RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 RPEL1Q2QD12 228 aa8.02□□□□□ -1.12
RFFL-212ENST00000584655 VWC2Q2TAL6 325 aa8.02□□□□□ -1.12
RFFL-212ENST00000584655 RNASEKQ6P5S7 137 aaKnown RBP8.02□□□□□ -1.12
RFFL-212ENST00000584655 C16orf92Q96LL3 132 aa8.02□□□□□ -1.12
RFFL-212ENST00000584655 VGLL1Q99990 258 aa8.02□□□□□ -1.12
RFFL-212ENST00000584655 RNF24Q9Y225 148 aa8.02□□□□□ -1.12
RFFL-212ENST00000584655 SELENOTP62341 195 aa8.02□□□□□ -1.13
RFFL-212ENST00000584655 RELQ04864 619 aaPredicted RBP8.02□□□□□ -1.13
RFFL-212ENST00000584655 KIR3DS1Q14943 382 aa8.02□□□□□ -1.13
RFFL-212ENST00000584655 TDRG1Q3Y452 100 aa8.02□□□□□ -1.13
RFFL-212ENST00000584655 NUDT10Q8NFP7 164 aa8.02□□□□□ -1.13
RFFL-212ENST00000584655 NUDT11Q96G61 164 aa8.02□□□□□ -1.13
RFFL-212ENST00000584655 MRPL18Q9H0U6 180 aaKnown RBP8.02□□□□□ -1.13
RFFL-212ENST00000584655 ZNF253O75346 499 aa8.02□□□□□ -1.13
RFFL-212ENST00000584655 PRM2P04554 102 aa8.02□□□□□ -1.13
RFFL-212ENST00000584655 IGF1P05019 195 aa8.02□□□□□ -1.13
RFFL-212ENST00000584655 JOSD1Q15040 202 aaPredicted RBP8.02□□□□□ -1.13
RFFL-212ENST00000584655 TENM1Q9UKZ4 2725 aa8.02□□□□□ -1.13
RFFL-212ENST00000584655 CTSGP08311 255 aa8.01□□□□□ -1.13
RFFL-212ENST00000584655 SYNJ2BPP57105 145 aa8.01□□□□□ -1.13
RFFL-212ENST00000584655 TMEM249Q2WGJ8 235 aa8.01□□□□□ -1.13
RFFL-212ENST00000584655 SMKR1H3BMG3 65 aa8.01□□□□□ -1.13
RFFL-212ENST00000584655 RPLP1P05386 114 aaKnown RBP8.01□□□□□ -1.13
RFFL-212ENST00000584655 ZNF688P0C7X2 276 aa8.01□□□□□ -1.13
RFFL-212ENST00000584655 CSN1S1P47710 185 aa8.01□□□□□ -1.13
RFFL-212ENST00000584655 C8orf46Q8TAG6 207 aa8.01□□□□□ -1.13
RFFL-212ENST00000584655 DPF1Q92782 380 aa8.01□□□□□ -1.13
RFFL-212ENST00000584655 UFC1Q9Y3C8 167 aa8.01□□□□□ -1.13
RFFL-212ENST00000584655 A0A087WWC5 75 aa8.01□□□□□ -1.13
RFFL-212ENST00000584655 GOSR1O95249 250 aa8.01□□□□□ -1.13
RFFL-212ENST00000584655 CT45A10P0DMU9 189 aa8.01□□□□□ -1.13
RFFL-212ENST00000584655 ZNF738Q8NE65 137 aa8.01□□□□□ -1.13
RFFL-212ENST00000584655 GCGP01275 180 aa8□□□□□ -1.13
RFFL-212ENST00000584655 Q6ZVH6 145 aa8□□□□□ -1.13
RFFL-212ENST00000584655 OR4X2Q8NGF9 303 aa8□□□□□ -1.13
RFFL-212ENST00000584655 HIST1H1AQ02539 215 aaPredicted RBP8□□□□□ -1.13
RFFL-212ENST00000584655 ANAPC16Q96DE5 110 aa8□□□□□ -1.13
RFFL-212ENST00000584655 PPP1R14DQ9NXH3 145 aa8□□□□□ -1.13
RFFL-212ENST00000584655 SERF1AO75920 110 aa8□□□□□ -1.13
RFFL-212ENST00000584655 NCR2O95944 276 aa8□□□□□ -1.13
RFFL-212ENST00000584655 HINT1P49773 126 aaPredicted RBP8□□□□□ -1.13
RFFL-212ENST00000584655 Q6ZN92 141 aa8□□□□□ -1.13
RFFL-212ENST00000584655 NDUFAF3Q9BU61 184 aa8□□□□□ -1.13
RFFL-212ENST00000584655 SNHG12Q9BXW3 62 aa8□□□□□ -1.13
RFFL-212ENST00000584655 ODF3BA8MYP8 253 aa8□□□□□ -1.13
RFFL-212ENST00000584655 CHEK1O14757 476 aa8□□□□□ -1.13
RFFL-212ENST00000584655 EGR2P11161 476 aaPredicted RBP8□□□□□ -1.13
RFFL-212ENST00000584655 NCOR1P1Q9H4R4 102 aa8□□□□□ -1.13
RFFL-212ENST00000584655 TCRAP04437 139 aa7.99□□□□□ -1.13
RFFL-212ENST00000584655 PFN1P07737 140 aaKnown RBP7.99□□□□□ -1.13
RFFL-212ENST00000584655 TMEM116Q8NCL8 245 aa7.99□□□□□ -1.13
RFFL-212ENST00000584655 ARL2-SNX15V9GYD0 113 aa7.99□□□□□ -1.13
RFFL-212ENST00000584655 MOB4Q9Y3A3 225 aa7.99□□□□□ -1.13
RFFL-212ENST00000584655 GOLT1BQ9Y3E0 138 aa7.99□□□□□ -1.13
RFFL-212ENST00000584655 A8MWP6 167 aa7.99□□□□□ -1.13
RFFL-212ENST00000584655 CRYGBP07316 175 aa7.99□□□□□ -1.13
RFFL-212ENST00000584655 TMEM30BQ3MIR4 351 aa7.99□□□□□ -1.13
RFFL-212ENST00000584655 BORCS7Q96B45 105 aa7.99□□□□□ -1.13
RFFL-212ENST00000584655 TRAV12-2A0A075B6T6 113 aa7.98□□□□□ -1.13
RFFL-212ENST00000584655 S100A7P31151 101 aa7.98□□□□□ -1.13
RFFL-212ENST00000584655 PDZD2O15018 2839 aa7.98□□□□□ -1.13
RFFL-212ENST00000584655 BMPR1BO00238 502 aa7.98□□□□□ -1.13
RFFL-212ENST00000584655 C5orf56Q8N8D9 126 aa7.98□□□□□ -1.13
RFFL-212ENST00000584655 TRBV24-1A0A075B6N3 115 aa7.98□□□□□ -1.13
RFFL-212ENST00000584655 DIRC3C9JPN6 131 aa7.98□□□□□ -1.13
RFFL-212ENST00000584655 HSBP1O75506 76 aa7.98□□□□□ -1.13
RFFL-212ENST00000584655 PAX1P15863 534 aa7.98□□□□□ -1.13
RFFL-212ENST00000584655 HNRNPA3P51991 378 aaKnown RBP7.98□□□□□ -1.13
RFFL-212ENST00000584655 PAX8Q06710 450 aa7.98□□□□□ -1.13
RFFL-212ENST00000584655 LCN12Q6JVE5 192 aa7.98□□□□□ -1.13
RFFL-212ENST00000584655 CCDC140Q96MF4 163 aa7.98□□□□□ -1.13
RFFL-212ENST00000584655 METTL26Q96S19 204 aa7.98□□□□□ -1.13
RFFL-212ENST00000584655 RNF2Q99496 336 aa7.98□□□□□ -1.13
RFFL-212ENST00000584655 TRGV9Q99603 122 aa7.98□□□□□ -1.13
RFFL-212ENST00000584655 IGLV11-55A0A075B6I3 123 aa7.97□□□□□ -1.13
RFFL-212ENST00000584655 TMEM213A2RRL7 107 aa7.97□□□□□ -1.13
RFFL-212ENST00000584655 NPSP0C0P6 89 aa7.97□□□□□ -1.13
RFFL-212ENST00000584655 HIST1H1EP10412 219 aaKnown RBP7.97□□□□□ -1.13
RFFL-212ENST00000584655 EVI2AP22794 236 aa7.97□□□□□ -1.13
RFFL-212ENST00000584655 MSRB1Q9NZV6 116 aa7.97□□□□□ -1.13
RFFL-212ENST00000584655 M0R381 172 aa7.97□□□□□ -1.13
RFFL-212ENST00000584655 MINOS1Q5TGZ0 78 aa7.97□□□□□ -1.13
RFFL-212ENST00000584655 FAM71F2Q6NXP2 309 aa7.97□□□□□ -1.13
RFFL-212ENST00000584655 PSG8Q9UQ74 426 aa7.97□□□□□ -1.13
RFFL-212ENST00000584655 MINOS1-NBL1R4GNA1 71 aa7.97□□□□□ -1.13
RFFL-212ENST00000584655 EEF1AKMT3Q96AZ1 226 aa7.97□□□□□ -1.13
RFFL-212ENST00000584655 SLAQ13239 276 aa7.96□□□□□ -1.13
RFFL-212ENST00000584655 TMEM183BQ1AE95 376 aa7.96□□□□□ -1.13
RFFL-212ENST00000584655 LINC01356Q8N9X3 169 aa7.96□□□□□ -1.13
RFFL-212ENST00000584655 ZC2HC1AQ96GY0 325 aa7.96□□□□□ -1.13
RFFL-212ENST00000584655 RCHY1Q96PM5 261 aa7.96□□□□□ -1.13
RFFL-212ENST00000584655 SNAI2O43623 268 aa7.96□□□□□ -1.14
RFFL-212ENST00000584655 S100A4P26447 101 aaKnown RBP7.96□□□□□ -1.14
RFFL-212ENST00000584655 VAMP3Q15836 100 aa7.96□□□□□ -1.14
RFFL-212ENST00000584655 DEFB113Q30KQ7 82 aa7.96□□□□□ -1.14
RFFL-212ENST00000584655 NSUN5P1Q3KNT7 163 aa7.96□□□□□ -1.14
RFFL-212ENST00000584655 C5orf17Q8NAS9 161 aa7.96□□□□□ -1.14
RFFL-212ENST00000584655 NUP35Q8NFH5 326 aa7.96□□□□□ -1.14
RFFL-212ENST00000584655 PIFOQ8TCI5 191 aa7.96□□□□□ -1.14
RFFL-212ENST00000584655 CBY3A6NI87 242 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms