RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 LOC102724200A0A096LPH7 203 aaPredicted RBP7.18□□□□□ -1.26
UBE3B-207ENST00000537063 IGKV2D-40P01614 121 aaPredicted RBP7.18□□□□□ -1.26
UBE3B-207ENST00000537063 RELQ04864 619 aaPredicted RBP7.18□□□□□ -1.26
UBE3B-207ENST00000537063 CLEC19AQ6UXS0 136 aa7.18□□□□□ -1.26
UBE3B-207ENST00000537063 PRR25Q96S07 402 aa7.18□□□□□ -1.26
UBE3B-207ENST00000537063 NDUFAF3Q9BU61 184 aa7.18□□□□□ -1.26
UBE3B-207ENST00000537063 IGHG2P01859 326 aa7.18□□□□□ -1.26
UBE3B-207ENST00000537063 AMTP48728 403 aa7.18□□□□□ -1.26
UBE3B-207ENST00000537063 ATP5G2Q06055 141 aa7.18□□□□□ -1.26
UBE3B-207ENST00000537063 ASCL2Q99929 193 aa7.18□□□□□ -1.26
UBE3B-207ENST00000537063 ZNF580Q9UK33 172 aa7.18□□□□□ -1.26
UBE3B-207ENST00000537063 A0A1B0GUT8 65 aa7.17□□□□□ -1.26
UBE3B-207ENST00000537063 CD33P20138 364 aa7.17□□□□□ -1.26
UBE3B-207ENST00000537063 PPIFP30405 207 aaKnown RBP7.17□□□□□ -1.26
UBE3B-207ENST00000537063 FAM162BQ5T6X4 162 aa7.17□□□□□ -1.26
UBE3B-207ENST00000537063 ZNF493Q6ZR52 646 aa7.17□□□□□ -1.26
UBE3B-207ENST00000537063 MRPL53Q96EL3 112 aaKnown RBP7.17□□□□□ -1.26
UBE3B-207ENST00000537063 C20orf144Q9BQM9 153 aa7.17□□□□□ -1.26
UBE3B-207ENST00000537063 SLC50A1Q9BRV3 221 aa7.17□□□□□ -1.26
UBE3B-207ENST00000537063 M0QZK8 103 aa7.17□□□□□ -1.26
UBE3B-207ENST00000537063 SH2D1AO60880 128 aa7.17□□□□□ -1.26
UBE3B-207ENST00000537063 GATA3P23771 443 aa7.17□□□□□ -1.26
UBE3B-207ENST00000537063 ZNF575Q86XF7 245 aa7.17□□□□□ -1.26
UBE3B-207ENST00000537063 CT45A10P0DMU9 189 aa7.16□□□□□ -1.26
UBE3B-207ENST00000537063 LURAP1LQ8IV03 231 aa7.16□□□□□ -1.26
UBE3B-207ENST00000537063 VGLL1Q99990 258 aa7.16□□□□□ -1.26
UBE3B-207ENST00000537063 SVEP1Q4LDE5 3571 aa7.16□□□□□ -1.26
UBE3B-207ENST00000537063 B4DSR2 109 aa7.16□□□□□ -1.26
UBE3B-207ENST00000537063 ARMS2P0C7Q2 107 aa7.16□□□□□ -1.26
UBE3B-207ENST00000537063 SLC25A16P16260 332 aa7.16□□□□□ -1.26
UBE3B-207ENST00000537063 PMCHP20382 165 aa7.16□□□□□ -1.26
UBE3B-207ENST00000537063 HLA-DMBP28068 263 aa7.16□□□□□ -1.26
UBE3B-207ENST00000537063 LCN12Q6JVE5 192 aa7.16□□□□□ -1.26
UBE3B-207ENST00000537063 TRAV8-2A0A0B4J237 113 aa7.16□□□□□ -1.26
UBE3B-207ENST00000537063 IGHV3-35A0A0C4DH35 117 aa7.16□□□□□ -1.26
UBE3B-207ENST00000537063 CFHR3Q02985 330 aa7.16□□□□□ -1.26
UBE3B-207ENST00000537063 RIGQ13278 110 aa7.16□□□□□ -1.26
UBE3B-207ENST00000537063 CYB5R2Q6BCY4 276 aa7.16□□□□□ -1.26
UBE3B-207ENST00000537063 CHCHD1Q96BP2 118 aaKnown RBP7.16□□□□□ -1.26
UBE3B-207ENST00000537063 FLNCQ14315 2725 aa7.16□□□□□ -1.26
UBE3B-207ENST00000537063 USP9XQ93008 2570 aaPredicted RBP7.15□□□□□ -1.26
UBE3B-207ENST00000537063 IGHV3OR16-8A0A075B7F1 116 aa7.15□□□□□ -1.26
UBE3B-207ENST00000537063 CTRLP40313 264 aa7.15□□□□□ -1.26
UBE3B-207ENST00000537063 METTL26Q96S19 204 aa7.15□□□□□ -1.26
UBE3B-207ENST00000537063 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.15□□□□□ -1.26
UBE3B-207ENST00000537063 C3orf79P0CE67 100 aa7.15□□□□□ -1.26
UBE3B-207ENST00000537063 PPP1R14DQ9NXH3 145 aa7.15□□□□□ -1.26
UBE3B-207ENST00000537063 ZFHX3Q15911 3703 aa7.15□□□□□ -1.26
UBE3B-207ENST00000537063 ZNF705FA8MVS1 300 aaPredicted RBP7.15□□□□□ -1.27
UBE3B-207ENST00000537063 H3BUX3 64 aa7.15□□□□□ -1.27
UBE3B-207ENST00000537063 AVPP01185 164 aa7.15□□□□□ -1.27
UBE3B-207ENST00000537063 IGLV1-40P01703 118 aa7.15□□□□□ -1.27
UBE3B-207ENST00000537063 TRGV3P03979 118 aa7.15□□□□□ -1.27
UBE3B-207ENST00000537063 IGLC6P0CF74 106 aa7.15□□□□□ -1.27
UBE3B-207ENST00000537063 ZNF705DP0CH99 300 aaPredicted RBP7.15□□□□□ -1.27
UBE3B-207ENST00000537063 ZNF705BP0CI00 300 aaPredicted RBP7.15□□□□□ -1.27
UBE3B-207ENST00000537063 ZNF80P51504 273 aaPredicted RBP7.15□□□□□ -1.27
UBE3B-207ENST00000537063 RPS20P60866 119 aaKnown RBP7.15□□□□□ -1.27
UBE3B-207ENST00000537063 FAM19A2Q8N3H0 131 aa7.15□□□□□ -1.27
UBE3B-207ENST00000537063 GLMPQ8WWB7 406 aa7.15□□□□□ -1.27
UBE3B-207ENST00000537063 USMG5Q96IX5 58 aa7.15□□□□□ -1.27
UBE3B-207ENST00000537063 MED13LQ71F56 2210 aa7.15□□□□□ -1.27
UBE3B-207ENST00000537063 USP24Q9UPU5 2620 aa7.15□□□□□ -1.27
UBE3B-207ENST00000537063 TMEM189A5PLL7 270 aa7.14□□□□□ -1.27
UBE3B-207ENST00000537063 FAM181BA6NEQ2 426 aa7.14□□□□□ -1.27
UBE3B-207ENST00000537063 PRB4P10163 310 aaPredicted RBP7.14□□□□□ -1.27
UBE3B-207ENST00000537063 TDRG1Q3Y452 100 aa7.14□□□□□ -1.27
UBE3B-207ENST00000537063 IGFL4Q6B9Z1 124 aa7.14□□□□□ -1.27
UBE3B-207ENST00000537063 HIF1ANQ9NWT6 349 aa7.14□□□□□ -1.27
UBE3B-207ENST00000537063 U3KQK5 164 aa7.14□□□□□ -1.27
UBE3B-207ENST00000537063 COL12A1Q99715 3063 aa7.14□□□□□ -1.27
UBE3B-207ENST00000537063 PRAC2D3DTV9 90 aa7.14□□□□□ -1.27
UBE3B-207ENST00000537063 NDUFA4O00483 81 aa7.14□□□□□ -1.27
UBE3B-207ENST00000537063 KRTDAPP60985 99 aa7.14□□□□□ -1.27
UBE3B-207ENST00000537063 SRSF1Q07955 248 aaKnown RBP eCLIP7.14□□□□□ -1.27
UBE3B-207ENST00000537063 Q8TAT8 98 aa7.14□□□□□ -1.27
UBE3B-207ENST00000537063 BBC3Q96PG8 261 aaPredicted RBP7.14□□□□□ -1.27
UBE3B-207ENST00000537063 UBR5O95071 2799 aaPredicted RBP7.14□□□□□ -1.27
UBE3B-207ENST00000537063 C2orf70A6NJV1 201 aa7.14□□□□□ -1.27
UBE3B-207ENST00000537063 HSBP1O75506 76 aa7.14□□□□□ -1.27
UBE3B-207ENST00000537063 BMI1P35226 326 aa7.14□□□□□ -1.27
UBE3B-207ENST00000537063 LBHQ53QV2 105 aaPredicted RBP7.14□□□□□ -1.27
UBE3B-207ENST00000537063 CNFNQ9BYD5 112 aa7.14□□□□□ -1.27
UBE3B-207ENST00000537063 ARL3P36405 182 aa7.13□□□□□ -1.27
UBE3B-207ENST00000537063 LINC01559Q495D7 138 aa7.13□□□□□ -1.27
UBE3B-207ENST00000537063 RNASEKQ6P5S7 137 aaKnown RBP7.13□□□□□ -1.27
UBE3B-207ENST00000537063 C8orf86Q6ZUL3 223 aa7.13□□□□□ -1.27
UBE3B-207ENST00000537063 CLEC5AQ9NY25 188 aa7.13□□□□□ -1.27
UBE3B-207ENST00000537063 PRR31Q5SQ13 230 aa7.13□□□□□ -1.27
UBE3B-207ENST00000537063 EBLN2Q6P2I7 272 aa7.13□□□□□ -1.27
UBE3B-207ENST00000537063 MRPL52Q86TS9 123 aaKnown RBP7.13□□□□□ -1.27
UBE3B-207ENST00000537063 RNF182Q8N6D2 247 aa7.13□□□□□ -1.27
UBE3B-207ENST00000537063 AKAP6Q13023 2319 aa7.13□□□□□ -1.27
UBE3B-207ENST00000537063 J3QLI3 93 aa7.13□□□□□ -1.27
UBE3B-207ENST00000537063 M0R2Z0 102 aa7.13□□□□□ -1.27
UBE3B-207ENST00000537063 CRXO43186 299 aaPredicted RBP7.13□□□□□ -1.27
UBE3B-207ENST00000537063 RAB4AP20338 218 aa7.13□□□□□ -1.27
UBE3B-207ENST00000537063 LY6EQ16553 131 aa7.13□□□□□ -1.27
UBE3B-207ENST00000537063 LYZL1Q6UWQ5 148 aa7.13□□□□□ -1.27
UBE3B-207ENST00000537063 LINC01356Q8N9X3 169 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms