RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 A0A096LNJ9 63 aa10.73□□□□□ -0.69
RNF43-205ENST00000581868 SMKR1H3BMG3 65 aa10.73□□□□□ -0.69
RNF43-205ENST00000581868 K7EP13 123 aa10.73□□□□□ -0.69
RNF43-205ENST00000581868 COX8AP10176 69 aa10.73□□□□□ -0.69
RNF43-205ENST00000581868 COTL1Q14019 142 aa10.73□□□□□ -0.69
RNF43-205ENST00000581868 Q8TAT8 98 aa10.73□□□□□ -0.69
RNF43-205ENST00000581868 CFHR4Q92496 578 aa10.73□□□□□ -0.69
RNF43-205ENST00000581868 FANCD2OSQ96PS1 177 aa10.73□□□□□ -0.69
RNF43-205ENST00000581868 RAB1BQ9H0U4 201 aa10.73□□□□□ -0.69
RNF43-205ENST00000581868 NHLH1Q02575 133 aa10.72□□□□□ -0.69
RNF43-205ENST00000581868 FAM104BQ5XKR9 115 aa10.72□□□□□ -0.69
RNF43-205ENST00000581868 ZNF493Q6ZR52 646 aa10.72□□□□□ -0.69
RNF43-205ENST00000581868 SVIPQ8NHG7 77 aa10.72□□□□□ -0.69
RNF43-205ENST00000581868 IGHV3-35A0A0C4DH35 117 aa10.72□□□□□ -0.69
RNF43-205ENST00000581868 C5orf64Q2M2E5 130 aa10.72□□□□□ -0.69
RNF43-205ENST00000581868 C2orf91Q6ZV80 131 aa10.72□□□□□ -0.69
RNF43-205ENST00000581868 NPIPB5A8MRT5 1133 aa10.71□□□□□ -0.69
RNF43-205ENST00000581868 MRPL51Q4U2R6 128 aaKnown RBP10.71□□□□□ -0.69
RNF43-205ENST00000581868 ORMDL3Q8N138 153 aa10.71□□□□□ -0.69
RNF43-205ENST00000581868 TLN1Q9Y490 2541 aaKnown RBP10.71□□□□□ -0.69
RNF43-205ENST00000581868 IGLV11-55A0A075B6I3 123 aa10.71□□□□□ -0.69
RNF43-205ENST00000581868 HLA-DMBP28068 263 aa10.71□□□□□ -0.69
RNF43-205ENST00000581868 UQCRFS1P47985 274 aa10.71□□□□□ -0.69
RNF43-205ENST00000581868 RHOGP84095 191 aa10.71□□□□□ -0.69
RNF43-205ENST00000581868 NDPQ00604 133 aa10.71□□□□□ -0.69
RNF43-205ENST00000581868 PDE6HQ13956 83 aa10.71□□□□□ -0.69
RNF43-205ENST00000581868 TWIST1Q15672 202 aa10.71□□□□□ -0.69
RNF43-205ENST00000581868 S100A7AQ86SG5 101 aa10.71□□□□□ -0.69
RNF43-205ENST00000581868 C21orf62Q9NYP8 219 aa10.71□□□□□ -0.69
RNF43-205ENST00000581868 F8W735 103 aaPredicted RBP10.71□□□□□ -0.7
RNF43-205ENST00000581868 CD5LO43866 347 aa10.71□□□□□ -0.7
RNF43-205ENST00000581868 NDUFA3O95167 84 aa10.71□□□□□ -0.7
RNF43-205ENST00000581868 EGR2P11161 476 aaPredicted RBP10.71□□□□□ -0.7
RNF43-205ENST00000581868 CEACAM3P40198 252 aa10.71□□□□□ -0.7
RNF43-205ENST00000581868 CACNG7P62955 275 aa10.71□□□□□ -0.7
RNF43-205ENST00000581868 PSG9Q00887 426 aa10.71□□□□□ -0.7
RNF43-205ENST00000581868 WFDC3Q8IUB2 231 aa10.71□□□□□ -0.7
RNF43-205ENST00000581868 PIP4P2Q8N4L2 257 aa10.71□□□□□ -0.7
RNF43-205ENST00000581868 LY6G5BQ8NDX9 201 aa10.71□□□□□ -0.7
RNF43-205ENST00000581868 NPBQ8NG41 125 aa10.71□□□□□ -0.7
RNF43-205ENST00000581868 ARPC1AQ92747 370 aa10.71□□□□□ -0.7
RNF43-205ENST00000581868 PTPRZ1P23471 2315 aaPredicted RBP10.7□□□□□ -0.7
RNF43-205ENST00000581868 CKS2P33552 79 aa10.7□□□□□ -0.7
RNF43-205ENST00000581868 ZNF80P51504 273 aaPredicted RBP10.7□□□□□ -0.7
RNF43-205ENST00000581868 OR11H6Q8NGC7 330 aa10.7□□□□□ -0.7
RNF43-205ENST00000581868 PRR25Q96S07 402 aa10.7□□□□□ -0.7
RNF43-205ENST00000581868 VGLL1Q99990 258 aa10.7□□□□□ -0.7
RNF43-205ENST00000581868 ANKHD1Q8IWZ3 2542 aaKnown RBP10.7□□□□□ -0.7
RNF43-205ENST00000581868 VKORC1Q9BQB6 163 aa10.7□□□□□ -0.7
RNF43-205ENST00000581868 TRAV8-6A0A0B4J262 113 aa10.69□□□□□ -0.7
RNF43-205ENST00000581868 U3KQK5 164 aa10.69□□□□□ -0.7
RNF43-205ENST00000581868 NPYP01303 97 aa10.69□□□□□ -0.7
RNF43-205ENST00000581868 RPL7P18124 248 aaKnown RBP10.69□□□□□ -0.7
RNF43-205ENST00000581868 TMEM97Q5BJF2 176 aa10.69□□□□□ -0.7
RNF43-205ENST00000581868 SAPCD1Q5SSQ6 148 aa10.69□□□□□ -0.7
RNF43-205ENST00000581868 ZNF562Q6V9R5 426 aa10.69□□□□□ -0.7
RNF43-205ENST00000581868 DYNAPQ8N1N2 210 aa10.69□□□□□ -0.7
RNF43-205ENST00000581868 FER1L6-AS1Q8NA97 138 aa10.69□□□□□ -0.7
RNF43-205ENST00000581868 TMEM190Q8WZ59 177 aa10.69□□□□□ -0.7
RNF43-205ENST00000581868 CEP295Q9C0D2 2601 aa10.68□□□□□ -0.7
RNF43-205ENST00000581868 C7orf71A4D174 169 aa10.68□□□□□ -0.7
RNF43-205ENST00000581868 TCF15Q12870 199 aa10.68□□□□□ -0.7
RNF43-205ENST00000581868 MSRB1Q9NZV6 116 aa10.68□□□□□ -0.7
RNF43-205ENST00000581868 RABAC1Q9UI14 185 aa10.68□□□□□ -0.7
RNF43-205ENST00000581868 HBDP02042 147 aa10.68□□□□□ -0.7
RNF43-205ENST00000581868 ORM1P02763 201 aa10.68□□□□□ -0.7
RNF43-205ENST00000581868 SMAD5-AS1Q9Y6J3 95 aa10.68□□□□□ -0.7
RNF43-205ENST00000581868 WNK2Q9Y3S1 2297 aa10.67□□□□□ -0.7
RNF43-205ENST00000581868 SPTA1P02549 2419 aa10.67□□□□□ -0.7
RNF43-205ENST00000581868 FGF6P10767 208 aa10.67□□□□□ -0.7
RNF43-205ENST00000581868 CDKN1BP46527 198 aa10.67□□□□□ -0.7
RNF43-205ENST00000581868 SELENOKQ9Y6D0 94 aa10.67□□□□□ -0.7
RNF43-205ENST00000581868 SVEP1Q4LDE5 3571 aa10.67□□□□□ -0.7
RNF43-205ENST00000581868 CTSGP08311 255 aa10.67□□□□□ -0.7
RNF43-205ENST00000581868 TTC9CQ8N5M4 171 aa10.67□□□□□ -0.7
RNF43-205ENST00000581868 TIMD4Q96H15 378 aa10.67□□□□□ -0.7
RNF43-205ENST00000581868 C18orf15Q96N68 181 aa10.67□□□□□ -0.7
RNF43-205ENST00000581868 CST9LQ9H4G1 147 aa10.67□□□□□ -0.7
RNF43-205ENST00000581868 THYN1Q9P016 225 aa10.67□□□□□ -0.7
RNF43-205ENST00000581868 NBASA2RRP1 2371 aa10.66□□□□□ -0.7
RNF43-205ENST00000581868 ERCC8Q13216 396 aa10.66□□□□□ -0.7
RNF43-205ENST00000581868 LGALS9BQ3B8N2 356 aa10.66□□□□□ -0.7
RNF43-205ENST00000581868 LGALS9CQ6DKI2 356 aa10.66□□□□□ -0.7
RNF43-205ENST00000581868 IFI27L1Q96BM0 104 aa10.66□□□□□ -0.7
RNF43-205ENST00000581868 PEF1Q9UBV8 284 aaKnown RBP10.66□□□□□ -0.7
RNF43-205ENST00000581868 MED13LQ71F56 2210 aa10.66□□□□□ -0.7
RNF43-205ENST00000581868 ODF3BA8MYP8 253 aa10.66□□□□□ -0.7
RNF43-205ENST00000581868 PRTN3P24158 256 aa10.66□□□□□ -0.7
RNF43-205ENST00000581868 PPIFP30405 207 aaKnown RBP10.66□□□□□ -0.7
RNF43-205ENST00000581868 ASH1LQ9NR48 2969 aaKnown RBP10.66□□□□□ -0.7
RNF43-205ENST00000581868 GAS8-AS1O95177 125 aa10.65□□□□□ -0.7
RNF43-205ENST00000581868 IGHG4P01861 327 aa10.65□□□□□ -0.7
RNF43-205ENST00000581868 BMI1P35226 326 aa10.65□□□□□ -0.7
RNF43-205ENST00000581868 NMUP48645 174 aa10.65□□□□□ -0.7
RNF43-205ENST00000581868 PRSS57Q6UWY2 283 aa10.65□□□□□ -0.7
RNF43-205ENST00000581868 NAA38Q9BRA0 125 aaKnown RBP10.65□□□□□ -0.7
RNF43-205ENST00000581868 VMO1Q7Z5L0 202 aa10.65□□□□□ -0.71
RNF43-205ENST00000581868 ZNF48Q96MX3 618 aaPredicted RBP10.65□□□□□ -0.71
RNF43-205ENST00000581868 DKK2Q9UBU2 259 aa10.65□□□□□ -0.71
RNF43-205ENST00000581868 IGHV3-66A0A0C4DH42 116 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms