RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 C18orf15Q96N68 181 aa14.66□□□□□ -0.06
SFSWAP-207ENST00000538548 C8orf49Q96NF6 230 aa14.66□□□□□ -0.06
SFSWAP-207ENST00000538548 SPANXB1Q9NS25 103 aaPredicted RBP14.66□□□□□ -0.06
SFSWAP-207ENST00000538548 HHLA3Q9XRX5 114 aa14.66□□□□□ -0.06
SFSWAP-207ENST00000538548 C3orf36Q3SXR2 165 aa14.66□□□□□ -0.06
SFSWAP-207ENST00000538548 TM2D2Q9BX73 214 aa14.66□□□□□ -0.06
SFSWAP-207ENST00000538548 TMSB15BA0A087X1C1 80 aa14.65□□□□□ -0.06
SFSWAP-207ENST00000538548 ATP6V0BQ99437 205 aa14.65□□□□□ -0.06
SFSWAP-207ENST00000538548 SPATA25Q9BR10 227 aa14.65□□□□□ -0.06
SFSWAP-207ENST00000538548 ZNF207O43670 478 aaKnown RBP14.65□□□□□ -0.06
SFSWAP-207ENST00000538548 ODF1Q14990 250 aa14.65□□□□□ -0.06
SFSWAP-207ENST00000538548 WFDC3Q8IUB2 231 aa14.65□□□□□ -0.06
SFSWAP-207ENST00000538548 VSTM5A8MXK1 200 aa14.64□□□□□ -0.07
SFSWAP-207ENST00000538548 E9PLD3 99 aa14.64□□□□□ -0.07
SFSWAP-207ENST00000538548 CCL11P51671 97 aa14.64□□□□□ -0.07
SFSWAP-207ENST00000538548 ZNF562Q6V9R5 426 aa14.64□□□□□ -0.07
SFSWAP-207ENST00000538548 NHP2Q9NX24 153 aaKnown RBP14.64□□□□□ -0.07
SFSWAP-207ENST00000538548 TRBV25-1A0A075B6N4 114 aa14.64□□□□□ -0.07
SFSWAP-207ENST00000538548 SMKR1H3BMG3 65 aa14.64□□□□□ -0.07
SFSWAP-207ENST00000538548 H3BRN7 92 aa14.64□□□□□ -0.07
SFSWAP-207ENST00000538548 FCN3O75636 299 aa14.64□□□□□ -0.07
SFSWAP-207ENST00000538548 RBP4P02753 201 aa14.64□□□□□ -0.07
SFSWAP-207ENST00000538548 CEND1Q8N111 149 aa14.64□□□□□ -0.07
SFSWAP-207ENST00000538548 RELNP78509 3460 aa14.63□□□□□ -0.07
SFSWAP-207ENST00000538548 IGHV3-72A0A0B4J1Y9 119 aa14.63□□□□□ -0.07
SFSWAP-207ENST00000538548 IGKV1-17P01599 117 aa14.63□□□□□ -0.07
SFSWAP-207ENST00000538548 TTTY13Q9BZ97 58 aa14.63□□□□□ -0.07
SFSWAP-207ENST00000538548 A0A1W2PRD5 423 aa14.63□□□□□ -0.07
SFSWAP-207ENST00000538548 A0A1W2PRF3 423 aa14.63□□□□□ -0.07
SFSWAP-207ENST00000538548 A0A1W2PRM7 423 aa14.63□□□□□ -0.07
SFSWAP-207ENST00000538548 I3L2K1 104 aa14.63□□□□□ -0.07
SFSWAP-207ENST00000538548 M0R3E3 92 aa14.63□□□□□ -0.07
SFSWAP-207ENST00000538548 SH2D1AO60880 128 aa14.63□□□□□ -0.07
SFSWAP-207ENST00000538548 CRYGBP07316 175 aa14.63□□□□□ -0.07
SFSWAP-207ENST00000538548 PRB4P10163 310 aaPredicted RBP14.63□□□□□ -0.07
SFSWAP-207ENST00000538548 LINC01546A6NGU7 62 aa14.62□□□□□ -0.07
SFSWAP-207ENST00000538548 EVI2AP22794 236 aa14.62□□□□□ -0.07
SFSWAP-207ENST00000538548 SRSF1Q07955 248 aaKnown RBP eCLIP14.62□□□□□ -0.075e-8■■■□□ 18.4
SFSWAP-207ENST00000538548 WFDC2Q14508 124 aa14.62□□□□□ -0.07
SFSWAP-207ENST00000538548 SIGLEC9Q9Y336 463 aa14.62□□□□□ -0.07
SFSWAP-207ENST00000538548 TEX22C9J3V5 150 aa14.62□□□□□ -0.07
SFSWAP-207ENST00000538548 BSNQ9UPA5 3926 aa14.62□□□□□ -0.07
SFSWAP-207ENST00000538548 IGKCP01834 107 aa14.62□□□□□ -0.07
SFSWAP-207ENST00000538548 HLA-DRB4P13762 266 aa14.62□□□□□ -0.07
SFSWAP-207ENST00000538548 WT1P19544 449 aaPredicted RBP14.62□□□□□ -0.07
SFSWAP-207ENST00000538548 CCL8P80075 99 aa14.62□□□□□ -0.07
SFSWAP-207ENST00000538548 PIP4P1Q86T03 277 aa14.62□□□□□ -0.07
SFSWAP-207ENST00000538548 MAP1LC3AQ9H492 121 aa14.62□□□□□ -0.07
SFSWAP-207ENST00000538548 HLA-DRB4X5D2U9 266 aa14.62□□□□□ -0.07
SFSWAP-207ENST00000538548 IGF2RP11717 2491 aa14.61□□□□□ -0.07
SFSWAP-207ENST00000538548 IGLL5B9A064 214 aa14.61□□□□□ -0.07
SFSWAP-207ENST00000538548 MRPS12O15235 138 aaKnown RBP14.61□□□□□ -0.07
SFSWAP-207ENST00000538548 CNTFRP26992 372 aa14.61□□□□□ -0.07
SFSWAP-207ENST00000538548 TWIST1Q15672 202 aa14.61□□□□□ -0.07
SFSWAP-207ENST00000538548 LINC01559Q495D7 138 aa14.61□□□□□ -0.07
SFSWAP-207ENST00000538548 ZNF474Q6S9Z5 364 aaPredicted RBP14.61□□□□□ -0.07
SFSWAP-207ENST00000538548 SMG1Q96Q15 3661 aaKnown RBP14.61□□□□□ -0.07
SFSWAP-207ENST00000538548 FCER1GP30273 86 aa14.61□□□□□ -0.07
SFSWAP-207ENST00000538548 SEM1Q6ZVN7 128 aa14.61□□□□□ -0.07
SFSWAP-207ENST00000538548 CEACAM4O75871 244 aa14.6□□□□□ -0.07
SFSWAP-207ENST00000538548 LEPP41159 167 aa14.6□□□□□ -0.07
SFSWAP-207ENST00000538548 PLGLAQ15195 96 aa14.6□□□□□ -0.07
SFSWAP-207ENST00000538548 CCDC144NLQ6NUI1 221 aa14.6□□□□□ -0.07
SFSWAP-207ENST00000538548 ZNF479Q96JC4 524 aa14.6□□□□□ -0.07
SFSWAP-207ENST00000538548 AAMDCQ9H7C9 122 aa14.6□□□□□ -0.07
SFSWAP-207ENST00000538548 MBD3L4A6NDZ8 208 aaPredicted RBP14.6□□□□□ -0.07
SFSWAP-207ENST00000538548 MBD3L3A6NE82 208 aaPredicted RBP14.6□□□□□ -0.07
SFSWAP-207ENST00000538548 MBD3L5A6NJ08 208 aaPredicted RBP14.6□□□□□ -0.07
SFSWAP-207ENST00000538548 PRSS1P07477 247 aa14.6□□□□□ -0.07
SFSWAP-207ENST00000538548 PDE6HQ13956 83 aa14.6□□□□□ -0.07
SFSWAP-207ENST00000538548 COX8CQ7Z4L0 72 aa14.6□□□□□ -0.07
SFSWAP-207ENST00000538548 PPP1R27Q86WC6 154 aa14.6□□□□□ -0.07
SFSWAP-207ENST00000538548 MBD3L2Q8NHZ7 208 aaPredicted RBP14.6□□□□□ -0.07
SFSWAP-207ENST00000538548 CLUHP3Q96NS8 147 aa14.6□□□□□ -0.07
SFSWAP-207ENST00000538548 SPAG8Q99932 426 aaPredicted RBP14.59□□□□□ -0.07
SFSWAP-207ENST00000538548 KLF17Q5JT82 389 aaPredicted RBP14.59□□□□□ -0.07
SFSWAP-207ENST00000538548 NDUFB3O43676 98 aa14.58□□□□□ -0.08
SFSWAP-207ENST00000538548 DPM2O94777 84 aa14.58□□□□□ -0.08
SFSWAP-207ENST00000538548 DLX6P56179 175 aa14.58□□□□□ -0.08
SFSWAP-207ENST00000538548 ETDBQ3ZM63 59 aa14.58□□□□□ -0.08
SFSWAP-207ENST00000538548 ZC2HC1BQ5TFG8 222 aa14.58□□□□□ -0.08
SFSWAP-207ENST00000538548 GTSCR1Q86UQ5 136 aa14.58□□□□□ -0.08
SFSWAP-207ENST00000538548 ZNF491Q8N8L2 437 aa14.58□□□□□ -0.08
SFSWAP-207ENST00000538548 RNF125Q96EQ8 232 aa14.58□□□□□ -0.08
SFSWAP-207ENST00000538548 NXT2Q9NPJ8 142 aaKnown RBP14.58□□□□□ -0.08
SFSWAP-207ENST00000538548 CHD8Q9HCK8 2581 aa14.58□□□□□ -0.08
SFSWAP-207ENST00000538548 TAL2Q16559 108 aa14.58□□□□□ -0.08
SFSWAP-207ENST00000538548 TRAV17A0A0B4J275 112 aa14.57□□□□□ -0.08
SFSWAP-207ENST00000538548 NPIPB5A8MRT5 1133 aa14.57□□□□□ -0.08
SFSWAP-207ENST00000538548 H3BMG7 143 aa14.57□□□□□ -0.08
SFSWAP-207ENST00000538548 IGLC6P0CF74 106 aa14.57□□□□□ -0.08
SFSWAP-207ENST00000538548 FDCSPQ8NFU4 85 aa14.57□□□□□ -0.08
SFSWAP-207ENST00000538548 ARPC1AQ92747 370 aa14.57□□□□□ -0.08
SFSWAP-207ENST00000538548 ATP5LO75964 103 aa14.57□□□□□ -0.08
SFSWAP-207ENST00000538548 EGR2P11161 476 aaPredicted RBP14.57□□□□□ -0.08
SFSWAP-207ENST00000538548 SH2D6Q7Z4S9 175 aa14.57□□□□□ -0.08
SFSWAP-207ENST00000538548 S100A7AQ86SG5 101 aa14.57□□□□□ -0.08
SFSWAP-207ENST00000538548 ZNF502Q8TBZ5 544 aa14.57□□□□□ -0.08
SFSWAP-207ENST00000538548 RNF185Q96GF1 192 aa14.57□□□□□ -0.08
SFSWAP-207ENST00000538548 ADGRG4Q8IZF6 3080 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms