RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 LINC01561Q8N1V8 128 aa3.42□□□□□ -1.86
CHD9-206ENST00000562791 ZCCHC24Q8N2G6 241 aaKnown RBP3.42□□□□□ -1.86
CHD9-206ENST00000562791 DRAM1Q8N682 238 aa3.42□□□□□ -1.86
CHD9-206ENST00000562791 LINC01555Q8NAE3 123 aa3.42□□□□□ -1.86
CHD9-206ENST00000562791 FAM57AQ8TBR7 257 aa3.42□□□□□ -1.86
CHD9-206ENST00000562791 LRRC29Q8WV35 223 aa3.42□□□□□ -1.86
CHD9-206ENST00000562791 NABP1Q96AH0 204 aa3.42□□□□□ -1.86
CHD9-206ENST00000562791 BORCS8Q96FH0 119 aa3.42□□□□□ -1.86
CHD9-206ENST00000562791 UBE2E2Q96LR5 201 aa3.42□□□□□ -1.86
CHD9-206ENST00000562791 C18orf15Q96N68 181 aa3.42□□□□□ -1.86
CHD9-206ENST00000562791 ODF3Q96PU9 254 aa3.42□□□□□ -1.86
CHD9-206ENST00000562791 S1PR3Q99500 378 aa3.42□□□□□ -1.86
CHD9-206ENST00000562791 CHCHD5Q9BSY4 110 aa3.42□□□□□ -1.86
CHD9-206ENST00000562791 C11orf1Q9H5F2 150 aa3.42□□□□□ -1.86
CHD9-206ENST00000562791 C16orf95Q9H693 158 aa3.42□□□□□ -1.86
CHD9-206ENST00000562791 ZNF665Q9H7R5 613 aa3.42□□□□□ -1.86
CHD9-206ENST00000562791 ZNF331Q9NQX6 463 aaPredicted RBP3.42□□□□□ -1.86
CHD9-206ENST00000562791 PHPT1Q9NRX4 125 aaPredicted RBP3.42□□□□□ -1.86
CHD9-206ENST00000562791 RPUSD1Q9UJJ7 312 aaKnown RBP3.42□□□□□ -1.86
CHD9-206ENST00000562791 PILRAQ9UKJ1 303 aa3.42□□□□□ -1.86
CHD9-206ENST00000562791 CASP8AP2Q9UKL3 1982 aa3.42□□□□□ -1.86
CHD9-206ENST00000562791 DOCK6Q96HP0 2047 aa3.41□□□□□ -1.86
CHD9-206ENST00000562791 TRGV5A0A0B4J1U4 118 aa3.41□□□□□ -1.86
CHD9-206ENST00000562791 TRBV5-5A0A0J9YX44 114 aa3.41□□□□□ -1.86
CHD9-206ENST00000562791 K7EM74 188 aa3.41□□□□□ -1.86
CHD9-206ENST00000562791 CDX4O14627 284 aaPredicted RBP3.41□□□□□ -1.86
CHD9-206ENST00000562791 FFAR1O14842 300 aa3.41□□□□□ -1.86
CHD9-206ENST00000562791 ASAH2BP0C7U1 165 aa3.41□□□□□ -1.86
CHD9-206ENST00000562791 DUTP33316 252 aaKnown RBP3.41□□□□□ -1.86
CHD9-206ENST00000562791 RPL30P62888 115 aaKnown RBP3.41□□□□□ -1.86
CHD9-206ENST00000562791 SUPT4H1P63272 117 aaKnown RBP3.41□□□□□ -1.86
CHD9-206ENST00000562791 HBG1P69891 147 aa3.41□□□□□ -1.86
CHD9-206ENST00000562791 HBG2P69892 147 aa3.41□□□□□ -1.86
CHD9-206ENST00000562791 MRPS36P82909 103 aaKnown RBP3.41□□□□□ -1.86
CHD9-206ENST00000562791 SRSF9Q13242 221 aaKnown RBP eCLIP3.41□□□□□ -1.86
CHD9-206ENST00000562791 FAM219BQ5XKK7 198 aa3.41□□□□□ -1.86
CHD9-206ENST00000562791 DGAT2L6Q6ZPD8 337 aa3.41□□□□□ -1.86
CHD9-206ENST00000562791 Q6ZQT7 251 aa3.41□□□□□ -1.86
CHD9-206ENST00000562791 OVOL2Q9BRP0 275 aa3.41□□□□□ -1.86
CHD9-206ENST00000562791 HDHD3Q9BSH5 251 aaPredicted RBP3.41□□□□□ -1.86
CHD9-206ENST00000562791 HES7Q9BYE0 225 aa3.41□□□□□ -1.86
CHD9-206ENST00000562791 OTORQ9NRC9 128 aa3.41□□□□□ -1.86
CHD9-206ENST00000562791 STARD5Q9NSY2 213 aa3.41□□□□□ -1.86
CHD9-206ENST00000562791 CTSZQ9UBR2 303 aa3.41□□□□□ -1.86
CHD9-206ENST00000562791 C19orf25Q9UFG5 118 aaPredicted RBP3.41□□□□□ -1.86
CHD9-206ENST00000562791 KLK5Q9Y337 293 aaPredicted RBP3.41□□□□□ -1.86
CHD9-206ENST00000562791 ITGB4P16144 1822 aa3.41□□□□□ -1.86
CHD9-206ENST00000562791 SHROOM3Q8TF72 1996 aa3.41□□□□□ -1.86
CHD9-206ENST00000562791 MED12LQ86YW9 2145 aa3.41□□□□□ -1.86
CHD9-206ENST00000562791 FANCMQ8IYD8 2048 aa3.41□□□□□ -1.86
CHD9-206ENST00000562791 TRAV8-2A0A0B4J237 113 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 TRAV8-4A0A0B4J246 113 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 C2CD4DB7Z1M9 353 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 H3BT86 120 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 J3QLW9 94 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 CST7O76096 145 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 NDUFB2O95178 105 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 LEPROTL1O95214 131 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 SLC25A14O95258 325 aaPredicted RBP3.4□□□□□ -1.87
CHD9-206ENST00000562791 IGKV3-15P01624 115 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 IGKV5-2P06315 115 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 ACYP1P07311 99 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 CTLA4P16410 223 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 PLXNA3P51805 1871 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 LIM2P55344 173 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 KRTAP10-8P60410 259 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 NPC2P61916 151 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 HIST1H4AP62805 103 aaKnown RBP3.4□□□□□ -1.87
CHD9-206ENST00000562791 RTL8BQ17RB0 113 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 LGALS9BQ3B8N2 356 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 FAM19A2Q8N3H0 131 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 C3orf56Q8N813 242 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 DCAF4L2Q8NA75 395 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 MORN4Q8NDC4 146 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 TMEM158Q8WZ71 300 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 TSACCQ96A04 125 aaPredicted RBP3.4□□□□□ -1.87
CHD9-206ENST00000562791 IGF2BP2-AS1Q96M15 143 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 MGST2Q99735 147 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 PRSS27Q9BQR3 290 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 SRXN1Q9BYN0 137 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 AICDAQ9GZX7 198 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 FAM60AQ9NP50 221 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 DAZ1Q9NQZ3 744 aaKnown RBP3.4□□□□□ -1.87
CHD9-206ENST00000562791 CKLFQ9UBR5 152 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 ZNF256Q9Y2P7 627 aaPredicted RBP3.4□□□□□ -1.87
CHD9-206ENST00000562791 TIMM9Q9Y5J7 89 aa3.4□□□□□ -1.87
CHD9-206ENST00000562791 NLRC5Q86WI3 1866 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 VWA8A3KMH1 1905 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 ANKRD36A6QL64 1941 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 PAPPA2Q9BXP8 1791 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 TRAV17A0A0B4J275 112 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 TCRBV4S1A1TA0A5B7 111 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 KNCNA6PVL3 124 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 C9JCJ5 164 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 MRPS12O15235 138 aaKnown RBP3.39□□□□□ -1.87
CHD9-206ENST00000562791 SCRG1O75711 98 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 TCL1BO95988 128 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 SSR2P43308 183 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 FXYD2P54710 66 aa3.39□□□□□ -1.87
CHD9-206ENST00000562791 APOC4P55056 127 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms