RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 LTBP2Q14767 1821 aa2.01□□□□□ -2.09
TDP1-217ENST00000557782 STRCQ7RTU9 1775 aa2□□□□□ -2.09
TDP1-217ENST00000557782 KIF14Q15058 1648 aa2□□□□□ -2.09
TDP1-217ENST00000557782 IGKV1D-17A0A075B6S4 117 aa2□□□□□ -2.09
TDP1-217ENST00000557782 A0A0G2JQZ4 141 aa2□□□□□ -2.09
TDP1-217ENST00000557782 hDV103S1A0JD37 113 aa2□□□□□ -2.09
TDP1-217ENST00000557782 FAM92AA1XBS5 289 aa2□□□□□ -2.09
TDP1-217ENST00000557782 SDHAF1A6NFY7 115 aa2□□□□□ -2.09
TDP1-217ENST00000557782 ZNF727A8MUV8 499 aa2□□□□□ -2.09
TDP1-217ENST00000557782 DLEU1O43261 78 aa2□□□□□ -2.09
TDP1-217ENST00000557782 NCR2O95944 276 aa2□□□□□ -2.09
TDP1-217ENST00000557782 SLC25A5P05141 298 aaKnown RBP2□□□□□ -2.09
TDP1-217ENST00000557782 ASAH2BP0C7U1 165 aa2□□□□□ -2.09
TDP1-217ENST00000557782 LINC00694P0DN24 101 aa2□□□□□ -2.09
TDP1-217ENST00000557782 HIST1H1BP16401 226 aaKnown RBP2□□□□□ -2.09
TDP1-217ENST00000557782 KDELR1P24390 212 aa2□□□□□ -2.09
TDP1-217ENST00000557782 KRTAP10-3P60369 221 aa2□□□□□ -2.09
TDP1-217ENST00000557782 ROMO1P60602 79 aa2□□□□□ -2.09
TDP1-217ENST00000557782 RRAS2P62070 204 aaPredicted RBP2□□□□□ -2.09
TDP1-217ENST00000557782 CDK6Q00534 326 aa2□□□□□ -2.09
TDP1-217ENST00000557782 ZNF846Q147U1 533 aa2□□□□□ -2.09
TDP1-217ENST00000557782 ELOBQ15370 118 aa2□□□□□ -2.09
TDP1-217ENST00000557782 C9orf163Q8N9P6 203 aa2□□□□□ -2.09
TDP1-217ENST00000557782 OR5D14Q8NGL3 314 aa2□□□□□ -2.09
TDP1-217ENST00000557782 OR4C6Q8NH72 309 aa2□□□□□ -2.09
TDP1-217ENST00000557782 TMEM254Q8TBM7 123 aa2□□□□□ -2.09
TDP1-217ENST00000557782 ARL11Q969Q4 196 aa2□□□□□ -2.09
TDP1-217ENST00000557782 OR4C12Q96R67 309 aa2□□□□□ -2.09
TDP1-217ENST00000557782 TNFSF18Q9UNG2 199 aa2□□□□□ -2.09
TDP1-217ENST00000557782 PLXNA3P51805 1871 aa2□□□□□ -2.09
TDP1-217ENST00000557782 SDK2Q58EX2 2172 aa2□□□□□ -2.09
TDP1-217ENST00000557782 MAGI3Q5TCQ9 1506 aa2□□□□□ -2.09
TDP1-217ENST00000557782 UGGT2Q9NYU1 1516 aa2□□□□□ -2.09
TDP1-217ENST00000557782 COL11A1P12107 1806 aaPredicted RBP2□□□□□ -2.09
TDP1-217ENST00000557782 SPEF2Q9C093 1822 aa2□□□□□ -2.09
TDP1-217ENST00000557782 CCDC18Q5T9S5 1454 aa2□□□□□ -2.09
TDP1-217ENST00000557782 BCORL1Q5H9F3 1711 aa2□□□□□ -2.09
TDP1-217ENST00000557782 RTEL1-TNFRSF6BF6WH68 1400 aa2□□□□□ -2.09
TDP1-217ENST00000557782 FAM135BQ49AJ0 1406 aa2□□□□□ -2.09
TDP1-217ENST00000557782 MYH6P13533 1939 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 MYH13Q9UKX3 1938 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 NESP48681 1621 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 LOC107986453A0A1B0GWG9 222 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 CRPP02741 224 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 SAA1P0DJI8 122 aaPredicted RBP1.99□□□□□ -2.09
TDP1-217ENST00000557782 HLA-DRB4P13762 266 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 SSR2P43308 183 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 AKR1D1P51857 326 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 CIRBPQ14011 172 aaKnown RBP1.99□□□□□ -2.09
TDP1-217ENST00000557782 NEDD8Q15843 81 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 WHAMMP3Q1A5X7 153 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 HCP5Q6MZN7 132 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 MUCL1Q96DR8 90 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 C2orf88Q9BSF0 95 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 LINC00470Q9BZP3 86 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 HLA-DRB4X5D2U9 266 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 ABCA10Q8WWZ4 1543 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 CDC42BPAQ5VT25 1732 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 MYO5CQ9NQX4 1742 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 RP1P56715 2156 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 ITSN2Q9NZM3 1697 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 HFM1A2PYH4 1435 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 FGD6Q6ZV73 1430 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 CASKIN1Q8WXD9 1431 aa1.99□□□□□ -2.09
TDP1-217ENST00000557782 ADAMTS12P58397 1594 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 FRMPD1Q5SYB0 1578 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 TRAV27A0A087WT01 109 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 TRGV4A0A0C4DH28 118 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 LINC00587B1AMM8 73 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 FAM25AB3EWG3 89 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 FAM25CB3EWG5 89 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 FAM25GB3EWG6 89 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 NPFFO15130 113 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 ZNF737O75373 536 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 IGLV1-51P01701 117 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 TRACP01848 142 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 P0C880 135 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 DSCR4P56555 118 aaPredicted RBP1.98□□□□□ -2.09
TDP1-217ENST00000557782 C1orf134Q5TEV5 83 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 TMEM91Q6ZNR0 172 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 LINC00311Q8N616 119 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 Q8N814 137 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 OR10AC1Q8NH08 325 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 CCL4L1Q8NHW4 92 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 TMEM203Q969S6 136 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 RAB37Q96AX2 223 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 TEX14Q8IWB6 1497 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 HEATR5BQ9P2D3 2071 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 KDM6AO15550 1401 aaPredicted RBP1.98□□□□□ -2.09
TDP1-217ENST00000557782 TARBP1Q13395 1621 aaKnown RBP1.98□□□□□ -2.09
TDP1-217ENST00000557782 ADCY10Q96PN6 1610 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 MYH9P35579 1960 aaKnown RBP1.98□□□□□ -2.09
TDP1-217ENST00000557782 KDM5CP41229 1560 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 COL1A2P08123 1366 aa1.98□□□□□ -2.09
TDP1-217ENST00000557782 DIDO1Q9BTC0 2240 aaKnown RBP1.97□□□□□ -2.09
TDP1-217ENST00000557782 POLA1P09884 1462 aaPredicted RBP1.97□□□□□ -2.09
TDP1-217ENST00000557782 MBD5Q9P267 1494 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 IGKV2D-26A0A0A0MRZ7 120 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 IGKV3D-11A0A0A0MRZ8 115 aa1.97□□□□□ -2.09
TDP1-217ENST00000557782 MIF4GDA9UHW6 222 aaKnown RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms