RNA–Protein interactions for RNA: ENST00000556869.1

LINC00871-203, long intergenic non-protein coding RNA 871, humanhuman

TSL 2

Gene LINC00871, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-203ENST00000556869 BCL9O00512 1426 aa0.2□□□□□ -2.38
LINC00871-203ENST00000556869 TRAV5A0A0B4J249 113 aa0.19□□□□□ -2.38
LINC00871-203ENST00000556869 GPR31O00270 319 aa0.19□□□□□ -2.38
LINC00871-203ENST00000556869 MRPS15P82914 257 aaKnown RBP0.19□□□□□ -2.38
LINC00871-203ENST00000556869 LINC00299Q6ZSB3 139 aa0.19□□□□□ -2.38
LINC00871-203ENST00000556869 ATOH7Q8N100 152 aa0.19□□□□□ -2.38
LINC00871-203ENST00000556869 FAM216BQ8N7L0 139 aa0.19□□□□□ -2.38
LINC00871-203ENST00000556869 NEK7Q8TDX7 302 aa0.19□□□□□ -2.38
LINC00871-203ENST00000556869 MALSU1Q96EH3 234 aa0.19□□□□□ -2.38
LINC00871-203ENST00000556869 LIMD2Q9BT23 127 aa0.19□□□□□ -2.38
LINC00871-203ENST00000556869 SH3BGRL3Q9H299 93 aa0.19□□□□□ -2.38
LINC00871-203ENST00000556869 TNCP24821 2201 aa0.19□□□□□ -2.38
LINC00871-203ENST00000556869 TRPM1Q7Z4N2 1603 aa0.19□□□□□ -2.38
LINC00871-203ENST00000556869 CD109Q6YHK3 1445 aa0.19□□□□□ -2.38
LINC00871-203ENST00000556869 PTPRDP23468 1912 aa0.19□□□□□ -2.38
LINC00871-203ENST00000556869 PIK3C2AO00443 1686 aa0.18□□□□□ -2.38
LINC00871-203ENST00000556869 IFNA1P01562 189 aa0.18□□□□□ -2.38
LINC00871-203ENST00000556869 MT-ND6P03923 174 aa0.18□□□□□ -2.38
LINC00871-203ENST00000556869 KRTAP2-3P0C7H8 128 aa0.18□□□□□ -2.38
LINC00871-203ENST00000556869 RPL35P42766 123 aaKnown RBP0.18□□□□□ -2.38
LINC00871-203ENST00000556869 RPL37AP61513 92 aaKnown RBP0.18□□□□□ -2.38
LINC00871-203ENST00000556869 ARF6P62330 175 aa0.18□□□□□ -2.38
LINC00871-203ENST00000556869 HBBP68871 147 aa0.18□□□□□ -2.38
LINC00871-203ENST00000556869 RPL19P84098 196 aaKnown RBP0.18□□□□□ -2.38
LINC00871-203ENST00000556869 MIR22HGQ0VDD5 57 aa0.18□□□□□ -2.38
LINC00871-203ENST00000556869 DIAPH2-AS1Q14236 149 aa0.18□□□□□ -2.38
LINC00871-203ENST00000556869 C1orf140Q5VVS0 124 aa0.18□□□□□ -2.38
LINC00871-203ENST00000556869 FOXI2Q6ZQN5 318 aa0.18□□□□□ -2.38
LINC00871-203ENST00000556869 GINS3Q9BRX5 216 aa0.18□□□□□ -2.38
LINC00871-203ENST00000556869 FAM103A1Q9BTL3 118 aaKnown RBP0.18□□□□□ -2.38
LINC00871-203ENST00000556869 KRTAP2-4Q9BYR9 128 aa0.18□□□□□ -2.38
LINC00871-203ENST00000556869 KRTAP2-1Q9BYU5 128 aa0.18□□□□□ -2.38
LINC00871-203ENST00000556869 CST11Q9H112 138 aa0.18□□□□□ -2.38
LINC00871-203ENST00000556869 STOML2Q9UJZ1 356 aa0.18□□□□□ -2.38
LINC00871-203ENST00000556869 ASB4Q9Y574 426 aa0.18□□□□□ -2.38
LINC00871-203ENST00000556869 FRMPD1Q5SYB0 1578 aa0.18□□□□□ -2.38
LINC00871-203ENST00000556869 NISCHQ9Y2I1 1504 aa0.18□□□□□ -2.38
LINC00871-203ENST00000556869 SYNE1Q8NF91 8797 aaKnown RBP0.17□□□□□ -2.38
LINC00871-203ENST00000556869 CST7O76096 145 aa0.17□□□□□ -2.38
LINC00871-203ENST00000556869 CCL4P13236 92 aa0.17□□□□□ -2.38
LINC00871-203ENST00000556869 BASP1P80723 227 aaKnown RBP0.17□□□□□ -2.38
LINC00871-203ENST00000556869 RTL8BQ17RB0 113 aa0.17□□□□□ -2.38
LINC00871-203ENST00000556869 FKBP1CQ5VVH2 108 aa0.17□□□□□ -2.38
LINC00871-203ENST00000556869 ZCCHC23Q6ZST2 131 aa0.17□□□□□ -2.38
LINC00871-203ENST00000556869 CCL19Q99731 98 aa0.17□□□□□ -2.38
LINC00871-203ENST00000556869 EFCAB11Q9BUY7 163 aa0.17□□□□□ -2.38
LINC00871-203ENST00000556869 RTL8AQ9BWD3 113 aa0.17□□□□□ -2.38
LINC00871-203ENST00000556869 OR2H1Q9GZK4 316 aa0.17□□□□□ -2.38
LINC00871-203ENST00000556869 TPRKBQ9Y3C4 175 aa0.17□□□□□ -2.38
LINC00871-203ENST00000556869 KNTC1P50748 2209 aa0.17□□□□□ -2.38
LINC00871-203ENST00000556869 BCORL1Q5H9F3 1711 aa0.16□□□□□ -2.38
LINC00871-203ENST00000556869 C5orf58C9J3I9 102 aa0.16□□□□□ -2.38
LINC00871-203ENST00000556869 H3BQV1 296 aa0.16□□□□□ -2.38
LINC00871-203ENST00000556869 MFSD11O43934 449 aa0.16□□□□□ -2.38
LINC00871-203ENST00000556869 IGHV3-33P01772 117 aa0.16□□□□□ -2.38
LINC00871-203ENST00000556869 CSN2P05814 226 aa0.16□□□□□ -2.38
LINC00871-203ENST00000556869 TAS2R41P59536 307 aa0.16□□□□□ -2.38
LINC00871-203ENST00000556869 GNG3P63215 75 aa0.16□□□□□ -2.38
LINC00871-203ENST00000556869 QRFPP83859 136 aa0.16□□□□□ -2.38
LINC00871-203ENST00000556869 NEDD8Q15843 81 aa0.16□□□□□ -2.38
LINC00871-203ENST00000556869 CASC2Q6XLA1 102 aa0.16□□□□□ -2.38
LINC00871-203ENST00000556869 TMED4Q7Z7H5 227 aa0.16□□□□□ -2.38
LINC00871-203ENST00000556869 SMIM20Q8N5G0 67 aa0.16□□□□□ -2.38
LINC00871-203ENST00000556869 NUP35Q8NFH5 326 aa0.16□□□□□ -2.38
LINC00871-203ENST00000556869 PLAC4Q8WY50 150 aa0.16□□□□□ -2.38
LINC00871-203ENST00000556869 BORCS8Q96FH0 119 aa0.16□□□□□ -2.38
LINC00871-203ENST00000556869 RMND5BQ96G75 393 aaPredicted RBP0.16□□□□□ -2.38
LINC00871-203ENST00000556869 AP1S3Q96PC3 154 aa0.16□□□□□ -2.38
LINC00871-203ENST00000556869 OR4C12Q96R67 309 aa0.16□□□□□ -2.38
LINC00871-203ENST00000556869 MED11Q9P086 117 aa0.16□□□□□ -2.38
LINC00871-203ENST00000556869 NAT8BQ9UHF3 227 aa0.16□□□□□ -2.38
LINC00871-203ENST00000556869 MYH2Q9UKX2 1941 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 LOC285556D6RIA3 1793 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 C3orf85A0A1B0GTC6 90 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 KPNA4O00629 521 aaPredicted RBP0.15□□□□□ -2.39
LINC00871-203ENST00000556869 PIAS1O75925 651 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 FABP2P12104 132 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 FABP4P15090 132 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 PDE6GP18545 87 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 GLRXP35754 106 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 TCTAP57738 103 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 POU6F1Q14863 301 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 LTC4SQ16873 150 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 PHF5AQ7RTV0 110 aaKnown RBP0.15□□□□□ -2.39
LINC00871-203ENST00000556869 C10orf111Q8N326 155 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 FAM24BQ8N5W8 94 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 C5orf17Q8NAS9 161 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 OR4B1Q8NGF8 309 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 OR5AK2Q8NH90 309 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 GRPEL2Q8TAA5 225 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 DYDC1Q8WWB3 177 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 AP3S1Q92572 193 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 PLEKHB2Q96CS7 222 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 MCEEQ96PE7 176 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 RTL9Q8NET4 1388 aa0.15□□□□□ -2.39
LINC00871-203ENST00000556869 MAST4O15021 2626 aa0.14□□□□□ -2.39
LINC00871-203ENST00000556869 A0A0J9YY99 117 aa0.14□□□□□ -2.39
LINC00871-203ENST00000556869 PRORSD1PA6NEY8 169 aa0.14□□□□□ -2.39
LINC00871-203ENST00000556869 SULT1C4O75897 302 aa0.14□□□□□ -2.39
LINC00871-203ENST00000556869 RPS3P23396 243 aaKnown RBP eCLIP0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms