RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 ZNF843Q8N446 348 aa10.53□□□□□ -0.72
SMG6-203ENST00000536871 NDFIP1Q9BT67 221 aa10.53□□□□□ -0.72
SMG6-203ENST00000536871 SMG1Q96Q15 3661 aaKnown RBP10.53□□□□□ -0.72
SMG6-203ENST00000536871 ZNF785A8K8V0 405 aa10.53□□□□□ -0.72
SMG6-203ENST00000536871 HAX1O00165 279 aa10.53□□□□□ -0.72
SMG6-203ENST00000536871 ZZEF1O43149 2961 aa10.53□□□□□ -0.72
SMG6-203ENST00000536871 SERF1AO75920 110 aa10.53□□□□□ -0.72
SMG6-203ENST00000536871 BMI1P35226 326 aa10.53□□□□□ -0.72
SMG6-203ENST00000536871 PTTG1IPP53801 180 aa10.53□□□□□ -0.72
SMG6-203ENST00000536871 TMEM219Q86XT9 240 aa10.53□□□□□ -0.72
SMG6-203ENST00000536871 BORCS7Q96B45 105 aa10.53□□□□□ -0.72
SMG6-203ENST00000536871 SAMD10Q9BYL1 202 aa10.53□□□□□ -0.72
SMG6-203ENST00000536871 UQCR10Q9UDW1 63 aa10.53□□□□□ -0.72
SMG6-203ENST00000536871 HRNRQ86YZ3 2850 aaPredicted RBP10.52□□□□□ -0.72
SMG6-203ENST00000536871 IGHV3OR16-10A0A075B7F0 116 aa10.52□□□□□ -0.73
SMG6-203ENST00000536871 A0A0G2JLM5 398 aa10.52□□□□□ -0.73
SMG6-203ENST00000536871 H3BUX3 64 aa10.52□□□□□ -0.73
SMG6-203ENST00000536871 TRGV3P03979 118 aa10.52□□□□□ -0.73
SMG6-203ENST00000536871 SRIP30626 198 aa10.52□□□□□ -0.73
SMG6-203ENST00000536871 SRSF2Q01130 221 aaKnown RBP10.52□□□□□ -0.73
SMG6-203ENST00000536871 RIGQ13278 110 aa10.52□□□□□ -0.73
SMG6-203ENST00000536871 LINC00322Q6ZN03 302 aaPredicted RBP10.52□□□□□ -0.73
SMG6-203ENST00000536871 LRRC75A-AS1Q8N1F1 130 aa10.52□□□□□ -0.73
SMG6-203ENST00000536871 SIGLECL1Q8N7X8 197 aa10.52□□□□□ -0.73
SMG6-203ENST00000536871 RNASE8Q8TDE3 154 aaKnown RBP10.52□□□□□ -0.73
SMG6-203ENST00000536871 KCNS1Q96KK3 526 aa10.52□□□□□ -0.73
SMG6-203ENST00000536871 BEX4Q9NWD9 120 aaPredicted RBP10.52□□□□□ -0.73
SMG6-203ENST00000536871 TP53TG3Q9ULZ0 132 aa10.52□□□□□ -0.73
SMG6-203ENST00000536871 LOXL1Q08397 574 aaPredicted RBP10.51□□□□□ -0.73
SMG6-203ENST00000536871 ZC2HC1AQ96GY0 325 aa10.51□□□□□ -0.73
SMG6-203ENST00000536871 U3KQE9 123 aa10.51□□□□□ -0.73
SMG6-203ENST00000536871 ITPR1Q14643 2758 aa10.51□□□□□ -0.73
SMG6-203ENST00000536871 A0A1B0GUT8 65 aa10.51□□□□□ -0.73
SMG6-203ENST00000536871 M0R3E3 92 aa10.51□□□□□ -0.73
SMG6-203ENST00000536871 NDUFA4O00483 81 aa10.51□□□□□ -0.73
SMG6-203ENST00000536871 CHEK1O14757 476 aa10.51□□□□□ -0.73
SMG6-203ENST00000536871 FRMD6-AS1P0C7T7 363 aa10.51□□□□□ -0.73
SMG6-203ENST00000536871 GTSF1Q8WW33 167 aa10.51□□□□□ -0.73
SMG6-203ENST00000536871 SMAD5-AS1Q9Y6J3 95 aa10.51□□□□□ -0.73
SMG6-203ENST00000536871 LINC01548A6NM66 108 aa10.5□□□□□ -0.73
SMG6-203ENST00000536871 PPIFP30405 207 aaKnown RBP10.5□□□□□ -0.73
SMG6-203ENST00000536871 SLAQ13239 276 aa10.5□□□□□ -0.73
SMG6-203ENST00000536871 TCF24Q7RTU0 167 aa10.5□□□□□ -0.73
SMG6-203ENST00000536871 BCL6BQ8N143 479 aaPredicted RBP10.5□□□□□ -0.73
SMG6-203ENST00000536871 KLHDC1Q8N7A1 406 aa10.5□□□□□ -0.73
SMG6-203ENST00000536871 GATD1Q8NB37 220 aa10.5□□□□□ -0.73
SMG6-203ENST00000536871 ZNF738Q8NE65 137 aa10.5□□□□□ -0.73
SMG6-203ENST00000536871 A0A1W2PS18 150 aa10.49□□□□□ -0.73
SMG6-203ENST00000536871 TMEM89A2RUT3 159 aa10.49□□□□□ -0.73
SMG6-203ENST00000536871 SH2D7A6NKC9 451 aaPredicted RBP10.49□□□□□ -0.73
SMG6-203ENST00000536871 HSBP1L1C9JCN9 74 aa10.49□□□□□ -0.73
SMG6-203ENST00000536871 CIDEAO60543 219 aa10.49□□□□□ -0.73
SMG6-203ENST00000536871 CTRLP40313 264 aa10.49□□□□□ -0.73
SMG6-203ENST00000536871 CAMPP49913 170 aa10.49□□□□□ -0.73
SMG6-203ENST00000536871 LCN12Q6JVE5 192 aa10.49□□□□□ -0.73
SMG6-203ENST00000536871 PGLYRP4Q96LB8 373 aa10.49□□□□□ -0.73
SMG6-203ENST00000536871 PRR25Q96S07 402 aa10.49□□□□□ -0.73
SMG6-203ENST00000536871 DOPEY1Q5JWR5 2465 aa10.49□□□□□ -0.73
SMG6-203ENST00000536871 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.49□□□□□ -0.73
SMG6-203ENST00000536871 CLPSL1A2RUU4 121 aa10.49□□□□□ -0.73
SMG6-203ENST00000536871 GPX1P07203 203 aa10.49□□□□□ -0.73
SMG6-203ENST00000536871 ARL3P36405 182 aa10.49□□□□□ -0.73
SMG6-203ENST00000536871 C18orf32Q8TCD1 76 aa10.49□□□□□ -0.73
SMG6-203ENST00000536871 ALKBH7Q9BT30 221 aaPredicted RBP10.49□□□□□ -0.73
SMG6-203ENST00000536871 MRPS16Q9Y3D3 137 aaKnown RBP10.49□□□□□ -0.73
SMG6-203ENST00000536871 TMEM189A5PLL7 270 aa10.48□□□□□ -0.73
SMG6-203ENST00000536871 CCL25O15444 150 aa10.48□□□□□ -0.73
SMG6-203ENST00000536871 NUPR1O60356 82 aa10.48□□□□□ -0.73
SMG6-203ENST00000536871 ZNF324O75467 553 aaPredicted RBP10.48□□□□□ -0.73
SMG6-203ENST00000536871 LINC00310P59036 64 aa10.48□□□□□ -0.73
SMG6-203ENST00000536871 KIAA1644Q3SXP7 199 aa10.48□□□□□ -0.73
SMG6-203ENST00000536871 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.48□□□□□ -0.73
SMG6-203ENST00000536871 Q6ZWC4 215 aa10.48□□□□□ -0.73
SMG6-203ENST00000536871 LAMTOR2Q9Y2Q5 125 aa10.48□□□□□ -0.73
SMG6-203ENST00000536871 COX11Q9Y6N1 276 aa10.48□□□□□ -0.73
SMG6-203ENST00000536871 A0A096LNT2 108 aa10.47□□□□□ -0.73
SMG6-203ENST00000536871 LY6EQ16553 131 aa10.47□□□□□ -0.73
SMG6-203ENST00000536871 BBC3Q96PG8 261 aaPredicted RBP10.47□□□□□ -0.73
SMG6-203ENST00000536871 RELNP78509 3460 aa10.47□□□□□ -0.73
SMG6-203ENST00000536871 A0A1B0GUS0 222 aa10.47□□□□□ -0.73
SMG6-203ENST00000536871 IGLV1-40P01703 118 aa10.47□□□□□ -0.73
SMG6-203ENST00000536871 PRB1P04280 392 aa10.47□□□□□ -0.73
SMG6-203ENST00000536871 AMTP48728 403 aa10.47□□□□□ -0.73
SMG6-203ENST00000536871 GDF5OSQ5U4N7 250 aa10.47□□□□□ -0.73
SMG6-203ENST00000536871 SAMD13Q5VXD3 122 aa10.47□□□□□ -0.73
SMG6-203ENST00000536871 C9orf139Q6ZV77 190 aa10.47□□□□□ -0.73
SMG6-203ENST00000536871 CHCHD1Q96BP2 118 aaKnown RBP10.47□□□□□ -0.73
SMG6-203ENST00000536871 PAM16Q9Y3D7 125 aa10.47□□□□□ -0.73
SMG6-203ENST00000536871 WNK2Q9Y3S1 2297 aa10.46□□□□□ -0.73
SMG6-203ENST00000536871 HSBP1O75506 76 aa10.46□□□□□ -0.74
SMG6-203ENST00000536871 APOHP02749 345 aaPredicted RBP10.46□□□□□ -0.74
SMG6-203ENST00000536871 PMCHP20382 165 aa10.46□□□□□ -0.74
SMG6-203ENST00000536871 CRIP1P50238 77 aa10.46□□□□□ -0.74
SMG6-203ENST00000536871 ASCL2Q99929 193 aa10.46□□□□□ -0.74
SMG6-203ENST00000536871 IGKV2-40A0A087WW87 121 aaPredicted RBP10.45□□□□□ -0.74
SMG6-203ENST00000536871 IGHV3-35A0A0C4DH35 117 aa10.45□□□□□ -0.74
SMG6-203ENST00000536871 FABP5P3A8MUU1 101 aa10.45□□□□□ -0.74
SMG6-203ENST00000536871 SH2D1AO60880 128 aa10.45□□□□□ -0.74
SMG6-203ENST00000536871 IGKV2D-40P01614 121 aaPredicted RBP10.45□□□□□ -0.74
SMG6-203ENST00000536871 TEX29Q8N6K0 151 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms