RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 SIRPDQ9H106 197 aa5.79□□□□□ -1.48
ZNF540-206ENST00000589117 OR2T8A6NH00 312 aa5.79□□□□□ -1.48
ZNF540-206ENST00000589117 SH2D7A6NKC9 451 aaPredicted RBP5.79□□□□□ -1.48
ZNF540-206ENST00000589117 VWC2LB2RUY7 222 aa5.79□□□□□ -1.48
ZNF540-206ENST00000589117 TCAPO15273 167 aa5.79□□□□□ -1.48
ZNF540-206ENST00000589117 LEPROTL1O95214 131 aa5.79□□□□□ -1.48
ZNF540-206ENST00000589117 ZFP36P26651 326 aaKnown RBP5.79□□□□□ -1.48
ZNF540-206ENST00000589117 RNF151Q2KHN1 245 aa5.79□□□□□ -1.48
ZNF540-206ENST00000589117 ZC2HC1AQ96GY0 325 aa5.79□□□□□ -1.48
ZNF540-206ENST00000589117 C17orf77Q96MU5 243 aa5.79□□□□□ -1.48
ZNF540-206ENST00000589117 HSPB8Q9UJY1 196 aa5.79□□□□□ -1.48
ZNF540-206ENST00000589117 IGHV7-81A0A0B4J1V7 117 aa5.78□□□□□ -1.48
ZNF540-206ENST00000589117 TMEM189A5PLL7 270 aa5.78□□□□□ -1.48
ZNF540-206ENST00000589117 HSBP1L1C9JCN9 74 aa5.78□□□□□ -1.48
ZNF540-206ENST00000589117 MRPS12O15235 138 aaKnown RBP5.78□□□□□ -1.48
ZNF540-206ENST00000589117 CTSGP08311 255 aa5.78□□□□□ -1.48
ZNF540-206ENST00000589117 UNQ5815/PRO19632Q6UWF5 114 aa5.78□□□□□ -1.48
ZNF540-206ENST00000589117 Q8N9W7 124 aa5.78□□□□□ -1.48
ZNF540-206ENST00000589117 FAM110DQ8TAY7 271 aaPredicted RBP5.78□□□□□ -1.48
ZNF540-206ENST00000589117 MAP1LC3CQ9BXW4 147 aa5.78□□□□□ -1.48
ZNF540-206ENST00000589117 TRAV9-2A0A087WT02 112 aa5.77□□□□□ -1.49
ZNF540-206ENST00000589117 TPPP3Q9BW30 176 aa5.77□□□□□ -1.49
ZNF540-206ENST00000589117 S4R3C0 116 aa5.77□□□□□ -1.49
ZNF540-206ENST00000589117 TRBV7-1A0A0A6YYK4 115 aa5.77□□□□□ -1.49
ZNF540-206ENST00000589117 M0R3E3 92 aa5.77□□□□□ -1.49
ZNF540-206ENST00000589117 CRXO43186 299 aaPredicted RBP5.77□□□□□ -1.49
ZNF540-206ENST00000589117 IGLC3P0DOY3 106 aa5.77□□□□□ -1.49
ZNF540-206ENST00000589117 SAA4P35542 130 aa5.77□□□□□ -1.49
ZNF540-206ENST00000589117 CTRLP40313 264 aa5.77□□□□□ -1.49
ZNF540-206ENST00000589117 HNRNPA3P51991 378 aaKnown RBP5.77□□□□□ -1.49
ZNF540-206ENST00000589117 NDPQ00604 133 aa5.77□□□□□ -1.49
ZNF540-206ENST00000589117 RELQ04864 619 aaPredicted RBP5.77□□□□□ -1.49
ZNF540-206ENST00000589117 C15orf32Q32M92 178 aa5.77□□□□□ -1.49
ZNF540-206ENST00000589117 COL5A1-AS1Q5SY13 56 aa5.77□□□□□ -1.49
ZNF540-206ENST00000589117 Q6ZN92 141 aa5.77□□□□□ -1.49
ZNF540-206ENST00000589117 COX8CQ7Z4L0 72 aa5.77□□□□□ -1.49
ZNF540-206ENST00000589117 DYNAPQ8N1N2 210 aa5.77□□□□□ -1.49
ZNF540-206ENST00000589117 C11orf44Q8N8P7 122 aa5.77□□□□□ -1.49
ZNF540-206ENST00000589117 Q8N976 141 aa5.77□□□□□ -1.49
ZNF540-206ENST00000589117 PRSS3P2Q8NHM4 247 aa5.77□□□□□ -1.49
ZNF540-206ENST00000589117 EEF1AKMT3Q96AZ1 226 aa5.77□□□□□ -1.49
ZNF540-206ENST00000589117 TMEM191AQ9H0A3 160 aa5.77□□□□□ -1.49
ZNF540-206ENST00000589117 ABCA4P78363 2273 aa5.77□□□□□ -1.49
ZNF540-206ENST00000589117 NPFFO15130 113 aa5.76□□□□□ -1.49
ZNF540-206ENST00000589117 HOXA3O43365 443 aaPredicted RBP5.76□□□□□ -1.49
ZNF540-206ENST00000589117 RHOGP84095 191 aa5.76□□□□□ -1.49
ZNF540-206ENST00000589117 DGAT2L7PQ6IED9 249 aa5.76□□□□□ -1.49
ZNF540-206ENST00000589117 FA2HQ7L5A8 372 aa5.76□□□□□ -1.49
ZNF540-206ENST00000589117 GATD1Q8NB37 220 aa5.76□□□□□ -1.49
ZNF540-206ENST00000589117 ATP6V0BQ99437 205 aa5.76□□□□□ -1.49
ZNF540-206ENST00000589117 C2orf70A6NJV1 201 aa5.76□□□□□ -1.49
ZNF540-206ENST00000589117 APOHP02749 345 aaPredicted RBP5.76□□□□□ -1.49
ZNF540-206ENST00000589117 CLEC3BP05452 202 aa5.76□□□□□ -1.49
ZNF540-206ENST00000589117 ARMS2P0C7Q2 107 aa5.76□□□□□ -1.49
ZNF540-206ENST00000589117 RNF224P0DH78 156 aa5.76□□□□□ -1.49
ZNF540-206ENST00000589117 EGR2P11161 476 aaPredicted RBP5.76□□□□□ -1.49
ZNF540-206ENST00000589117 LY6DQ14210 128 aa5.76□□□□□ -1.49
ZNF540-206ENST00000589117 ECSCRQ19T08 205 aa5.76□□□□□ -1.49
ZNF540-206ENST00000589117 KLK9Q2XQG4 91 aa5.76□□□□□ -1.49
ZNF540-206ENST00000589117 EBLN2Q6P2I7 272 aa5.76□□□□□ -1.49
ZNF540-206ENST00000589117 ZNF493Q6ZR52 646 aa5.76□□□□□ -1.49
ZNF540-206ENST00000589117 ZNF502Q8TBZ5 544 aa5.76□□□□□ -1.49
ZNF540-206ENST00000589117 PRR25Q96S07 402 aa5.76□□□□□ -1.49
ZNF540-206ENST00000589117 SLC50A1Q9BRV3 221 aa5.76□□□□□ -1.49
ZNF540-206ENST00000589117 BPESC1Q9GZL8 116 aa5.76□□□□□ -1.49
ZNF540-206ENST00000589117 CLEC5AQ9NY25 188 aa5.76□□□□□ -1.49
ZNF540-206ENST00000589117 KLK9Q9UKQ9 250 aa5.76□□□□□ -1.49
ZNF540-206ENST00000589117 IGHV1-24A0A0C4DH33 117 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 FABP5P3A8MUU1 101 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 SYS1-DBNDD2H3BUS1 97 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 IGHV3-23P01764 117 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 GPR183P32249 361 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 LMO4P61968 165 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 BATFQ16520 125 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 GAGE13Q4V321 117 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 PET117Q6UWS5 81 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 OR10AG1Q8NH19 301 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 ITLN2Q8WWU7 325 aaPredicted RBP5.75□□□□□ -1.49
ZNF540-206ENST00000589117 METTL26Q96S19 204 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 MRPS16Q9Y3D3 137 aaKnown RBP5.75□□□□□ -1.49
ZNF540-206ENST00000589117 ABCA1O95477 2261 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 CENPVL3A0A0U1RRI6 287 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 RBAKDNA6NC62 111 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 OR4C46A6NHA9 309 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 ATP6V0E1O15342 81 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 SH2D1AO60880 128 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 NDUFS7O75251 213 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 CRIP1P50238 77 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 LCN12Q6JVE5 192 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 ORMDL3Q8N138 153 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 PRORYQ9H606 182 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 ST20Q9HBF5 79 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 RNF114Q9Y508 228 aa5.75□□□□□ -1.49
ZNF540-206ENST00000589117 DCHS1Q96JQ0 3298 aa5.74□□□□□ -1.49
ZNF540-206ENST00000589117 A0A087X0K7 114 aa5.74□□□□□ -1.49
ZNF540-206ENST00000589117 B5MCH6 92 aa5.74□□□□□ -1.49
ZNF540-206ENST00000589117 ATP5G2Q06055 141 aa5.74□□□□□ -1.49
ZNF540-206ENST00000589117 LYZL1Q6UWQ5 148 aa5.74□□□□□ -1.49
ZNF540-206ENST00000589117 ATOH7Q8N100 152 aa5.74□□□□□ -1.49
ZNF540-206ENST00000589117 FER1L6-AS1Q8NA97 138 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms