 313 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 OR7C1O76099 320 aaPredicted RBP0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 C8GP07360 202 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 ASAH2BP0C7U1 165 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 BAALC-AS2P0C853 105 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 CYBAP13498 195 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 PPIBP23284 216 aaKnown RBP0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 CASP1P29466 404 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 HOXA6P31267 233 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 YPEL3P61236 119 aaPredicted RBP0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 AKIRIN2Q53H80 203 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 KHDC3LQ587J8 217 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 Q6Q795 121 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 LCA10Q71F78 164 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 PHF13Q86YI8 300 aaPredicted RBP0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 KRT222Q8N1A0 295 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 LINC00471Q8N535 108 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 OR51A2Q8NGJ7 313 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 OR13D1Q8NGV5 346 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 OR4C6Q8NH72 309 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 DNAJC9Q8WXX5 260 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 ADAT3Q96EY9 351 aaPredicted RBP0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 GINS4Q9BRT9 223 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 SLC50A1Q9BRV3 221 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 OSTCQ9NRP0 149 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 TAS2R4Q9NYW5 299 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 EPDR1Q9UM22 224 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 A0A0G2JMZ2 1700 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 C4AP0C0L4 1744 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 C4BP0C0L5 1744 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 ANKRD26Q9UPS8 1709 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 ARFGEF1Q9Y6D6 1849 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 ARHGEF10O15013 1369 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 PRKDCP78527 4128 aaKnown RBP0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 PLXNA1Q9UIW2 1896 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 ZANQ9Y493 2812 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 BCL9O00512 1426 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 TPRP12270 2363 aaKnown RBP0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 RRBP1Q9P2E9 1410 aaKnown RBP0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 NCOR1O75376 2440 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 ANK3Q12955 4377 aaKnown RBP0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 FYCO1Q9BQS8 1478 aa0.54□□□□□ -2.32
HMGN1P30-201ENST00000589286 TRPM1Q7Z4N2 1603 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 KIAA0100Q14667 2235 aaKnown RBP0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 QSER1Q2KHR3 1735 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 DDX60LQ5H9U9 1706 aaKnown RBP0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 PTPRZ1P23471 2315 aaPredicted RBP0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 WNK3Q9BYP7 1800 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 DYNC2H1Q8NCM8 4307 aaKnown RBP0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 LOC110117498A0A087WWA1 95 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 FAM159BA6NKW6 160 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 TMEM210A6NLX4 147 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 OR1I1O60431 355 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 LYZL6O75951 148 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 UBL3O95164 117 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 OR4E1P0C645 316 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 S100A4P26447 101 aaKnown RBP0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 TRAPPC6BQ86SZ2 158 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 LINC00311Q8N616 119 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 OR11H6Q8NGC7 330 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 OR10J5Q8NHC4 309 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 WFDC5Q8TCV5 224 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 SIGMAR1Q99720 223 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 NHP2Q9NX24 153 aaKnown RBP0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 TVP23BQ9NYZ1 205 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 HS3ST2Q9Y278 367 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 DNAH7Q8WXX0 4024 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 CCNB3Q8WWL7 1395 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 HFM1A2PYH4 1435 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 ZNF609O15014 1411 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 KDM6AO15550 1401 aaPredicted RBP0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 TROQ12816 1431 aaPredicted RBP0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 PPIP5K1Q6PFW1 1433 aa0.53□□□□□ -2.32
HMGN1P30-201ENST00000589286 MBD5Q9P267 1494 aa0.53□□□□□ -2.33
HMGN1P30-201ENST00000589286 CDC42BPGQ6DT37 1551 aa0.53□□□□□ -2.33
HMGN1P30-201ENST00000589286 NAV3Q8IVL0 2385 aa0.53□□□□□ -2.33
HMGN1P30-201ENST00000589286 LAMC1P11047 1609 aa0.53□□□□□ -2.33
HMGN1P30-201ENST00000589286 IQGAP3Q86VI3 1631 aa0.53□□□□□ -2.33
HMGN1P30-201ENST00000589286 SPTAN1Q13813 2472 aaKnown RBP0.53□□□□□ -2.33
HMGN1P30-201ENST00000589286 E9PCH4 1651 aa0.53□□□□□ -2.33
HMGN1P30-201ENST00000589286 ALS2Q96Q42 1657 aa0.53□□□□□ -2.33
HMGN1P30-201ENST00000589286 MTORP42345 2549 aa0.53□□□□□ -2.33
HMGN1P30-201ENST00000589286 MUC2Q02817 5179 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 TJP1Q07157 1748 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 CRYBG1Q9Y4K1 1723 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 KDM3BQ7LBC6 1761 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 TAF1LQ8IZX4 1826 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 UBR3Q6ZT12 1888 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms