RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 M0R233 179 aa1.32□□□□□ -2.2
VBP1-203ENST00000535916 UQCRQO14949 82 aa1.32□□□□□ -2.2
VBP1-203ENST00000535916 SLC25A5P05141 298 aaKnown RBP1.32□□□□□ -2.2
VBP1-203ENST00000535916 CCL4P13236 92 aa1.32□□□□□ -2.2
VBP1-203ENST00000535916 KDELR1P24390 212 aa1.32□□□□□ -2.2
VBP1-203ENST00000535916 MRPS36P82909 103 aaKnown RBP1.32□□□□□ -2.2
VBP1-203ENST00000535916 HSD17B12Q53GQ0 312 aa1.32□□□□□ -2.2
VBP1-203ENST00000535916 KRTAP26-1Q6PEX3 210 aa1.32□□□□□ -2.2
VBP1-203ENST00000535916 Q6ZRN7 208 aaPredicted RBP1.32□□□□□ -2.2
VBP1-203ENST00000535916 OR5D14Q8NGL3 314 aa1.32□□□□□ -2.2
VBP1-203ENST00000535916 OR4C6Q8NH72 309 aa1.32□□□□□ -2.2
VBP1-203ENST00000535916 RNASE11Q8TAA1 199 aaKnown RBP1.32□□□□□ -2.2
VBP1-203ENST00000535916 PSMF1Q92530 271 aa1.32□□□□□ -2.2
VBP1-203ENST00000535916 MUCL1Q96DR8 90 aa1.32□□□□□ -2.2
VBP1-203ENST00000535916 BANF2Q9H503 90 aa1.32□□□□□ -2.2
VBP1-203ENST00000535916 CHCHD2Q9Y6H1 151 aaPredicted RBP1.32□□□□□ -2.2
VBP1-203ENST00000535916 SYNJ1O43426 1573 aa1.32□□□□□ -2.2
VBP1-203ENST00000535916 PLXNA3P51805 1871 aa1.32□□□□□ -2.2
VBP1-203ENST00000535916 CCDC171Q6TFL3 1326 aa1.32□□□□□ -2.2
VBP1-203ENST00000535916 CACNA1GO43497 2377 aa1.32□□□□□ -2.2
VBP1-203ENST00000535916 MYOM3Q5VTT5 1437 aa1.32□□□□□ -2.2
VBP1-203ENST00000535916 E7EUB6 86 aa1.31□□□□□ -2.2
VBP1-203ENST00000535916 SAA1P0DJI8 122 aaPredicted RBP1.31□□□□□ -2.2
VBP1-203ENST00000535916 RNASE3P12724 160 aaKnown RBP1.31□□□□□ -2.2
VBP1-203ENST00000535916 DNAJB13P59910 316 aa1.31□□□□□ -2.2
VBP1-203ENST00000535916 SPCS2Q15005 226 aa1.31□□□□□ -2.2
VBP1-203ENST00000535916 HAGHLQ6PII5 290 aaPredicted RBP1.31□□□□□ -2.2
VBP1-203ENST00000535916 ZNF833PQ6ZTB9 187 aa1.31□□□□□ -2.2
VBP1-203ENST00000535916 ARPINQ7Z6K5 226 aa1.31□□□□□ -2.2
VBP1-203ENST00000535916 TSTD1Q8NFU3 115 aa1.31□□□□□ -2.2
VBP1-203ENST00000535916 OR2T35Q8NGX2 323 aa1.31□□□□□ -2.2
VBP1-203ENST00000535916 TMEM254Q8TBM7 123 aa1.31□□□□□ -2.2
VBP1-203ENST00000535916 SFT2D1Q8WV19 159 aa1.31□□□□□ -2.2
VBP1-203ENST00000535916 CLEC2BQ92478 149 aa1.31□□□□□ -2.2
VBP1-203ENST00000535916 MAGOHBQ96A72 148 aaKnown RBP1.31□□□□□ -2.2
VBP1-203ENST00000535916 RAB37Q96AX2 223 aa1.31□□□□□ -2.2
VBP1-203ENST00000535916 ERG28Q9UKR5 140 aa1.31□□□□□ -2.2
VBP1-203ENST00000535916 COL11A1P12107 1806 aaPredicted RBP1.31□□□□□ -2.2
VBP1-203ENST00000535916 PHLPP1O60346 1717 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 COL5A3P25940 1745 aaPredicted RBP1.3□□□□□ -2.2
VBP1-203ENST00000535916 TRAV27A0A087WT01 109 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 OR2T8A6NH00 312 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 C5orf67F2Z3F1 127 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 LYRM1O43325 122 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 NCR2O95944 276 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 HBDP02042 147 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 IGLC6P0CF74 106 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 AKR1D1P51857 326 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 NCS1P62166 190 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 CDK6Q00534 326 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 TMEM91Q6ZNR0 172 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 FP248Q71RG6 208 aaPredicted RBP1.3□□□□□ -2.2
VBP1-203ENST00000535916 LINC00269Q8N2A0 174 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 AP1S3Q96PC3 154 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 OR4C12Q96R67 309 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 VPS25Q9BRG1 176 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 GGACTQ9BVM4 153 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 LPAR5Q9H1C0 372 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 TMEM106BQ9NUM4 274 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 TNFSF18Q9UNG2 199 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 TPRKBQ9Y3C4 175 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 EML6Q6ZMW3 1958 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 BCL9LQ86UU0 1499 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 WDR7Q9Y4E6 1490 aa1.3□□□□□ -2.2
VBP1-203ENST00000535916 MYLKQ15746 1914 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 TRAV10A0A0B4J240 114 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 TCRBV4S1A1TA0A5B7 111 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 F8W036 122 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 M0R2Z0 102 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 SULT1C4O75897 302 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 LINC00694P0DN24 101 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 TPT1P13693 172 aaKnown RBP1.29□□□□□ -2.2
VBP1-203ENST00000535916 HLA-DRB4P13762 266 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 BRS3P32247 399 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 KRTAP12-1P59990 96 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 SNRPD3P62318 126 aaKnown RBP1.29□□□□□ -2.2
VBP1-203ENST00000535916 RPS25P62851 125 aaKnown RBP1.29□□□□□ -2.2
VBP1-203ENST00000535916 C1orf137Q5JT78 98 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 C10orf55Q5SWW7 151 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 RPL13AP3Q6NVV1 102 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 OR5AS1Q8N127 324 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 FAM19A2Q8N3H0 131 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 Q8TAT8 98 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 C1orf54Q8WWF1 131 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 FKBP11Q9NYL4 201 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 CALML5Q9NZT1 146 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 HLA-DRB4X5D2U9 266 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 MYO9BQ13459 2157 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 ERBINQ96RT1 1412 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 GRIN2AQ12879 1464 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 MYO5AQ9Y4I1 1855 aaKnown RBP1.29□□□□□ -2.2
VBP1-203ENST00000535916 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
VBP1-203ENST00000535916 PTPRBP23467 1997 aa1.28□□□□□ -2.2
VBP1-203ENST00000535916 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.28□□□□□ -2.2
VBP1-203ENST00000535916 LOC107986453A0A1B0GWG9 222 aa1.28□□□□□ -2.2
VBP1-203ENST00000535916 C9orf170A2RU37 121 aa1.28□□□□□ -2.2
VBP1-203ENST00000535916 CCDC160A6NGH7 325 aa1.28□□□□□ -2.2
VBP1-203ENST00000535916 A6NN06 94 aa1.28□□□□□ -2.2
VBP1-203ENST00000535916 ERC2-IT1O76042 136 aa1.28□□□□□ -2.2
VBP1-203ENST00000535916 TRACP01848 142 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms