RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 UFSP1Q6NVU6 142 aa7.72□□□□□ -1.17
SMARCD1-205ENST00000548573 GTF2H5Q6ZYL4 71 aa7.72□□□□□ -1.17
SMARCD1-205ENST00000548573 SMIM15Q7Z3B0 74 aa7.72□□□□□ -1.17
SMARCD1-205ENST00000548573 BCL6BQ8N143 479 aaPredicted RBP7.72□□□□□ -1.17
SMARCD1-205ENST00000548573 FER1L6-AS1Q8NA97 138 aa7.72□□□□□ -1.17
SMARCD1-205ENST00000548573 PIFOQ8TCI5 191 aa7.72□□□□□ -1.17
SMARCD1-205ENST00000548573 IGFBPL1Q8WX77 278 aa7.72□□□□□ -1.17
SMARCD1-205ENST00000548573 VPS25Q9BRG1 176 aa7.72□□□□□ -1.17
SMARCD1-205ENST00000548573 ONECUT1Q9UBC0 465 aa7.72□□□□□ -1.17
SMARCD1-205ENST00000548573 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.72□□□□□ -1.17
SMARCD1-205ENST00000548573 LINC01546A6NGU7 62 aa7.72□□□□□ -1.17
SMARCD1-205ENST00000548573 NPYP01303 97 aa7.72□□□□□ -1.17
SMARCD1-205ENST00000548573 PRB4P10163 310 aaPredicted RBP7.72□□□□□ -1.17
SMARCD1-205ENST00000548573 EGR2P11161 476 aaPredicted RBP7.72□□□□□ -1.17
SMARCD1-205ENST00000548573 C5orf64Q2M2E5 130 aa7.72□□□□□ -1.17
SMARCD1-205ENST00000548573 KLF17Q5JT82 389 aaPredicted RBP7.72□□□□□ -1.17
SMARCD1-205ENST00000548573 Q8NA96 180 aa7.72□□□□□ -1.17
SMARCD1-205ENST00000548573 ABHD17AQ96GS6 310 aa7.72□□□□□ -1.17
SMARCD1-205ENST00000548573 AP1S3Q96PC3 154 aa7.72□□□□□ -1.17
SMARCD1-205ENST00000548573 SMG1Q96Q15 3661 aaKnown RBP7.72□□□□□ -1.17
SMARCD1-205ENST00000548573 BOD1L1Q8NFC6 3051 aa7.71□□□□□ -1.17
SMARCD1-205ENST00000548573 IGKV2-40A0A087WW87 121 aaPredicted RBP7.71□□□□□ -1.17
SMARCD1-205ENST00000548573 IGKV2D-40P01614 121 aaPredicted RBP7.71□□□□□ -1.17
SMARCD1-205ENST00000548573 TWIST1Q15672 202 aa7.71□□□□□ -1.17
SMARCD1-205ENST00000548573 ZNF562Q6V9R5 426 aa7.71□□□□□ -1.17
SMARCD1-205ENST00000548573 ADAMTSL5Q6ZMM2 481 aa7.71□□□□□ -1.17
SMARCD1-205ENST00000548573 TTC9CQ8N5M4 171 aa7.71□□□□□ -1.17
SMARCD1-205ENST00000548573 CNFNQ9BYD5 112 aa7.71□□□□□ -1.17
SMARCD1-205ENST00000548573 C21orf62Q9NYP8 219 aa7.71□□□□□ -1.17
SMARCD1-205ENST00000548573 THYN1Q9P016 225 aa7.71□□□□□ -1.17
SMARCD1-205ENST00000548573 ZGRF1Q86YA3 2104 aa7.71□□□□□ -1.18
SMARCD1-205ENST00000548573 NDUFS7O75251 213 aa7.71□□□□□ -1.18
SMARCD1-205ENST00000548573 SCGB2A1O75556 95 aa7.71□□□□□ -1.18
SMARCD1-205ENST00000548573 S100A7P31151 101 aa7.71□□□□□ -1.18
SMARCD1-205ENST00000548573 UQCRFS1P47985 274 aa7.71□□□□□ -1.18
SMARCD1-205ENST00000548573 ARPC1AQ92747 370 aa7.71□□□□□ -1.18
SMARCD1-205ENST00000548573 HILPDAQ9Y5L2 63 aa7.71□□□□□ -1.18
SMARCD1-205ENST00000548573 S4R3C0 116 aa7.71□□□□□ -1.18
SMARCD1-205ENST00000548573 ZNF80P51504 273 aaPredicted RBP7.7□□□□□ -1.18
SMARCD1-205ENST00000548573 LINC01559Q495D7 138 aa7.7□□□□□ -1.18
SMARCD1-205ENST00000548573 ZNF672Q499Z4 452 aaPredicted RBP7.7□□□□□ -1.18
SMARCD1-205ENST00000548573 MAP1LC3AQ9H492 121 aa7.7□□□□□ -1.18
SMARCD1-205ENST00000548573 ODF3BA8MYP8 253 aa7.69□□□□□ -1.18
SMARCD1-205ENST00000548573 K7EP34 96 aa7.69□□□□□ -1.18
SMARCD1-205ENST00000548573 M0R1W7 72 aa7.69□□□□□ -1.18
SMARCD1-205ENST00000548573 FXYD7P58549 80 aa7.69□□□□□ -1.18
SMARCD1-205ENST00000548573 KIR3DS1Q14943 382 aa7.69□□□□□ -1.18
SMARCD1-205ENST00000548573 ZNF575Q86XF7 245 aa7.69□□□□□ -1.18
SMARCD1-205ENST00000548573 RNF185Q96GF1 192 aa7.69□□□□□ -1.18
SMARCD1-205ENST00000548573 PSMG3-AS1Q96PY0 264 aa7.69□□□□□ -1.18
SMARCD1-205ENST00000548573 BDP1A6H8Y1 2624 aa7.69□□□□□ -1.18
SMARCD1-205ENST00000548573 A0A0G2JLM5 398 aa7.69□□□□□ -1.18
SMARCD1-205ENST00000548573 SMKR1H3BMG3 65 aa7.69□□□□□ -1.18
SMARCD1-205ENST00000548573 H3BUT2 72 aa7.69□□□□□ -1.18
SMARCD1-205ENST00000548573 IGHG4P01861 327 aa7.69□□□□□ -1.18
SMARCD1-205ENST00000548573 HES1Q14469 280 aa7.69□□□□□ -1.18
SMARCD1-205ENST00000548573 Q8TAT8 98 aa7.69□□□□□ -1.18
SMARCD1-205ENST00000548573 JMJD8Q96S16 334 aa7.69□□□□□ -1.18
SMARCD1-205ENST00000548573 VGLL1Q99990 258 aa7.69□□□□□ -1.18
SMARCD1-205ENST00000548573 ZMAT4Q9H898 229 aa7.69□□□□□ -1.18
SMARCD1-205ENST00000548573 SMAD5-AS1Q9Y6J3 95 aa7.69□□□□□ -1.18
SMARCD1-205ENST00000548573 OTOGLQ3ZCN5 2332 aa7.68□□□□□ -1.18
SMARCD1-205ENST00000548573 FABP5P3A8MUU1 101 aa7.68□□□□□ -1.18
SMARCD1-205ENST00000548573 CTSGP08311 255 aa7.68□□□□□ -1.18
SMARCD1-205ENST00000548573 PRTN3P24158 256 aa7.68□□□□□ -1.18
SMARCD1-205ENST00000548573 FCER1GP30273 86 aa7.68□□□□□ -1.18
SMARCD1-205ENST00000548573 NMUP48645 174 aa7.68□□□□□ -1.18
SMARCD1-205ENST00000548573 PCP2Q8IVA1 136 aa7.68□□□□□ -1.18
SMARCD1-205ENST00000548573 VKORC1Q9BQB6 163 aa7.68□□□□□ -1.18
SMARCD1-205ENST00000548573 NXT2Q9NPJ8 142 aaKnown RBP7.68□□□□□ -1.18
SMARCD1-205ENST00000548573 DKK2Q9UBU2 259 aa7.68□□□□□ -1.18
SMARCD1-205ENST00000548573 NDPQ00604 133 aa7.67□□□□□ -1.18
SMARCD1-205ENST00000548573 CCDC144NLQ6NUI1 221 aa7.67□□□□□ -1.18
SMARCD1-205ENST00000548573 PRSS57Q6UWY2 283 aa7.67□□□□□ -1.18
SMARCD1-205ENST00000548573 OR5A1Q8NGJ0 315 aa7.67□□□□□ -1.18
SMARCD1-205ENST00000548573 OR2K2Q8NGT1 345 aa7.67□□□□□ -1.18
SMARCD1-205ENST00000548573 CSTL1Q9H114 145 aa7.67□□□□□ -1.18
SMARCD1-205ENST00000548573 HIGD1BQ9P298 99 aa7.67□□□□□ -1.18
SMARCD1-205ENST00000548573 OOSP1A8MZH6 123 aa7.67□□□□□ -1.18
SMARCD1-205ENST00000548573 ORM1P02763 201 aa7.67□□□□□ -1.18
SMARCD1-205ENST00000548573 RAB9AP51151 201 aa7.67□□□□□ -1.18
SMARCD1-205ENST00000548573 Q8N6K4 173 aa7.67□□□□□ -1.18
SMARCD1-205ENST00000548573 ZZEF1O43149 2961 aa7.67□□□□□ -1.18
SMARCD1-205ENST00000548573 ROS1P08922 2347 aa7.66□□□□□ -1.18
SMARCD1-205ENST00000548573 A0A1W2PPM0 123 aa7.66□□□□□ -1.18
SMARCD1-205ENST00000548573 A0A1W2PRD5 423 aa7.66□□□□□ -1.18
SMARCD1-205ENST00000548573 A0A1W2PRF3 423 aa7.66□□□□□ -1.18
SMARCD1-205ENST00000548573 A0A1W2PRM7 423 aa7.66□□□□□ -1.18
SMARCD1-205ENST00000548573 RBAKDNA6NC62 111 aa7.66□□□□□ -1.18
SMARCD1-205ENST00000548573 TNFRSF6BO95407 300 aa7.66□□□□□ -1.18
SMARCD1-205ENST00000548573 LEPP41159 167 aa7.66□□□□□ -1.18
SMARCD1-205ENST00000548573 KLRD1Q13241 179 aa7.66□□□□□ -1.18
SMARCD1-205ENST00000548573 EBI3Q14213 229 aa7.66□□□□□ -1.18
SMARCD1-205ENST00000548573 ODF1Q14990 250 aa7.66□□□□□ -1.18
SMARCD1-205ENST00000548573 TIMD4Q96H15 378 aa7.66□□□□□ -1.18
SMARCD1-205ENST00000548573 MEGF9Q9H1U4 602 aa7.66□□□□□ -1.18
SMARCD1-205ENST00000548573 MSRB1Q9NZV6 116 aa7.66□□□□□ -1.18
SMARCD1-205ENST00000548573 SMPXQ9UHP9 88 aa7.66□□□□□ -1.18
SMARCD1-205ENST00000548573 HHLA3Q9XRX5 114 aa7.66□□□□□ -1.18
SMARCD1-205ENST00000548573 ABCA1O95477 2261 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms