RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 PRR20AP86496 221 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 CFHR1Q03591 330 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 SLC25A53Q5H9E4 307 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 ABHD12Q8N2K0 398 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 NUP35Q8NFH5 326 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 TMEM54Q969K7 222 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 PRR15LQ9BU68 103 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 APOHP02749 345 aaPredicted RBP2.37□□□□□ -2.03
CHD9-218ENST00000566029 ERCC8Q13216 396 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 TAL2Q16559 108 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 MT-ATP8P03928 68 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 CENPWQ5EE01 88 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 RITA1Q96K30 269 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 OXGR1Q96P68 337 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 C1QTNF5Q9BXJ0 243 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 PRNDQ9UKY0 176 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 TRAV12-2A0A075B6T6 113 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 TCRBV4S1A1TA0A5B7 111 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 PGPA6NDG6 321 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 JMJD7-PLA2G4BH0Y9G9 81 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 SS18L1O75177 396 aaPredicted RBP2.37□□□□□ -2.03
CHD9-218ENST00000566029 HLA-DRB4P13762 266 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 COX7A1P24310 79 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 RBM3P98179 157 aaKnown RBP2.37□□□□□ -2.03
CHD9-218ENST00000566029 ECSCRQ19T08 205 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 IGFBPL1Q8WX77 278 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 HLA-DRB4X5D2U9 266 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 PTPRSQ13332 1948 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 C17orf98A8MV24 154 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.37□□□□□ -2.03
CHD9-218ENST00000566029 M0R135 149 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 IGLV2-14P01704 120 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 CTGFP29279 349 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 C14orf177Q52M58 125 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 TEPPQ6URK8 271 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 FAM168AQ92567 244 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 ZNF799Q96GE5 643 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 F5H768 121 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 VDAC2P45880 294 aaPredicted RBP2.37□□□□□ -2.03
CHD9-218ENST00000566029 C1orf159Q96HA4 380 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 USMG5Q96IX5 58 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 LINC00479Q96M42 142 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 TCF19Q9Y242 345 aa2.37□□□□□ -2.03
CHD9-218ENST00000566029 C16orf97H3BN30 126 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 SCTP09683 121 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 SRSF1Q07955 248 aaKnown RBP eCLIP2.36□□□□□ -2.038e-9■□□□□ 8.9
CHD9-218ENST00000566029 TMEM196Q5HYL7 178 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 DNAL4O96015 105 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 XGP55808 180 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 PLEKHB2Q96CS7 222 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 GGTLC1Q9BX51 225 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 RRN3P1Q2M238 152 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 CARD19Q96LW7 228 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 RPL30P62888 115 aaKnown RBP2.36□□□□□ -2.03
CHD9-218ENST00000566029 WFDC2Q14508 124 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 FAM74A4Q5TZK3 123 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 HRCT1Q6UXD1 115 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 TTC9CQ8N5M4 171 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 KLK15Q9H2R5 256 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 A0A096LNJ9 63 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 NTF4P34130 210 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 PIP4P1Q86T03 277 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 LYPD1Q8N2G4 141 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 GTSF1Q8WW33 167 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 KIR2DL4Q99706 377 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 PCSK5Q92824 1860 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 ATG2AQ2TAZ0 1938 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 TMEM30CPA0ZSE6 113 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 ADARB2-AS1A8MUL3 147 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 SYNGR1O43759 233 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 C11orf71Q6IPW1 123 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 ZNF747Q9BV97 191 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 RNASE7Q9H1E1 156 aaKnown RBP2.36□□□□□ -2.03
CHD9-218ENST00000566029 M0R381 172 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 LINC00694P0DN24 101 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 CFHR2P36980 270 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 GTF3C1Q12789 2109 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 EML6Q6ZMW3 1958 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 A8MWL6 223 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 SP1P08047 785 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 MRPL14Q6P1L8 145 aaKnown RBP2.36□□□□□ -2.03
CHD9-218ENST00000566029 TREML4Q6UXN2 200 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 FDCSPQ8NFU4 85 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 K7ERJ3 54 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 ZG16O60844 167 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 RSPO4Q2I0M5 234 aaPredicted RBP2.36□□□□□ -2.03
CHD9-218ENST00000566029 ZNF876PQ49A33 203 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 SPANXN1Q5VSR9 72 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 NOTCH2NLQ7Z3S9 236 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 TM2D2Q9BX73 214 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 CEP290O15078 2479 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 INTS1Q8N201 2190 aaKnown RBP2.36□□□□□ -2.03
CHD9-218ENST00000566029 SMIM27A0A1W2PRY6 76 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 FAM223BA6NKX1 122 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 IGLV3-19P01714 112 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 LGALS1P09382 135 aaKnown RBP2.36□□□□□ -2.03
CHD9-218ENST00000566029 MINOS1Q5TGZ0 78 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 PDPNQ86YL7 162 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 FAM223AQ8IWN6 122 aa2.36□□□□□ -2.03
CHD9-218ENST00000566029 MINOS1-NBL1R4GNA1 71 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms