RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 SERF1AO75920 110 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 NDUFA7O95182 113 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 MSMBP08118 114 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 PMCHP20382 165 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 NPY1RP25929 384 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 CTRLP40313 264 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 REG1BP48304 166 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 RPL31P62899 125 aaKnown RBP3.18□□□□□ -1.9
LINC00561-201ENST00000565815 MORN2Q502X0 79 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 WDR86Q86TI4 376 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 LRP11Q86VZ4 500 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 TMEM256Q8N2U0 113 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 ARL6IP6Q8N6S5 226 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 OR2V2Q96R30 315 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 V9GYV3 84 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 MED12LQ86YW9 2145 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 NKX6-3A6NJ46 265 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 LINC00869P0C866 280 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 GABRA2P47869 451 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 EDDM3BP56851 147 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 KLF3P57682 345 aaPredicted RBP3.17□□□□□ -1.9
LINC00561-201ENST00000565815 C2orf83Q53S99 150 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 STXBP6Q8NFX7 210 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 OR4P4Q8NGL7 312 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 OR1L8Q8NGR8 309 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 OR4A5Q8NH83 315 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 BORCS7Q96B45 105 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 COQ2Q96H96 371 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 GAL3ST2Q9H3Q3 398 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 ZNF331Q9NQX6 463 aaPredicted RBP3.17□□□□□ -1.9
LINC00561-201ENST00000565815 SLC35D1Q9NTN3 355 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 TMEM14BQ9NUH8 114 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 SLC25A15Q9Y619 301 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 TRBV20OR9-2A0A075B6H5 130 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 TRAV38-1A0A0B4J264 116 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 FAM231BA6NCW3 169 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 OR2J3O76001 311 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 IGKV3-15P01624 115 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 IGHV3-9P01782 118 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 CCL2P13500 99 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 PRTN3P24158 256 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 HNRNPA3P51991 378 aaKnown RBP3.17□□□□□ -1.9
LINC00561-201ENST00000565815 UBE2G2P60604 165 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 KPRPQ5T749 579 aaPredicted RBP3.17□□□□□ -1.9
LINC00561-201ENST00000565815 FAM71F2Q6NXP2 309 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 TMEM136Q6ZRR5 245 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 ABHD12Q8N2K0 398 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 TMEM86BQ8N661 226 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 OR1L4Q8NGR5 311 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 SLC25A40Q8TBP6 338 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 ZNF714Q96N38 554 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 LINC00574Q9H8X3 128 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 BET1LQ9NYM9 111 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 NAT8BQ9UHF3 227 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 TP53TG3Q9ULZ0 132 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 PSG11Q9UQ72 335 aa3.17□□□□□ -1.9
LINC00561-201ENST00000565815 RELNP78509 3460 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 K7EP13 123 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 APCSP02743 223 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 OR5AL1P0C617 328 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 C8orf88P0DMB2 117 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 IGLC2P0DOY2 106 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 IGLC3P0DOY3 106 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 CBLN1P23435 193 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 PRCDQ00LT1 54 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 PAX8Q06710 450 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 PSG7Q13046 419 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 SPATA45Q537H7 98 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 CENPWQ5EE01 88 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 PSMG4Q5JS54 123 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 MIC13Q5XKP0 118 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 STUMQ69YW2 141 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 WDR82Q6UXN9 313 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 C11orf53Q8IXP5 236 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 KLF14Q8TD94 323 aaPredicted RBP3.16□□□□□ -1.9
LINC00561-201ENST00000565815 LINC00479Q96M42 142 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 PMCHL2Q9BQD1 86 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 BPESC1Q9GZL8 116 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 ST20Q9HBF5 79 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 GNG12Q9UBI6 72 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 CTSZQ9UBR2 303 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 YTHDF2Q9Y5A9 579 aaKnown RBP3.16□□□□□ -1.9
LINC00561-201ENST00000565815 NIPBLQ6KC79 2804 aaeCLIP3.16□□□□□ -1.9
LINC00561-201ENST00000565815 IGHV3OR16-10A0A075B7F0 116 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 TRAV9-2A0A087WT02 112 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 IGHV1-69-2A0A0G2JMI3 117 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 A0A0J9YWU9 116 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 K7EN84 100 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 M0R1X1 148 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 HIST1H1EP10412 219 aaKnown RBP3.16□□□□□ -1.9
LINC00561-201ENST00000565815 G0S2P27469 103 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 GPR6P46095 362 aaPredicted RBP3.16□□□□□ -1.9
LINC00561-201ENST00000565815 AESQ08117 197 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 PRSS8Q16651 343 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 MUC21Q5SSG8 566 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 IBA57Q5T440 356 aaKnown RBP3.16□□□□□ -1.9
LINC00561-201ENST00000565815 ZNF738Q8NE65 137 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 OR5T1Q8NG75 326 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 VN1R17PQ8TDU5 208 aa3.16□□□□□ -1.9
LINC00561-201ENST00000565815 CHCHD1Q96BP2 118 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms