RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 SCGB2A1O75556 95 aa11.77□□□□□ -0.53
PDE1B-207ENST00000550620 IGKV2D-40P01614 121 aaPredicted RBP11.77□□□□□ -0.53
PDE1B-207ENST00000550620 EGR2P11161 476 aaPredicted RBP11.77□□□□□ -0.53
PDE1B-207ENST00000550620 TCTAP57738 103 aa11.77□□□□□ -0.53
PDE1B-207ENST00000550620 GFRALQ6UXV0 394 aa11.77□□□□□ -0.53
PDE1B-207ENST00000550620 NEGR1Q7Z3B1 354 aa11.77□□□□□ -0.53
PDE1B-207ENST00000550620 PCP2Q8IVA1 136 aa11.77□□□□□ -0.53
PDE1B-207ENST00000550620 ABHD17AQ96GS6 310 aa11.77□□□□□ -0.53
PDE1B-207ENST00000550620 ARFGEF3Q5TH69 2177 aa11.77□□□□□ -0.53
PDE1B-207ENST00000550620 SMKR1H3BMG3 65 aa11.77□□□□□ -0.53
PDE1B-207ENST00000550620 IGLC6P0CF74 106 aa11.77□□□□□ -0.53
PDE1B-207ENST00000550620 SMIM13P0DJ93 91 aa11.77□□□□□ -0.53
PDE1B-207ENST00000550620 SPENQ96T58 3664 aaKnown RBP11.76□□□□□ -0.53
PDE1B-207ENST00000550620 LINC01546A6NGU7 62 aa11.76□□□□□ -0.53
PDE1B-207ENST00000550620 B9A039 149 aa11.76□□□□□ -0.53
PDE1B-207ENST00000550620 NXT2Q9NPJ8 142 aaKnown RBP11.76□□□□□ -0.53
PDE1B-207ENST00000550620 HIGD1BQ9P298 99 aa11.76□□□□□ -0.53
PDE1B-207ENST00000550620 DKK2Q9UBU2 259 aa11.76□□□□□ -0.53
PDE1B-207ENST00000550620 PLCE1Q9P212 2302 aa11.76□□□□□ -0.53
PDE1B-207ENST00000550620 NPIPB5A8MRT5 1133 aa11.75□□□□□ -0.53
PDE1B-207ENST00000550620 NDUFA3O95167 84 aa11.75□□□□□ -0.53
PDE1B-207ENST00000550620 SMIM17P0DL12 118 aa11.75□□□□□ -0.53
PDE1B-207ENST00000550620 S100A7P31151 101 aa11.75□□□□□ -0.53
PDE1B-207ENST00000550620 NPBQ8NG41 125 aa11.75□□□□□ -0.53
PDE1B-207ENST00000550620 NAA38Q9BRA0 125 aaKnown RBP11.75□□□□□ -0.53
PDE1B-207ENST00000550620 ICE1Q9Y2F5 2266 aa11.75□□□□□ -0.53
PDE1B-207ENST00000550620 IGLV11-55A0A075B6I3 123 aa11.75□□□□□ -0.53
PDE1B-207ENST00000550620 FCER1GP30273 86 aa11.75□□□□□ -0.53
PDE1B-207ENST00000550620 RIPPLY3P57055 190 aa11.75□□□□□ -0.53
PDE1B-207ENST00000550620 ONECUT1Q9UBC0 465 aa11.75□□□□□ -0.53
PDE1B-207ENST00000550620 WDFY4Q6ZS81 3184 aa11.74□□□□□ -0.53
PDE1B-207ENST00000550620 KLF17Q5JT82 389 aaPredicted RBP11.74□□□□□ -0.53
PDE1B-207ENST00000550620 CNFNQ9BYD5 112 aa11.74□□□□□ -0.53
PDE1B-207ENST00000550620 C21orf62Q9NYP8 219 aa11.74□□□□□ -0.53
PDE1B-207ENST00000550620 DPM3Q9P2X0 92 aa11.74□□□□□ -0.53
PDE1B-207ENST00000550620 S4R3C0 116 aa11.74□□□□□ -0.53
PDE1B-207ENST00000550620 NCOR1O75376 2440 aa11.74□□□□□ -0.53
PDE1B-207ENST00000550620 LEPP41159 167 aa11.74□□□□□ -0.53
PDE1B-207ENST00000550620 SAMD5Q5TGI4 173 aa11.74□□□□□ -0.53
PDE1B-207ENST00000550620 PRSS57Q6UWY2 283 aa11.74□□□□□ -0.53
PDE1B-207ENST00000550620 C18orf15Q96N68 181 aa11.74□□□□□ -0.53
PDE1B-207ENST00000550620 SMPXQ9UHP9 88 aa11.74□□□□□ -0.53
PDE1B-207ENST00000550620 PLXNB1O43157 2135 aa11.73□□□□□ -0.53
PDE1B-207ENST00000550620 GCSHP23434 173 aa11.73□□□□□ -0.53
PDE1B-207ENST00000550620 ODF1Q14990 250 aa11.73□□□□□ -0.53
PDE1B-207ENST00000550620 WFDC3Q8IUB2 231 aa11.73□□□□□ -0.53
PDE1B-207ENST00000550620 BCL6BQ8N143 479 aaPredicted RBP11.73□□□□□ -0.53
PDE1B-207ENST00000550620 RNF185Q96GF1 192 aa11.73□□□□□ -0.53
PDE1B-207ENST00000550620 FANCD2OSQ96PS1 177 aa11.73□□□□□ -0.53
PDE1B-207ENST00000550620 ZMAT4Q9H898 229 aa11.73□□□□□ -0.53
PDE1B-207ENST00000550620 ATP5LO75964 103 aa11.72□□□□□ -0.53
PDE1B-207ENST00000550620 IGKCP01834 107 aa11.72□□□□□ -0.53
PDE1B-207ENST00000550620 ORM1P02763 201 aa11.72□□□□□ -0.53
PDE1B-207ENST00000550620 ZNF80P51504 273 aaPredicted RBP11.72□□□□□ -0.53
PDE1B-207ENST00000550620 Q8TAT8 98 aa11.72□□□□□ -0.53
PDE1B-207ENST00000550620 IGFBPL1Q8WX77 278 aa11.72□□□□□ -0.53
PDE1B-207ENST00000550620 SH3BGRL2Q9UJC5 107 aa11.72□□□□□ -0.53
PDE1B-207ENST00000550620 FABP5P3A8MUU1 101 aa11.72□□□□□ -0.53
PDE1B-207ENST00000550620 PRSS1P07477 247 aa11.72□□□□□ -0.53
PDE1B-207ENST00000550620 EVI2AP22794 236 aa11.72□□□□□ -0.53
PDE1B-207ENST00000550620 C5orf64Q2M2E5 130 aa11.72□□□□□ -0.53
PDE1B-207ENST00000550620 CFHR4Q92496 578 aa11.72□□□□□ -0.53
PDE1B-207ENST00000550620 SVILO95425 2214 aa11.72□□□□□ -0.53
PDE1B-207ENST00000550620 MUC3AQ02505 3323 aa11.71□□□□□ -0.53
PDE1B-207ENST00000550620 TMEM238C9JI98 176 aa11.71□□□□□ -0.53
PDE1B-207ENST00000550620 TNFRSF6BO95407 300 aa11.71□□□□□ -0.53
PDE1B-207ENST00000550620 HLA-DRB4P13762 266 aa11.71□□□□□ -0.53
PDE1B-207ENST00000550620 TTC9CQ8N5M4 171 aa11.71□□□□□ -0.53
PDE1B-207ENST00000550620 OR11H6Q8NGC7 330 aa11.71□□□□□ -0.53
PDE1B-207ENST00000550620 ARPC1AQ92747 370 aa11.71□□□□□ -0.53
PDE1B-207ENST00000550620 VGLL1Q99990 258 aa11.71□□□□□ -0.53
PDE1B-207ENST00000550620 CHAC1Q9BUX1 264 aa11.71□□□□□ -0.53
PDE1B-207ENST00000550620 HLA-DRB4X5D2U9 266 aa11.71□□□□□ -0.53
PDE1B-207ENST00000550620 DSPP15924 2871 aaKnown RBP11.71□□□□□ -0.54
PDE1B-207ENST00000550620 A0A1W2PRD5 423 aa11.71□□□□□ -0.54
PDE1B-207ENST00000550620 A0A1W2PRF3 423 aa11.71□□□□□ -0.54
PDE1B-207ENST00000550620 A0A1W2PRM7 423 aa11.71□□□□□ -0.54
PDE1B-207ENST00000550620 F8W735 103 aaPredicted RBP11.71□□□□□ -0.54
PDE1B-207ENST00000550620 CD3EP07766 207 aa11.71□□□□□ -0.54
PDE1B-207ENST00000550620 HES1Q14469 280 aa11.71□□□□□ -0.54
PDE1B-207ENST00000550620 HHLA3Q9XRX5 114 aa11.71□□□□□ -0.54
PDE1B-207ENST00000550620 LYNX1G3V0Z9 82 aa11.7□□□□□ -0.54
PDE1B-207ENST00000550620 DPM2O94777 84 aa11.7□□□□□ -0.54
PDE1B-207ENST00000550620 LYNX1P0DP58 116 aa11.7□□□□□ -0.54
PDE1B-207ENST00000550620 TM4SF20Q53R12 229 aa11.7□□□□□ -0.54
PDE1B-207ENST00000550620 ZNF562Q6V9R5 426 aa11.7□□□□□ -0.54
PDE1B-207ENST00000550620 LY6G5BQ8NDX9 201 aa11.7□□□□□ -0.54
PDE1B-207ENST00000550620 PRRC2CQ9Y520 2896 aaKnown RBP11.7□□□□□ -0.54
PDE1B-207ENST00000550620 FXYD2P54710 66 aa11.69□□□□□ -0.54
PDE1B-207ENST00000550620 IGKV2D-26A0A0A0MRZ7 120 aa11.69□□□□□ -0.54
PDE1B-207ENST00000550620 FOXC2Q99958 501 aa11.69□□□□□ -0.54
PDE1B-207ENST00000550620 MSRB1Q9NZV6 116 aa11.69□□□□□ -0.54
PDE1B-207ENST00000550620 SELENOKQ9Y6D0 94 aa11.69□□□□□ -0.54
PDE1B-207ENST00000550620 Q8N8P6 123 aa11.68□□□□□ -0.54
PDE1B-207ENST00000550620 SMAD5-AS1Q9Y6J3 95 aa11.68□□□□□ -0.54
PDE1B-207ENST00000550620 ZFHX4Q86UP3 3567 aa11.68□□□□□ -0.54
PDE1B-207ENST00000550620 SRSF1Q07955 248 aaKnown RBP eCLIP11.68□□□□□ -0.54
PDE1B-207ENST00000550620 TMEM158Q8WZ71 300 aa11.68□□□□□ -0.54
PDE1B-207ENST00000550620 TM2D2Q9BX73 214 aa11.68□□□□□ -0.54
PDE1B-207ENST00000550620 TRBV25-1A0A075B6N4 114 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms