RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 ZNF785A8K8V0 405 aa13.84□□□□□ -0.19
CMTM3-214ENST00000567572 SAA4P35542 130 aa13.84□□□□□ -0.19
CMTM3-214ENST00000567572 WNK2Q9Y3S1 2297 aa13.84□□□□□ -0.19
CMTM3-214ENST00000567572 CRYBG3Q68DQ2 2970 aa13.84□□□□□ -0.19
CMTM3-214ENST00000567572 NCBP2LA6PVI3 153 aaKnown RBP13.84□□□□□ -0.19
CMTM3-214ENST00000567572 LINC00614P0C842 121 aa13.84□□□□□ -0.19
CMTM3-214ENST00000567572 FAM106CPP0CH98 169 aa13.84□□□□□ -0.19
CMTM3-214ENST00000567572 TMEM11P17152 192 aa13.84□□□□□ -0.19
CMTM3-214ENST00000567572 NDPQ00604 133 aa13.84□□□□□ -0.19
CMTM3-214ENST00000567572 FAM120AOSQ5T036 256 aa13.84□□□□□ -0.19
CMTM3-214ENST00000567572 C17orf77Q96MU5 243 aa13.84□□□□□ -0.19
CMTM3-214ENST00000567572 MED13LQ71F56 2210 aa13.83□□□□□ -0.19
CMTM3-214ENST00000567572 NDUFB8O95169 186 aa13.83□□□□□ -0.2
CMTM3-214ENST00000567572 RAB9AP51151 201 aa13.83□□□□□ -0.2
CMTM3-214ENST00000567572 KLF17Q5JT82 389 aaPredicted RBP13.83□□□□□ -0.2
CMTM3-214ENST00000567572 SAPCD1Q5SSQ6 148 aa13.83□□□□□ -0.2
CMTM3-214ENST00000567572 NRGNQ92686 78 aa13.83□□□□□ -0.2
CMTM3-214ENST00000567572 IGHV1-24A0A0C4DH33 117 aa13.82□□□□□ -0.2
CMTM3-214ENST00000567572 NPFFO15130 113 aa13.82□□□□□ -0.2
CMTM3-214ENST00000567572 COL5A1-AS1Q5SY13 56 aa13.82□□□□□ -0.2
CMTM3-214ENST00000567572 ZNF493Q6ZR52 646 aa13.82□□□□□ -0.2
CMTM3-214ENST00000567572 PIP4P2Q8N4L2 257 aa13.82□□□□□ -0.2
CMTM3-214ENST00000567572 CENPVL3A0A0U1RRI6 287 aa13.82□□□□□ -0.2
CMTM3-214ENST00000567572 FAM110DQ8TAY7 271 aaPredicted RBP13.82□□□□□ -0.2
CMTM3-214ENST00000567572 MRPS16Q9Y3D3 137 aaKnown RBP13.82□□□□□ -0.2
CMTM3-214ENST00000567572 IGHV7-81A0A0B4J1V7 117 aa13.81□□□□□ -0.2
CMTM3-214ENST00000567572 A1L4Q6 167 aa13.81□□□□□ -0.2
CMTM3-214ENST00000567572 HNRNPA3P51991 378 aaKnown RBP13.81□□□□□ -0.2
CMTM3-214ENST00000567572 GAGE1Q13065 139 aa13.81□□□□□ -0.2
CMTM3-214ENST00000567572 RABAC1Q9UI14 185 aa13.81□□□□□ -0.2
CMTM3-214ENST00000567572 LRRK2Q5S007 2527 aa13.81□□□□□ -0.2
CMTM3-214ENST00000567572 VPS13CQ709C8 3753 aa13.8□□□□□ -0.2
CMTM3-214ENST00000567572 FBN2P35556 2912 aa13.8□□□□□ -0.2
CMTM3-214ENST00000567572 LEPROTL1O95214 131 aa13.8□□□□□ -0.2
CMTM3-214ENST00000567572 DSCR9P59020 149 aa13.8□□□□□ -0.2
CMTM3-214ENST00000567572 Q8N9W7 124 aa13.8□□□□□ -0.2
CMTM3-214ENST00000567572 CTSGP08311 255 aa13.8□□□□□ -0.2
CMTM3-214ENST00000567572 CRIP1P50238 77 aa13.8□□□□□ -0.2
CMTM3-214ENST00000567572 RPS20P60866 119 aaKnown RBP13.8□□□□□ -0.2
CMTM3-214ENST00000567572 Q6ZN92 141 aa13.8□□□□□ -0.2
CMTM3-214ENST00000567572 HSPB8Q9UJY1 196 aa13.8□□□□□ -0.2
CMTM3-214ENST00000567572 SYS1-DBNDD2H3BUS1 97 aa13.79□□□□□ -0.2
CMTM3-214ENST00000567572 M0R3E3 92 aa13.79□□□□□ -0.2
CMTM3-214ENST00000567572 ARMS2P0C7Q2 107 aa13.79□□□□□ -0.2
CMTM3-214ENST00000567572 EGR2P11161 476 aaPredicted RBP13.79□□□□□ -0.2
CMTM3-214ENST00000567572 SRSF2Q01130 221 aaKnown RBP13.79□□□□□ -0.2
CMTM3-214ENST00000567572 LCN12Q6JVE5 192 aa13.79□□□□□ -0.2
CMTM3-214ENST00000567572 PET117Q6UWS5 81 aa13.79□□□□□ -0.2
CMTM3-214ENST00000567572 CELSR2Q9HCU4 2923 aa13.79□□□□□ -0.2
CMTM3-214ENST00000567572 ANKRD39Q53RE8 183 aa13.78□□□□□ -0.2
CMTM3-214ENST00000567572 ST20Q9HBF5 79 aa13.78□□□□□ -0.2
CMTM3-214ENST00000567572 LAMTOR2Q9Y2Q5 125 aa13.78□□□□□ -0.2
CMTM3-214ENST00000567572 SPG11Q96JI7 2443 aa13.77□□□□□ -0.2
CMTM3-214ENST00000567572 A0A087X0K7 114 aa13.77□□□□□ -0.21
CMTM3-214ENST00000567572 IGHV1-69DA0A0B4J2H0 117 aa13.77□□□□□ -0.21
CMTM3-214ENST00000567572 TMEM189A5PLL7 270 aa13.77□□□□□ -0.21
CMTM3-214ENST00000567572 IGHV1-69P01742 117 aa13.77□□□□□ -0.21
CMTM3-214ENST00000567572 BMI1P35226 326 aa13.77□□□□□ -0.21
CMTM3-214ENST00000567572 TMEM191AQ9H0A3 160 aa13.77□□□□□ -0.21
CMTM3-214ENST00000567572 FAM208BQ5VWN6 2430 aa13.77□□□□□ -0.21
CMTM3-214ENST00000567572 OR2T8A6NH00 312 aa13.76□□□□□ -0.21
CMTM3-214ENST00000567572 MSMBP08118 114 aa13.76□□□□□ -0.21
CMTM3-214ENST00000567572 TSPOP30536 169 aa13.76□□□□□ -0.21
CMTM3-214ENST00000567572 ZNF502Q8TBZ5 544 aa13.76□□□□□ -0.21
CMTM3-214ENST00000567572 ATP6V0BQ99437 205 aa13.76□□□□□ -0.21
CMTM3-214ENST00000567572 MAP1LC3CQ9BXW4 147 aa13.76□□□□□ -0.21
CMTM3-214ENST00000567572 CLEC5AQ9NY25 188 aa13.76□□□□□ -0.21
CMTM3-214ENST00000567572 S4R3C0 116 aa13.76□□□□□ -0.21
CMTM3-214ENST00000567572 OR4C46A6NHA9 309 aa13.76□□□□□ -0.21
CMTM3-214ENST00000567572 PRR25Q96S07 402 aa13.76□□□□□ -0.21
CMTM3-214ENST00000567572 AP5S1Q9NUS5 200 aa13.76□□□□□ -0.21
CMTM3-214ENST00000567572 SVEP1Q4LDE5 3571 aa13.75□□□□□ -0.21
CMTM3-214ENST00000567572 TRAV40A0A0B4J280 105 aa13.75□□□□□ -0.21
CMTM3-214ENST00000567572 SH2D1AO60880 128 aa13.75□□□□□ -0.21
CMTM3-214ENST00000567572 SLC25A16P16260 332 aa13.75□□□□□ -0.21
CMTM3-214ENST00000567572 Q71RC1 249 aaPredicted RBP13.75□□□□□ -0.21
CMTM3-214ENST00000567572 C8orf49Q96NF6 230 aa13.75□□□□□ -0.21
CMTM3-214ENST00000567572 U3KQK5 164 aa13.75□□□□□ -0.21
CMTM3-214ENST00000567572 RBAKDNA6NC62 111 aa13.74□□□□□ -0.21
CMTM3-214ENST00000567572 IGLL1P15814 213 aa13.74□□□□□ -0.21
CMTM3-214ENST00000567572 ZNF25P17030 456 aaPredicted RBP13.74□□□□□ -0.21
CMTM3-214ENST00000567572 SPATA12Q7Z6I5 190 aa13.74□□□□□ -0.21
CMTM3-214ENST00000567572 ATOH7Q8N100 152 aa13.74□□□□□ -0.21
CMTM3-214ENST00000567572 BCL6BQ8N143 479 aaPredicted RBP13.74□□□□□ -0.21
CMTM3-214ENST00000567572 IGHV3OR16-10A0A075B7F0 116 aa13.74□□□□□ -0.21
CMTM3-214ENST00000567572 DLEU1O43261 78 aa13.74□□□□□ -0.21
CMTM3-214ENST00000567572 TMEM208Q9BTX3 173 aa13.74□□□□□ -0.21
CMTM3-214ENST00000567572 A0A096LNT2 108 aa13.73□□□□□ -0.21
CMTM3-214ENST00000567572 B4DSR2 109 aa13.73□□□□□ -0.21
CMTM3-214ENST00000567572 M0QZ24 198 aa13.73□□□□□ -0.21
CMTM3-214ENST00000567572 SLC50A1Q9BRV3 221 aa13.73□□□□□ -0.21
CMTM3-214ENST00000567572 HSBP1L1C9JCN9 74 aa13.72□□□□□ -0.21
CMTM3-214ENST00000567572 BATFQ16520 125 aa13.72□□□□□ -0.21
CMTM3-214ENST00000567572 C15orf32Q32M92 178 aa13.72□□□□□ -0.21
CMTM3-214ENST00000567572 UNQ5815/PRO19632Q6UWF5 114 aa13.72□□□□□ -0.21
CMTM3-214ENST00000567572 BRD3OSQ6XYD6 125 aa13.72□□□□□ -0.21
CMTM3-214ENST00000567572 FA2HQ7L5A8 372 aa13.72□□□□□ -0.21
CMTM3-214ENST00000567572 OR10AG1Q8NH19 301 aa13.72□□□□□ -0.21
CMTM3-214ENST00000567572 TMUB1Q9BVT8 246 aa13.72□□□□□ -0.21
CMTM3-214ENST00000567572 ZFAND3Q9H8U3 227 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 216.6 ms