RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 TMEM155Q4W5P6 130 aa13.54□□□□□ -0.24
C2CD3-213ENST00000539061 ZNF491Q8N8L2 437 aa13.54□□□□□ -0.24
C2CD3-213ENST00000539061 NUP37Q8NFH4 326 aa13.54□□□□□ -0.24
C2CD3-213ENST00000539061 RNF125Q96EQ8 232 aa13.54□□□□□ -0.24
C2CD3-213ENST00000539061 TM2D2Q9BX73 214 aa13.54□□□□□ -0.24
C2CD3-213ENST00000539061 CEACAM4O75871 244 aa13.54□□□□□ -0.24
C2CD3-213ENST00000539061 LOXP28300 417 aaPredicted RBP13.54□□□□□ -0.24
C2CD3-213ENST00000539061 PDE6HQ13956 83 aa13.54□□□□□ -0.24
C2CD3-213ENST00000539061 TTTY13Q9BZ97 58 aa13.54□□□□□ -0.24
C2CD3-213ENST00000539061 NHP2Q9NX24 153 aaKnown RBP13.54□□□□□ -0.24
C2CD3-213ENST00000539061 TRBV25-1A0A075B6N4 114 aa13.53□□□□□ -0.24
C2CD3-213ENST00000539061 GAGE12HA6NDE8 117 aa13.53□□□□□ -0.24
C2CD3-213ENST00000539061 IGKCP01834 107 aa13.53□□□□□ -0.24
C2CD3-213ENST00000539061 IL4P05112 153 aa13.53□□□□□ -0.24
C2CD3-213ENST00000539061 PRSS1P07477 247 aa13.53□□□□□ -0.24
C2CD3-213ENST00000539061 FCER1GP30273 86 aa13.53□□□□□ -0.24
C2CD3-213ENST00000539061 LEPP41159 167 aa13.53□□□□□ -0.24
C2CD3-213ENST00000539061 C22orf34Q6ZV56 151 aa13.53□□□□□ -0.24
C2CD3-213ENST00000539061 CEND1Q8N111 149 aa13.53□□□□□ -0.24
C2CD3-213ENST00000539061 EVI2AP22794 236 aa13.53□□□□□ -0.24
C2CD3-213ENST00000539061 ASCL5Q7RTU5 278 aa13.53□□□□□ -0.24
C2CD3-213ENST00000539061 CCL17Q92583 94 aa13.53□□□□□ -0.24
C2CD3-213ENST00000539061 FBXL15Q9H469 300 aa13.53□□□□□ -0.24
C2CD3-213ENST00000539061 TSSC4Q9Y5U2 329 aaPredicted RBP13.53□□□□□ -0.24
C2CD3-213ENST00000539061 LINC01546A6NGU7 62 aa13.52□□□□□ -0.24
C2CD3-213ENST00000539061 VSTM5A8MXK1 200 aa13.52□□□□□ -0.24
C2CD3-213ENST00000539061 E9PLD3 99 aa13.52□□□□□ -0.24
C2CD3-213ENST00000539061 TNFRSF13BO14836 293 aaPredicted RBP13.52□□□□□ -0.24
C2CD3-213ENST00000539061 COX8CQ7Z4L0 72 aa13.52□□□□□ -0.24
C2CD3-213ENST00000539061 S100A7AQ86SG5 101 aa13.52□□□□□ -0.24
C2CD3-213ENST00000539061 SMPXQ9UHP9 88 aa13.52□□□□□ -0.24
C2CD3-213ENST00000539061 ZNF318Q5VUA4 2279 aa13.52□□□□□ -0.25
C2CD3-213ENST00000539061 K7EIM0 57 aa13.52□□□□□ -0.25
C2CD3-213ENST00000539061 ZNF207O43670 478 aaKnown RBP13.52□□□□□ -0.25
C2CD3-213ENST00000539061 SRSF1Q07955 248 aaKnown RBP eCLIP13.52□□□□□ -0.25
C2CD3-213ENST00000539061 LINC01559Q495D7 138 aa13.52□□□□□ -0.25
C2CD3-213ENST00000539061 FOXI2Q6ZQN5 318 aa13.52□□□□□ -0.25
C2CD3-213ENST00000539061 SPANXB1Q9NS25 103 aaPredicted RBP13.52□□□□□ -0.25
C2CD3-213ENST00000539061 CTSZQ9UBR2 303 aa13.52□□□□□ -0.25
C2CD3-213ENST00000539061 EGR2P11161 476 aaPredicted RBP13.51□□□□□ -0.25
C2CD3-213ENST00000539061 FAM27E3Q08E93 113 aa13.51□□□□□ -0.25
C2CD3-213ENST00000539061 A0A1B0GV72 72 aa13.51□□□□□ -0.25
C2CD3-213ENST00000539061 WFDC2Q14508 124 aa13.51□□□□□ -0.25
C2CD3-213ENST00000539061 NXT2Q9NPJ8 142 aaKnown RBP13.51□□□□□ -0.25
C2CD3-213ENST00000539061 IGHV1-3A0A0C4DH29 117 aa13.5□□□□□ -0.25
C2CD3-213ENST00000539061 A0A1W2PRD5 423 aa13.5□□□□□ -0.25
C2CD3-213ENST00000539061 A0A1W2PRF3 423 aa13.5□□□□□ -0.25
C2CD3-213ENST00000539061 A0A1W2PRM7 423 aa13.5□□□□□ -0.25
C2CD3-213ENST00000539061 BMI1P35226 326 aa13.5□□□□□ -0.25
C2CD3-213ENST00000539061 GTSCR1Q86UQ5 136 aa13.5□□□□□ -0.25
C2CD3-213ENST00000539061 PRR25Q96S07 402 aa13.5□□□□□ -0.25
C2CD3-213ENST00000539061 FAM215AQ9Y5M1 114 aa13.5□□□□□ -0.25
C2CD3-213ENST00000539061 IGLL5B9A064 214 aa13.5□□□□□ -0.25
C2CD3-213ENST00000539061 DPM2O94777 84 aa13.5□□□□□ -0.25
C2CD3-213ENST00000539061 IGLC6P0CF74 106 aa13.5□□□□□ -0.25
C2CD3-213ENST00000539061 SRSF6Q13247 344 aaKnown RBP13.5□□□□□ -0.25
C2CD3-213ENST00000539061 RNF185Q96GF1 192 aa13.5□□□□□ -0.25
C2CD3-213ENST00000539061 SRSF8Q9BRL6 282 aaKnown RBP13.5□□□□□ -0.25
C2CD3-213ENST00000539061 ATP5LO75964 103 aa13.49□□□□□ -0.25
C2CD3-213ENST00000539061 HLA-DRB4P13762 266 aa13.49□□□□□ -0.25
C2CD3-213ENST00000539061 PRSS33Q8NF86 280 aa13.49□□□□□ -0.25
C2CD3-213ENST00000539061 HLA-DRB4X5D2U9 266 aa13.49□□□□□ -0.25
C2CD3-213ENST00000539061 ADIPOQQ15848 244 aa13.49□□□□□ -0.25
C2CD3-213ENST00000539061 KLF17Q5JT82 389 aaPredicted RBP13.49□□□□□ -0.25
C2CD3-213ENST00000539061 ZC2HC1BQ5TFG8 222 aa13.49□□□□□ -0.25
C2CD3-213ENST00000539061 TMEM108Q6UXF1 575 aa13.49□□□□□ -0.25
C2CD3-213ENST00000539061 ZNF479Q96JC4 524 aa13.49□□□□□ -0.25
C2CD3-213ENST00000539061 FOXC2Q99958 501 aa13.49□□□□□ -0.25
C2CD3-213ENST00000539061 IGKV2-40A0A087WW87 121 aaPredicted RBP13.48□□□□□ -0.25
C2CD3-213ENST00000539061 IGKV2D-40P01614 121 aaPredicted RBP13.48□□□□□ -0.25
C2CD3-213ENST00000539061 SPATA25Q9BR10 227 aa13.48□□□□□ -0.25
C2CD3-213ENST00000539061 OTOGLQ3ZCN5 2332 aa13.48□□□□□ -0.25
C2CD3-213ENST00000539061 CNIH1O95406 144 aa13.48□□□□□ -0.25
C2CD3-213ENST00000539061 ATP6V0BQ99437 205 aa13.48□□□□□ -0.25
C2CD3-213ENST00000539061 DMXL1Q9Y485 3027 aa13.48□□□□□ -0.25
C2CD3-213ENST00000539061 NPIPB5A8MRT5 1133 aa13.48□□□□□ -0.25
C2CD3-213ENST00000539061 TNFRSF6BO95407 300 aa13.48□□□□□ -0.25
C2CD3-213ENST00000539061 KAAG1Q9UBP8 84 aa13.48□□□□□ -0.25
C2CD3-213ENST00000539061 IGLV1-47P01700 117 aa13.47□□□□□ -0.25
C2CD3-213ENST00000539061 TAL2Q16559 108 aa13.47□□□□□ -0.25
C2CD3-213ENST00000539061 MSRB1Q9NZV6 116 aa13.47□□□□□ -0.25
C2CD3-213ENST00000539061 TMEM8BA6NDV4 472 aa13.47□□□□□ -0.25
C2CD3-213ENST00000539061 MALRD1Q5VYJ5 2156 aa13.46□□□□□ -0.25
C2CD3-213ENST00000539061 BUB1B-PAK6H3BSN5 160 aa13.46□□□□□ -0.25
C2CD3-213ENST00000539061 ZNF80P51504 273 aaPredicted RBP13.46□□□□□ -0.25
C2CD3-213ENST00000539061 TMEM158Q8WZ71 300 aa13.46□□□□□ -0.25
C2CD3-213ENST00000539061 RAB1BQ9H0U4 201 aa13.46□□□□□ -0.25
C2CD3-213ENST00000539061 H3BMG7 143 aa13.46□□□□□ -0.26
C2CD3-213ENST00000539061 GAS8-AS1O95177 125 aa13.46□□□□□ -0.26
C2CD3-213ENST00000539061 DLX1P56177 255 aa13.46□□□□□ -0.26
C2CD3-213ENST00000539061 C12orf74Q32Q52 190 aa13.46□□□□□ -0.26
C2CD3-213ENST00000539061 ETDBQ3ZM63 59 aa13.46□□□□□ -0.26
C2CD3-213ENST00000539061 SPAG8Q99932 426 aaPredicted RBP13.46□□□□□ -0.26
C2CD3-213ENST00000539061 CNFNQ9BYD5 112 aa13.46□□□□□ -0.26
C2CD3-213ENST00000539061 SRSF2Q01130 221 aaKnown RBP13.45□□□□□ -0.26
C2CD3-213ENST00000539061 RNF5Q99942 180 aa13.45□□□□□ -0.26
C2CD3-213ENST00000539061 TMEM160Q9NX00 188 aa13.45□□□□□ -0.26
C2CD3-213ENST00000539061 ORM1P02763 201 aa13.45□□□□□ -0.26
C2CD3-213ENST00000539061 TCF15Q12870 199 aa13.45□□□□□ -0.26
C2CD3-213ENST00000539061 SH2D6Q7Z4S9 175 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms