RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 C14orf144Q96I85 54 aa7.53□□□□□ -1.2
RTF1-206ENST00000560447 USMG5Q96IX5 58 aa7.53□□□□□ -1.2
RTF1-206ENST00000560447 SGK494Q96LW2 274 aa7.53□□□□□ -1.2
RTF1-206ENST00000560447 C17orf77Q96MU5 243 aa7.53□□□□□ -1.2
RTF1-206ENST00000560447 METTL26Q96S19 204 aa7.53□□□□□ -1.2
RTF1-206ENST00000560447 PPP1R14DQ9NXH3 145 aa7.53□□□□□ -1.2
RTF1-206ENST00000560447 U3KQE9 123 aa7.53□□□□□ -1.2
RTF1-206ENST00000560447 SMG1Q96Q15 3661 aaKnown RBP7.52□□□□□ -1.21
RTF1-206ENST00000560447 LRBAP50851 2863 aa7.52□□□□□ -1.21
RTF1-206ENST00000560447 LOC102724200A0A096LPH7 203 aaPredicted RBP7.52□□□□□ -1.21
RTF1-206ENST00000560447 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.52□□□□□ -1.21
RTF1-206ENST00000560447 A6NDX4 124 aa7.52□□□□□ -1.21
RTF1-206ENST00000560447 B4DSR2 109 aa7.52□□□□□ -1.21
RTF1-206ENST00000560447 IGHG2P01859 326 aa7.52□□□□□ -1.21
RTF1-206ENST00000560447 CLEC3BP05452 202 aa7.52□□□□□ -1.21
RTF1-206ENST00000560447 MSMBP08118 114 aa7.52□□□□□ -1.21
RTF1-206ENST00000560447 OR5AL1P0C617 328 aa7.52□□□□□ -1.21
RTF1-206ENST00000560447 CAMPP49913 170 aa7.52□□□□□ -1.21
RTF1-206ENST00000560447 ATP5J2P56134 94 aa7.52□□□□□ -1.21
RTF1-206ENST00000560447 PMCHL1Q16048 86 aa7.52□□□□□ -1.21
RTF1-206ENST00000560447 PIFOQ8TCI5 191 aa7.52□□□□□ -1.21
RTF1-206ENST00000560447 PGLYRP4Q96LB8 373 aa7.52□□□□□ -1.21
RTF1-206ENST00000560447 CCDC140Q96MF4 163 aa7.52□□□□□ -1.21
RTF1-206ENST00000560447 PRR25Q96S07 402 aa7.52□□□□□ -1.21
RTF1-206ENST00000560447 PRO1933Q9H354 126 aa7.52□□□□□ -1.21
RTF1-206ENST00000560447 SMAD5-AS1Q9Y6J3 95 aa7.52□□□□□ -1.21
RTF1-206ENST00000560447 TRAV40A0A0B4J280 105 aa7.51□□□□□ -1.21
RTF1-206ENST00000560447 C20orf202A1L168 122 aa7.51□□□□□ -1.21
RTF1-206ENST00000560447 TMEM189A5PLL7 270 aa7.51□□□□□ -1.21
RTF1-206ENST00000560447 ZNF785A8K8V0 405 aa7.51□□□□□ -1.21
RTF1-206ENST00000560447 F2Z2F3 143 aa7.51□□□□□ -1.21
RTF1-206ENST00000560447 J3QLI3 93 aa7.51□□□□□ -1.21
RTF1-206ENST00000560447 M0R3E3 92 aa7.51□□□□□ -1.21
RTF1-206ENST00000560447 NIT1Q86X76 327 aa7.51□□□□□ -1.21
RTF1-206ENST00000560447 RCHY1Q96PM5 261 aa7.51□□□□□ -1.21
RTF1-206ENST00000560447 VAMP8Q9BV40 100 aa7.51□□□□□ -1.21
RTF1-206ENST00000560447 LENEPQ9Y5L5 61 aa7.51□□□□□ -1.21
RTF1-206ENST00000560447 S4R3C0 116 aa7.51□□□□□ -1.21
RTF1-206ENST00000560447 WNK2Q9Y3S1 2297 aa7.51□□□□□ -1.21
RTF1-206ENST00000560447 ITPR1Q14643 2758 aa7.51□□□□□ -1.21
RTF1-206ENST00000560447 NBASA2RRP1 2371 aa7.51□□□□□ -1.21
RTF1-206ENST00000560447 DCHS2Q6V1P9 2916 aa7.5□□□□□ -1.21
RTF1-206ENST00000560447 TMEM89A2RUT3 159 aa7.5□□□□□ -1.21
RTF1-206ENST00000560447 NDUFA4O00483 81 aa7.5□□□□□ -1.21
RTF1-206ENST00000560447 ZZEF1O43149 2961 aa7.5□□□□□ -1.21
RTF1-206ENST00000560447 CTRLP40313 264 aa7.5□□□□□ -1.21
RTF1-206ENST00000560447 CRIP1P50238 77 aa7.5□□□□□ -1.21
RTF1-206ENST00000560447 CLEC19AQ6UXS0 136 aa7.5□□□□□ -1.21
RTF1-206ENST00000560447 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.5□□□□□ -1.21
RTF1-206ENST00000560447 C9orf139Q6ZV77 190 aa7.5□□□□□ -1.21
RTF1-206ENST00000560447 ASCL2Q99929 193 aa7.5□□□□□ -1.21
RTF1-206ENST00000560447 C2orf88Q9BSF0 95 aa7.5□□□□□ -1.21
RTF1-206ENST00000560447 ABCA1O95477 2261 aa7.5□□□□□ -1.21
RTF1-206ENST00000560447 A0A0G2JLM5 398 aa7.49□□□□□ -1.21
RTF1-206ENST00000560447 CLPSL1A2RUU4 121 aa7.49□□□□□ -1.21
RTF1-206ENST00000560447 FABP5P3A8MUU1 101 aa7.49□□□□□ -1.21
RTF1-206ENST00000560447 G3V318 75 aa7.49□□□□□ -1.21
RTF1-206ENST00000560447 M0R2Z0 102 aa7.49□□□□□ -1.21
RTF1-206ENST00000560447 SH2D1AO60880 128 aa7.49□□□□□ -1.21
RTF1-206ENST00000560447 IGHV3-23P01764 117 aa7.49□□□□□ -1.21
RTF1-206ENST00000560447 IGHG4P01861 327 aa7.49□□□□□ -1.21
RTF1-206ENST00000560447 HIST1H1AQ02539 215 aaPredicted RBP7.49□□□□□ -1.21
RTF1-206ENST00000560447 SAMD13Q5VXD3 122 aa7.49□□□□□ -1.21
RTF1-206ENST00000560447 LCN12Q6JVE5 192 aa7.49□□□□□ -1.21
RTF1-206ENST00000560447 BCL6BQ8N143 479 aaPredicted RBP7.49□□□□□ -1.21
RTF1-206ENST00000560447 KLHDC1Q8N7A1 406 aa7.49□□□□□ -1.21
RTF1-206ENST00000560447 Q8N976 141 aa7.49□□□□□ -1.21
RTF1-206ENST00000560447 MIEN1Q9BRT3 115 aa7.49□□□□□ -1.21
RTF1-206ENST00000560447 CNFNQ9BYD5 112 aa7.49□□□□□ -1.21
RTF1-206ENST00000560447 KRTAP4-8Q9BYQ9 185 aa7.49□□□□□ -1.21
RTF1-206ENST00000560447 ABCA2Q9BZC7 2435 aa7.48□□□□□ -1.21
RTF1-206ENST00000560447 IGHV4-30-2A0A087WSY4 118 aa7.48□□□□□ -1.21
RTF1-206ENST00000560447 CRXO43186 299 aaPredicted RBP7.48□□□□□ -1.21
RTF1-206ENST00000560447 TRGV3P03979 118 aa7.48□□□□□ -1.21
RTF1-206ENST00000560447 ARMS2P0C7Q2 107 aa7.48□□□□□ -1.21
RTF1-206ENST00000560447 LINC00614P0C842 121 aa7.48□□□□□ -1.21
RTF1-206ENST00000560447 C3orf79P0CE67 100 aa7.48□□□□□ -1.21
RTF1-206ENST00000560447 BTF3P20290 206 aaKnown RBP7.48□□□□□ -1.21
RTF1-206ENST00000560447 PPIFP30405 207 aaKnown RBP7.48□□□□□ -1.21
RTF1-206ENST00000560447 KRTDAPP60985 99 aa7.48□□□□□ -1.21
RTF1-206ENST00000560447 LINC01356Q8N9X3 169 aa7.48□□□□□ -1.21
RTF1-206ENST00000560447 U3KQK5 164 aa7.48□□□□□ -1.21
RTF1-206ENST00000560447 NCOR2Q9Y618 2525 aa7.48□□□□□ -1.21
RTF1-206ENST00000560447 IGKV2-40A0A087WW87 121 aaPredicted RBP7.47□□□□□ -1.21
RTF1-206ENST00000560447 TRBV7-9A0A0J9YWB2 115 aa7.47□□□□□ -1.21
RTF1-206ENST00000560447 IGKV2D-40P01614 121 aaPredicted RBP7.47□□□□□ -1.21
RTF1-206ENST00000560447 IGLC6P0CF74 106 aa7.47□□□□□ -1.21
RTF1-206ENST00000560447 NTF3P20783 257 aa7.47□□□□□ -1.21
RTF1-206ENST00000560447 ARL3P36405 182 aa7.47□□□□□ -1.21
RTF1-206ENST00000560447 RNASEKQ6P5S7 137 aaKnown RBP7.47□□□□□ -1.21
RTF1-206ENST00000560447 C9orf47Q6ZRZ4 202 aa7.47□□□□□ -1.21
RTF1-206ENST00000560447 GLMPQ8WWB7 406 aa7.47□□□□□ -1.21
RTF1-206ENST00000560447 C8orf49Q96NF6 230 aa7.47□□□□□ -1.21
RTF1-206ENST00000560447 LAMTOR2Q9Y2Q5 125 aa7.47□□□□□ -1.21
RTF1-206ENST00000560447 PKD1L2Q7Z442 2459 aa7.47□□□□□ -1.21
RTF1-206ENST00000560447 CHD8Q9HCK8 2581 aa7.47□□□□□ -1.21
RTF1-206ENST00000560447 PIEZO1Q92508 2521 aa7.46□□□□□ -1.21
RTF1-206ENST00000560447 C2orf70A6NJV1 201 aa7.46□□□□□ -1.22
RTF1-206ENST00000560447 LINC01548A6NM66 108 aa7.46□□□□□ -1.22
RTF1-206ENST00000560447 H3BUX3 64 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms