RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 KRTAP1-3Q8IUG1 177 aa16.13■□□□□ 0.17
PRDM4-205ENST00000550376 Q8TAT8 98 aa16.13■□□□□ 0.17
PRDM4-205ENST00000550376 CRIP2P52943 208 aaPredicted RBP16.13■□□□□ 0.17
PRDM4-205ENST00000550376 LYPD1Q8N2G4 141 aa16.13■□□□□ 0.17
PRDM4-205ENST00000550376 GTSF1Q8WW33 167 aa16.13■□□□□ 0.17
PRDM4-205ENST00000550376 DAZAP1Q96EP5 407 aaKnown RBP16.13■□□□□ 0.17
PRDM4-205ENST00000550376 BEX4Q9NWD9 120 aaPredicted RBP16.13■□□□□ 0.17
PRDM4-205ENST00000550376 C19orf71A6NCJ1 209 aa16.12■□□□□ 0.17
PRDM4-205ENST00000550376 CAMPP49913 170 aa16.12■□□□□ 0.17
PRDM4-205ENST00000550376 PYY3Q5JQD4 70 aa16.12■□□□□ 0.17
PRDM4-205ENST00000550376 GDF5OSQ5U4N7 250 aa16.12■□□□□ 0.17
PRDM4-205ENST00000550376 TMEM136Q6ZRR5 245 aa16.12■□□□□ 0.17
PRDM4-205ENST00000550376 WFDC11Q8NEX6 87 aa16.12■□□□□ 0.17
PRDM4-205ENST00000550376 VGLL1Q99990 258 aa16.12■□□□□ 0.17
PRDM4-205ENST00000550376 IZUMO1RA6ND01 250 aa16.12■□□□□ 0.17
PRDM4-205ENST00000550376 CRIP1P50238 77 aa16.12■□□□□ 0.17
PRDM4-205ENST00000550376 SSBP4Q9BWG4 385 aaPredicted RBP16.12■□□□□ 0.17
PRDM4-205ENST00000550376 RPP21Q9H633 154 aaKnown RBP16.12■□□□□ 0.17
PRDM4-205ENST00000550376 UNC79Q9P2D8 2635 aa16.11■□□□□ 0.17
PRDM4-205ENST00000550376 FAM223BA6NKX1 122 aa16.11■□□□□ 0.17
PRDM4-205ENST00000550376 PRAC2D3DTV9 90 aa16.11■□□□□ 0.17
PRDM4-205ENST00000550376 SMAD7O15105 426 aaKnown RBP16.11■□□□□ 0.17
PRDM4-205ENST00000550376 FAM223AQ8IWN6 122 aa16.11■□□□□ 0.17
PRDM4-205ENST00000550376 TSKUQ8WUA8 353 aa16.11■□□□□ 0.17
PRDM4-205ENST00000550376 M0QZK8 103 aa16.11■□□□□ 0.17
PRDM4-205ENST00000550376 CHEK1O14757 476 aa16.11■□□□□ 0.17
PRDM4-205ENST00000550376 SSTP61278 116 aa16.11■□□□□ 0.17
PRDM4-205ENST00000550376 PDE6HQ13956 83 aa16.11■□□□□ 0.17
PRDM4-205ENST00000550376 OR5R1Q8NH85 324 aa16.11■□□□□ 0.17
PRDM4-205ENST00000550376 PGLYRP4Q96LB8 373 aa16.11■□□□□ 0.17
PRDM4-205ENST00000550376 PRSS22Q9GZN4 317 aa16.11■□□□□ 0.17
PRDM4-205ENST00000550376 TRAV9-1A0A075B6T8 112 aa16.1■□□□□ 0.17
PRDM4-205ENST00000550376 AMBPP02760 352 aa16.1■□□□□ 0.17
PRDM4-205ENST00000550376 PLA2G2AP14555 144 aa16.1■□□□□ 0.17
PRDM4-205ENST00000550376 METTL26Q96S19 204 aa16.1■□□□□ 0.17
PRDM4-205ENST00000550376 ERCC8Q13216 396 aa16.1■□□□□ 0.17
PRDM4-205ENST00000550376 TMEM75Q8N9X5 138 aa16.1■□□□□ 0.17
PRDM4-205ENST00000550376 OR4X2Q8NGF9 303 aa16.1■□□□□ 0.17
PRDM4-205ENST00000550376 PACRGQ96M98 296 aaPredicted RBP16.1■□□□□ 0.17
PRDM4-205ENST00000550376 ZNF331Q9NQX6 463 aaPredicted RBP16.1■□□□□ 0.17
PRDM4-205ENST00000550376 SETD2Q9BYW2 2564 aaPredicted RBP16.09■□□□□ 0.17
PRDM4-205ENST00000550376 K7EQM0 130 aa16.09■□□□□ 0.17
PRDM4-205ENST00000550376 CSN1S1P47710 185 aa16.09■□□□□ 0.17
PRDM4-205ENST00000550376 PSG9Q00887 426 aa16.09■□□□□ 0.17
PRDM4-205ENST00000550376 RELQ04864 619 aaPredicted RBP16.09■□□□□ 0.17
PRDM4-205ENST00000550376 GBGT1Q8N5D6 347 aa16.09■□□□□ 0.17
PRDM4-205ENST00000550376 OR2D3Q8NGH3 330 aa16.09■□□□□ 0.17
PRDM4-205ENST00000550376 TP53TG3Q9ULZ0 132 aa16.09■□□□□ 0.17
PRDM4-205ENST00000550376 NOTCH2Q04721 2471 aa16.09■□□□□ 0.17
PRDM4-205ENST00000550376 J3QLI3 93 aa16.09■□□□□ 0.17
PRDM4-205ENST00000550376 RAB9AP51151 201 aa16.09■□□□□ 0.17
PRDM4-205ENST00000550376 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.09■□□□□ 0.17
PRDM4-205ENST00000550376 GNB1LQ9BYB4 327 aa16.09■□□□□ 0.17
PRDM4-205ENST00000550376 SLAQ13239 276 aa16.08■□□□□ 0.17
PRDM4-205ENST00000550376 LCN12Q6JVE5 192 aa16.08■□□□□ 0.17
PRDM4-205ENST00000550376 HOXA3O43365 443 aaPredicted RBP16.08■□□□□ 0.16
PRDM4-205ENST00000550376 EDN2P20800 178 aa16.08■□□□□ 0.16
PRDM4-205ENST00000550376 IGKV3-7A0A075B6H7 116 aa16.07■□□□□ 0.16
PRDM4-205ENST00000550376 TMSB15BA0A087X1C1 80 aa16.07■□□□□ 0.16
PRDM4-205ENST00000550376 MTORP42345 2549 aa16.07■□□□□ 0.16
PRDM4-205ENST00000550376 IGLV1-40P01703 118 aa16.07■□□□□ 0.16
PRDM4-205ENST00000550376 CRISP2P16562 243 aa16.07■□□□□ 0.16
PRDM4-205ENST00000550376 COA6Q5JTJ3 125 aaKnown RBP16.07■□□□□ 0.16
PRDM4-205ENST00000550376 SMIM12Q96EX1 92 aa16.07■□□□□ 0.16
PRDM4-205ENST00000550376 FASNP49327 2511 aaKnown RBP16.07■□□□□ 0.16
PRDM4-205ENST00000550376 J3QKU1 62 aa16.06■□□□□ 0.16
PRDM4-205ENST00000550376 TPPP3Q9BW30 176 aa16.06■□□□□ 0.16
PRDM4-205ENST00000550376 ZNF492Q9P255 531 aa16.06■□□□□ 0.16
PRDM4-205ENST00000550376 ZFP30Q9Y2G7 519 aa16.05■□□□□ 0.16
PRDM4-205ENST00000550376 A8MWL6 223 aa16.05■□□□□ 0.16
PRDM4-205ENST00000550376 LINC00310P59036 64 aa16.05■□□□□ 0.16
PRDM4-205ENST00000550376 CFHR3Q02985 330 aa16.05■□□□□ 0.16
PRDM4-205ENST00000550376 LRRC75A-AS1Q8N1F1 130 aa16.05■□□□□ 0.16
PRDM4-205ENST00000550376 PSMG3-AS1Q96PY0 264 aa16.05■□□□□ 0.16
PRDM4-205ENST00000550376 ZNF705DP0CH99 300 aaPredicted RBP16.04■□□□□ 0.16
PRDM4-205ENST00000550376 ZNF705BP0CI00 300 aaPredicted RBP16.04■□□□□ 0.16
PRDM4-205ENST00000550376 TM4SF20Q53R12 229 aa16.04■□□□□ 0.16
PRDM4-205ENST00000550376 TRAV8-2A0A0B4J237 113 aa16.04■□□□□ 0.16
PRDM4-205ENST00000550376 CD33P20138 364 aa16.04■□□□□ 0.16
PRDM4-205ENST00000550376 SRIP30626 198 aa16.04■□□□□ 0.16
PRDM4-205ENST00000550376 DEFB1P60022 68 aa16.04■□□□□ 0.16
PRDM4-205ENST00000550376 HIST2H2BDQ6DRA6 164 aa16.04■□□□□ 0.16
PRDM4-205ENST00000550376 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.03■□□□□ 0.16
PRDM4-205ENST00000550376 MUC21A0A0G2JKD1 596 aa16.03■□□□□ 0.16
PRDM4-205ENST00000550376 MUC21A0A140T8X8 626 aa16.03■□□□□ 0.16
PRDM4-205ENST00000550376 SERF1AO75920 110 aa16.03■□□□□ 0.16
PRDM4-205ENST00000550376 FSHBP01225 129 aa16.03■□□□□ 0.16
PRDM4-205ENST00000550376 APCSP02743 223 aa16.03■□□□□ 0.16
PRDM4-205ENST00000550376 ZNF80P51504 273 aaPredicted RBP16.03■□□□□ 0.16
PRDM4-205ENST00000550376 MUC21Q5SSG8 566 aa16.03■□□□□ 0.16
PRDM4-205ENST00000550376 WDR73Q6P4I2 378 aa16.03■□□□□ 0.16
PRDM4-205ENST00000550376 USMG5Q96IX5 58 aa16.03■□□□□ 0.16
PRDM4-205ENST00000550376 Q6YL49 198 aa16.03■□□□□ 0.16
PRDM4-205ENST00000550376 C8orf86Q6ZUL3 223 aa16.03■□□□□ 0.16
PRDM4-205ENST00000550376 BAGE3Q86Y29 109 aa16.03■□□□□ 0.16
PRDM4-205ENST00000550376 U3KQE9 123 aa16.03■□□□□ 0.16
PRDM4-205ENST00000550376 AKAP9Q99996 3911 aa16.02■□□□□ 0.16
PRDM4-205ENST00000550376 SRD5A1P18405 259 aa16.02■□□□□ 0.16
PRDM4-205ENST00000550376 RPL11P62913 178 aaKnown RBP16.02■□□□□ 0.16
PRDM4-205ENST00000550376 CYB5R2Q6BCY4 276 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms