RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 OR5C1Q8NGR4 320 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 OR10J5Q8NHC4 309 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 PLEKHB2Q96CS7 222 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 DNAJC30Q96LL9 226 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 ZNF2Q9BSG1 426 aaPredicted RBP2.45□□□□□ -2.02
SCAF11-210ENST00000547654 EFCAB11Q9BUY7 163 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 RSPO3Q9BXY4 272 aaPredicted RBP2.45□□□□□ -2.02
SCAF11-210ENST00000547654 AICDAQ9GZX7 198 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 TAS2R7Q9NYW3 318 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 CKLFQ9UBR5 152 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 TP73-AS1Q9UF72 201 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 NAT8Q9UHE5 227 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 AMMECR1Q9Y4X0 333 aaPredicted RBP2.45□□□□□ -2.02
SCAF11-210ENST00000547654 EPPK1P58107 5090 aaKnown RBP2.45□□□□□ -2.02
SCAF11-210ENST00000547654 RP1L1Q8IWN7 2480 aaPredicted RBP2.45□□□□□ -2.02
SCAF11-210ENST00000547654 CHD5Q8TDI0 1954 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 COL4A2P08572 1712 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 LAMA4Q16363 1823 aa2.45□□□□□ -2.02
SCAF11-210ENST00000547654 TNRC6BQ9UPQ9 1833 aaKnown RBP2.45□□□□□ -2.02
SCAF11-210ENST00000547654 TGP01266 2768 aa2.44□□□□□ -2.02
SCAF11-210ENST00000547654 ANK2Q01484 3957 aa2.44□□□□□ -2.02
SCAF11-210ENST00000547654 C1orf196B1AJZ1 125 aa2.44□□□□□ -2.02
SCAF11-210ENST00000547654 CYB5BO43169 146 aa2.44□□□□□ -2.02
SCAF11-210ENST00000547654 CPSF4O95639 269 aaKnown RBP2.44□□□□□ -2.02
SCAF11-210ENST00000547654 IGHV3-7P01780 117 aa2.44□□□□□ -2.02
SCAF11-210ENST00000547654 IGKV3-11P04433 115 aa2.44□□□□□ -2.02
SCAF11-210ENST00000547654 MOBPQ13875 183 aa2.44□□□□□ -2.02
SCAF11-210ENST00000547654 SMCO1Q147U7 214 aa2.44□□□□□ -2.02
SCAF11-210ENST00000547654 MSRB3Q8IXL7 192 aa2.44□□□□□ -2.02
SCAF11-210ENST00000547654 EXOC3-AS1Q8N2X6 119 aa2.44□□□□□ -2.02
SCAF11-210ENST00000547654 IMMP2LQ96T52 175 aa2.44□□□□□ -2.02
SCAF11-210ENST00000547654 TUBA4BQ9H853 241 aa2.44□□□□□ -2.02
SCAF11-210ENST00000547654 RNF122Q9H9V4 155 aa2.44□□□□□ -2.02
SCAF11-210ENST00000547654 CYTL1Q9NRR1 136 aa2.44□□□□□ -2.02
SCAF11-210ENST00000547654 MRPL16Q9NX20 251 aaKnown RBP2.44□□□□□ -2.02
SCAF11-210ENST00000547654 TIMM9Q9Y5J7 89 aa2.44□□□□□ -2.02
SCAF11-210ENST00000547654 PDCD11Q14690 1871 aaKnown RBP2.43□□□□□ -2.02
SCAF11-210ENST00000547654 RYR1P21817 5038 aa2.43□□□□□ -2.02
SCAF11-210ENST00000547654 PRORSD1PA6NEY8 169 aa2.43□□□□□ -2.02
SCAF11-210ENST00000547654 C5orf67F2Z3F1 127 aa2.43□□□□□ -2.02
SCAF11-210ENST00000547654 H3BT86 120 aa2.43□□□□□ -2.02
SCAF11-210ENST00000547654 SLC22A1O15245 554 aa2.43□□□□□ -2.02
SCAF11-210ENST00000547654 HMGN1P05114 100 aa2.43□□□□□ -2.02
SCAF11-210ENST00000547654 OGNP20774 298 aaKnown RBP2.43□□□□□ -2.02
SCAF11-210ENST00000547654 SRP14P37108 136 aaKnown RBP2.43□□□□□ -2.02
SCAF11-210ENST00000547654 PI4KAP42356 2102 aa2.43□□□□□ -2.02
SCAF11-210ENST00000547654 EIF5AP63241 154 aaKnown RBP2.43□□□□□ -2.02
SCAF11-210ENST00000547654 BAMBIQ13145 260 aa2.43□□□□□ -2.02
SCAF11-210ENST00000547654 SURF2Q15527 256 aaPredicted RBP2.43□□□□□ -2.02
SCAF11-210ENST00000547654 RRN3P1Q2M238 152 aa2.43□□□□□ -2.02
SCAF11-210ENST00000547654 PYDC2Q56P42 97 aa2.43□□□□□ -2.02
SCAF11-210ENST00000547654 NUP35Q8NFH5 326 aa2.43□□□□□ -2.02
SCAF11-210ENST00000547654 OR9Q1Q8NGQ5 310 aa2.43□□□□□ -2.02
SCAF11-210ENST00000547654 LZICQ8WZA0 190 aa2.43□□□□□ -2.02
SCAF11-210ENST00000547654 RMND5BQ96G75 393 aaPredicted RBP2.43□□□□□ -2.02
SCAF11-210ENST00000547654 GINS4Q9BRT9 223 aa2.43□□□□□ -2.02
SCAF11-210ENST00000547654 OR2J1Q9GZK6 312 aa2.43□□□□□ -2.02
SCAF11-210ENST00000547654 OR8D2Q9GZM6 311 aa2.43□□□□□ -2.02
SCAF11-210ENST00000547654 C6orf62Q9GZU0 229 aaPredicted RBP2.43□□□□□ -2.02
SCAF11-210ENST00000547654 PCTPQ9UKL6 214 aa2.43□□□□□ -2.02
SCAF11-210ENST00000547654 ERGIC3Q9Y282 383 aa2.43□□□□□ -2.02
SCAF11-210ENST00000547654 TIMM22Q9Y584 194 aa2.43□□□□□ -2.02
SCAF11-210ENST00000547654 TACC2O95359 2948 aa2.43□□□□□ -2.02
SCAF11-210ENST00000547654 GOLGA4Q13439 2230 aaKnown RBP2.42□□□□□ -2.02
SCAF11-210ENST00000547654 CSPG4Q6UVK1 2322 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 COL6A5A8TX70 2615 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 THADAQ6YHU6 1953 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 LRCOL1A6NCL2 159 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 ARL5CA6NH57 179 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 C11orf86A6NJI1 115 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 BUB1B-PAK6H3BSN5 160 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 ZNF73O43830 326 aaPredicted RBP2.42□□□□□ -2.02
SCAF11-210ENST00000547654 DHFRP00374 187 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 BPGMP07738 259 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 OR10J4P0C629 311 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 PSMB8P28062 276 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 EIF2B2P49770 351 aaKnown RBP2.42□□□□□ -2.02
SCAF11-210ENST00000547654 LINC00315P59091 139 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 CDC42P60953 191 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 LTC4SQ16873 150 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 DEFB134Q4QY38 66 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 BCL2L15Q5TBC7 163 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 Q6ZS52 159 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 MIR17HGQ75NE6 70 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 OR8D4Q8NGM9 314 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 C11orf40Q8WZ69 217 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 SCGB3A1Q96QR1 104 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 HSPB9Q9BQS6 159 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 TM2D3Q9BRN9 247 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 OSTCQ9NRP0 149 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 MINOS1-NBL1R4GNA1 71 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 HSPE1-MOB4S4R3N1 261 aa2.42□□□□□ -2.02
SCAF11-210ENST00000547654 DCHS2Q6V1P9 2916 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 ACANP16112 2415 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 DOCK6Q96HP0 2047 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 HYDINQ4G0P3 5121 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 A0A087X0T9 212 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 TRGV5A0A0B4J1U4 118 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 TAX1BP3O14907 124 aa2.41□□□□□ -2.02
SCAF11-210ENST00000547654 GNRH2O43555 120 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms