RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 PAFAH1B2P68402 229 aa18.28■□□□□ 0.52
NPLOC4-217ENST00000574897 Q8TAT8 98 aa18.28■□□□□ 0.52
NPLOC4-217ENST00000574897 A0A1W2PS18 150 aa18.27■□□□□ 0.52
NPLOC4-217ENST00000574897 PTPN13Q12923 2485 aa18.27■□□□□ 0.52
NPLOC4-217ENST00000574897 PMCHP20382 165 aa18.27■□□□□ 0.52
NPLOC4-217ENST00000574897 CSN1S1P47710 185 aa18.27■□□□□ 0.52
NPLOC4-217ENST00000574897 MAPK1IP1LQ8NDC0 245 aa18.27■□□□□ 0.52
NPLOC4-217ENST00000574897 VGLL1Q99990 258 aa18.27■□□□□ 0.52
NPLOC4-217ENST00000574897 GFRA4Q9GZZ7 299 aa18.27■□□□□ 0.52
NPLOC4-217ENST00000574897 GPX1P07203 203 aa18.26■□□□□ 0.51
NPLOC4-217ENST00000574897 ATP5G2Q06055 141 aa18.26■□□□□ 0.51
NPLOC4-217ENST00000574897 ZNF843Q8N446 348 aa18.26■□□□□ 0.51
NPLOC4-217ENST00000574897 ABCA12Q86UK0 2595 aa18.26■□□□□ 0.51
NPLOC4-217ENST00000574897 BLCAPP62952 87 aa18.26■□□□□ 0.51
NPLOC4-217ENST00000574897 FAM19A2Q8N3H0 131 aa18.26■□□□□ 0.51
NPLOC4-217ENST00000574897 OR4B1Q8NGF8 309 aa18.26■□□□□ 0.51
NPLOC4-217ENST00000574897 KCNS1Q96KK3 526 aa18.26■□□□□ 0.51
NPLOC4-217ENST00000574897 ALKBH7Q9BT30 221 aaPredicted RBP18.26■□□□□ 0.51
NPLOC4-217ENST00000574897 NAGKQ9UJ70 344 aa18.26■□□□□ 0.51
NPLOC4-217ENST00000574897 TRGV3P03979 118 aa18.25■□□□□ 0.51
NPLOC4-217ENST00000574897 RNF182Q8N6D2 247 aa18.25■□□□□ 0.51
NPLOC4-217ENST00000574897 TRBV7-1A0A0A6YYK4 115 aa18.25■□□□□ 0.51
NPLOC4-217ENST00000574897 A6NDX4 124 aa18.25■□□□□ 0.51
NPLOC4-217ENST00000574897 AMTP48728 403 aa18.25■□□□□ 0.51
NPLOC4-217ENST00000574897 B4DSR2 109 aa18.24■□□□□ 0.51
NPLOC4-217ENST00000574897 TSTD3H0UI37 97 aa18.24■□□□□ 0.51
NPLOC4-217ENST00000574897 TRBV12-3P01733 135 aa18.24■□□□□ 0.51
NPLOC4-217ENST00000574897 A8MWP6 167 aa18.24■□□□□ 0.51
NPLOC4-217ENST00000574897 FOXA3P55318 350 aaPredicted RBP18.24■□□□□ 0.51
NPLOC4-217ENST00000574897 SIGLECL1Q8N7X8 197 aa18.24■□□□□ 0.51
NPLOC4-217ENST00000574897 TMSB15BA0A087X1C1 80 aa18.23■□□□□ 0.51
NPLOC4-217ENST00000574897 PRAC2D3DTV9 90 aa18.23■□□□□ 0.51
NPLOC4-217ENST00000574897 RELQ04864 619 aaPredicted RBP18.23■□□□□ 0.51
NPLOC4-217ENST00000574897 ARMS2P0C7Q2 107 aa18.23■□□□□ 0.51
NPLOC4-217ENST00000574897 CRIP2P52943 208 aaPredicted RBP18.23■□□□□ 0.51
NPLOC4-217ENST00000574897 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.23■□□□□ 0.51
NPLOC4-217ENST00000574897 LCNL1Q6ZST4 164 aa18.23■□□□□ 0.51
NPLOC4-217ENST00000574897 FAM231BA6NCW3 169 aa18.22■□□□□ 0.51
NPLOC4-217ENST00000574897 ZNF705DP0CH99 300 aaPredicted RBP18.22■□□□□ 0.51
NPLOC4-217ENST00000574897 ZNF705BP0CI00 300 aaPredicted RBP18.22■□□□□ 0.51
NPLOC4-217ENST00000574897 DDTP30046 118 aa18.22■□□□□ 0.51
NPLOC4-217ENST00000574897 TMEM190Q8WZ59 177 aa18.22■□□□□ 0.51
NPLOC4-217ENST00000574897 TPPP3Q9BW30 176 aa18.22■□□□□ 0.51
NPLOC4-217ENST00000574897 LCN12Q6JVE5 192 aa18.22■□□□□ 0.51
NPLOC4-217ENST00000574897 PRR25Q96S07 402 aa18.22■□□□□ 0.51
NPLOC4-217ENST00000574897 NRN1Q9NPD7 142 aa18.22■□□□□ 0.51
NPLOC4-217ENST00000574897 ZNF324O75467 553 aaPredicted RBP18.21■□□□□ 0.51
NPLOC4-217ENST00000574897 CT45A10P0DMU9 189 aa18.21■□□□□ 0.51
NPLOC4-217ENST00000574897 NTF3P20783 257 aa18.21■□□□□ 0.51
NPLOC4-217ENST00000574897 ERCC8Q13216 396 aa18.21■□□□□ 0.51
NPLOC4-217ENST00000574897 M0QZ24 198 aa18.2■□□□□ 0.5
NPLOC4-217ENST00000574897 SH2D1AO60880 128 aa18.2■□□□□ 0.5
NPLOC4-217ENST00000574897 COX6B1P14854 86 aa18.2■□□□□ 0.5
NPLOC4-217ENST00000574897 ZNF80P51504 273 aaPredicted RBP18.2■□□□□ 0.5
NPLOC4-217ENST00000574897 SSTP61278 116 aa18.2■□□□□ 0.5
NPLOC4-217ENST00000574897 TDRG1Q3Y452 100 aa18.2■□□□□ 0.5
NPLOC4-217ENST00000574897 FAM209BQ5JX69 171 aa18.2■□□□□ 0.5
NPLOC4-217ENST00000574897 KLK15Q9H2R5 256 aa18.2■□□□□ 0.5
NPLOC4-217ENST00000574897 IGHG2P01859 326 aa18.2■□□□□ 0.5
NPLOC4-217ENST00000574897 IGF1P05019 195 aa18.2■□□□□ 0.5
NPLOC4-217ENST00000574897 IGHV3-11P01762 117 aa18.19■□□□□ 0.5
NPLOC4-217ENST00000574897 PPIFP30405 207 aaKnown RBP18.19■□□□□ 0.5
NPLOC4-217ENST00000574897 KRTAP10-9P60411 292 aa18.19■□□□□ 0.5
NPLOC4-217ENST00000574897 KRTDAPP60985 99 aa18.19■□□□□ 0.5
NPLOC4-217ENST00000574897 NIT1Q86X76 327 aa18.19■□□□□ 0.5
NPLOC4-217ENST00000574897 SERTM2A0A1B0GWG4 89 aa18.19■□□□□ 0.5
NPLOC4-217ENST00000574897 FAM223BA6NKX1 122 aa18.19■□□□□ 0.5
NPLOC4-217ENST00000574897 KLF5Q13887 457 aaPredicted RBP18.19■□□□□ 0.5
NPLOC4-217ENST00000574897 FAM223AQ8IWN6 122 aa18.19■□□□□ 0.5
NPLOC4-217ENST00000574897 METTL26Q96S19 204 aa18.19■□□□□ 0.5
NPLOC4-217ENST00000574897 A0A096LNT2 108 aa18.18■□□□□ 0.5
NPLOC4-217ENST00000574897 HAX1O00165 279 aa18.18■□□□□ 0.5
NPLOC4-217ENST00000574897 URB1-AS1Q96HZ7 61 aa18.18■□□□□ 0.5
NPLOC4-217ENST00000574897 CR1P17927 2039 aa18.18■□□□□ 0.5
NPLOC4-217ENST00000574897 A0A087X0K7 114 aa18.18■□□□□ 0.5
NPLOC4-217ENST00000574897 ARL3P36405 182 aa18.18■□□□□ 0.5
NPLOC4-217ENST00000574897 DEFA6Q01524 100 aa18.18■□□□□ 0.5
NPLOC4-217ENST00000574897 UNQ9165/PRO28630Q6UXU0 137 aa18.18■□□□□ 0.5
NPLOC4-217ENST00000574897 A0A1B0GUT8 65 aa18.17■□□□□ 0.5
NPLOC4-217ENST00000574897 RNASEKQ6P5S7 137 aaKnown RBP18.17■□□□□ 0.5
NPLOC4-217ENST00000574897 C14orf144Q96I85 54 aa18.17■□□□□ 0.5
NPLOC4-217ENST00000574897 DSCR9P59020 149 aa18.17■□□□□ 0.5
NPLOC4-217ENST00000574897 TMEM95Q3KNT9 176 aa18.17■□□□□ 0.5
NPLOC4-217ENST00000574897 MUC21A0A0G2JKD1 596 aa18.16■□□□□ 0.5
NPLOC4-217ENST00000574897 MUC21A0A140T8X8 626 aa18.16■□□□□ 0.5
NPLOC4-217ENST00000574897 S100A7P31151 101 aa18.16■□□□□ 0.5
NPLOC4-217ENST00000574897 MUC21Q5SSG8 566 aa18.16■□□□□ 0.5
NPLOC4-217ENST00000574897 TRAV8-2A0A0B4J237 113 aa18.16■□□□□ 0.5
NPLOC4-217ENST00000574897 PF4V1P10720 104 aa18.16■□□□□ 0.5
NPLOC4-217ENST00000574897 SLC25A16P16260 332 aa18.16■□□□□ 0.5
NPLOC4-217ENST00000574897 RAB9AP51151 201 aa18.16■□□□□ 0.5
NPLOC4-217ENST00000574897 FAM162BQ5T6X4 162 aa18.16■□□□□ 0.5
NPLOC4-217ENST00000574897 Q8N976 141 aa18.16■□□□□ 0.5
NPLOC4-217ENST00000574897 U3KQE9 123 aa18.16■□□□□ 0.5
NPLOC4-217ENST00000574897 LOC102724200A0A096LPH7 203 aaPredicted RBP18.15■□□□□ 0.5
NPLOC4-217ENST00000574897 TMEM189A5PLL7 270 aa18.15■□□□□ 0.5
NPLOC4-217ENST00000574897 DOPEY2Q9Y3R5 2298 aa18.15■□□□□ 0.5
NPLOC4-217ENST00000574897 SAPCD1Q5SSQ6 148 aa18.15■□□□□ 0.5
NPLOC4-217ENST00000574897 MXRA5Q9NR99 2828 aa18.14■□□□□ 0.49
NPLOC4-217ENST00000574897 IGHV4-59P01825 116 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms